RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 ORMDL2Q53FV1 153 aa8.47□□□□□ -1.05
CLSTN3-208ENST00000538933 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
CLSTN3-208ENST00000538933 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
CLSTN3-208ENST00000538933 NIT1Q86X76 327 aa8.47□□□□□ -1.05
CLSTN3-208ENST00000538933 TMEM18Q96B42 140 aa8.47□□□□□ -1.05
CLSTN3-208ENST00000538933 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
CLSTN3-208ENST00000538933 TRBV6-8A0A0A6YYG3 113 aa8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 HSBP1O75506 76 aa8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 TSHBP01222 138 aa8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 G0S2P27469 103 aa8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 LELP1Q5T871 98 aa8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 LYPD5Q6UWN5 251 aa8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 CHCHD1Q96BP2 118 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
CLSTN3-208ENST00000538933 TMEM262E9PQX1 116 aa8.45□□□□□ -1.06
CLSTN3-208ENST00000538933 TIRAPP58753 221 aa8.45□□□□□ -1.06
CLSTN3-208ENST00000538933 SMAGPQ0VAQ4 97 aa8.45□□□□□ -1.06
CLSTN3-208ENST00000538933 ESRGQ1W209 222 aa8.45□□□□□ -1.06
CLSTN3-208ENST00000538933 SERF1AO75920 110 aa8.44□□□□□ -1.06
CLSTN3-208ENST00000538933 PKIAP61925 76 aa8.44□□□□□ -1.06
CLSTN3-208ENST00000538933 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
CLSTN3-208ENST00000538933 UPK3BQ9BT76 320 aa8.44□□□□□ -1.06
CLSTN3-208ENST00000538933 TMA7Q9Y2S6 64 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-208ENST00000538933 NTM-AS1Q6ZSK4 140 aa8.43□□□□□ -1.06
CLSTN3-208ENST00000538933 CYSLTR1Q9Y271 337 aa8.43□□□□□ -1.06
CLSTN3-208ENST00000538933 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-208ENST00000538933 A0A087WX48 190 aa8.42□□□□□ -1.06
CLSTN3-208ENST00000538933 IGKV2-29A2NJV5 120 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-208ENST00000538933 HAMPP81172 84 aa8.42□□□□□ -1.06
CLSTN3-208ENST00000538933 GAGE6Q13070 117 aa8.42□□□□□ -1.06
CLSTN3-208ENST00000538933 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
CLSTN3-208ENST00000538933 MRPS16Q9Y3D3 137 aaKnown RBP8.42□□□□□ -1.06
CLSTN3-208ENST00000538933 LINC01549A6NIU2 74 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 H7C423 109 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 HBDP02042 147 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 PMCHL1Q16048 86 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 C2orf66Q6UXQ4 117 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 URB1-AS1Q96HZ7 61 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 CHCHD7Q9BUK0 85 aa8.41□□□□□ -1.06
CLSTN3-208ENST00000538933 LINC01546A6NGU7 62 aa8.4□□□□□ -1.06
CLSTN3-208ENST00000538933 ESDP10768 282 aa8.4□□□□□ -1.06
CLSTN3-208ENST00000538933 S100A2P29034 98 aa8.4□□□□□ -1.06
CLSTN3-208ENST00000538933 PLA2G2DQ9UNK4 145 aa8.4□□□□□ -1.06
CLSTN3-208ENST00000538933 LRP2P98164 4655 aa8.39□□□□□ -1.07
CLSTN3-208ENST00000538933 FGF6P10767 208 aa8.39□□□□□ -1.07
CLSTN3-208ENST00000538933 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
CLSTN3-208ENST00000538933 PDZD11Q5EBL8 140 aa8.39□□□□□ -1.07
CLSTN3-208ENST00000538933 WFDC10BQ8IUB3 73 aa8.39□□□□□ -1.07
CLSTN3-208ENST00000538933 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
CLSTN3-208ENST00000538933 OR5A1Q8NGJ0 315 aa8.39□□□□□ -1.07
CLSTN3-208ENST00000538933 SCGB3A1Q96QR1 104 aa8.39□□□□□ -1.07
CLSTN3-208ENST00000538933 A0A087WTM6 91 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 EREGO14944 169 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 SIVA1O15304 175 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 DNAH10OSP0CZ25 163 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 ZNF25P17030 456 aaPredicted RBP8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 SPANXA1Q9NS26 97 aa8.38□□□□□ -1.07
CLSTN3-208ENST00000538933 NUPR1O60356 82 aa8.37□□□□□ -1.07
CLSTN3-208ENST00000538933 GCSHP23434 173 aa8.37□□□□□ -1.07
CLSTN3-208ENST00000538933 LINC00310P59036 64 aa8.37□□□□□ -1.07
CLSTN3-208ENST00000538933 Q6ZN92 141 aa8.37□□□□□ -1.07
CLSTN3-208ENST00000538933 TRAV9-2A0A087WT02 112 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 ATP5LO75964 103 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 LEPROTL1O95214 131 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 ANGP03950 147 aaKnown RBP8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 FABP4P15090 132 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 SNRPEP62304 92 aaKnown RBP8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 MPV17L2Q567V2 206 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 TIMM21Q9BVV7 248 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 HSPB8Q9UJY1 196 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 UBE2D4Q9Y2X8 147 aa8.36□□□□□ -1.07
CLSTN3-208ENST00000538933 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
CLSTN3-208ENST00000538933 CRPP02741 224 aa8.35□□□□□ -1.07
CLSTN3-208ENST00000538933 RBX1P62877 108 aa8.35□□□□□ -1.07
CLSTN3-208ENST00000538933 LINC01556Q5JQF7 62 aa8.35□□□□□ -1.07
CLSTN3-208ENST00000538933 ERASQ7Z444 233 aa8.35□□□□□ -1.07
CLSTN3-208ENST00000538933 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
CLSTN3-208ENST00000538933 Q8N976 141 aa8.35□□□□□ -1.07
CLSTN3-208ENST00000538933 TMEM141Q96I45 108 aa8.35□□□□□ -1.07
CLSTN3-208ENST00000538933 A0A096LNJ9 63 aa8.34□□□□□ -1.07
CLSTN3-208ENST00000538933 IGKV3OR2-268A0A0C4DH90 116 aa8.34□□□□□ -1.07
CLSTN3-208ENST00000538933 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
CLSTN3-208ENST00000538933 C10orf126Q8N4M7 172 aa8.34□□□□□ -1.07
CLSTN3-208ENST00000538933 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
CLSTN3-208ENST00000538933 C2orf88Q9BSF0 95 aa8.34□□□□□ -1.07
CLSTN3-208ENST00000538933 PYGO1Q9Y3Y4 419 aa8.34□□□□□ -1.07
CLSTN3-208ENST00000538933 PRSS1P07477 247 aa8.33□□□□□ -1.08
CLSTN3-208ENST00000538933 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
CLSTN3-208ENST00000538933 Q6ZUT4 128 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms