RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 RNASE13Q5GAN3 156 aaKnown RBP15.87■□□□□ 0.13
TMEM260-202ENST00000538838 CLPSL2Q6UWE3 100 aa15.87■□□□□ 0.13
TMEM260-202ENST00000538838 FAM104AQ969W3 186 aa15.87■□□□□ 0.13
TMEM260-202ENST00000538838 IGIPA6NJ69 53 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 SCGB3A1Q96QR1 104 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 PYGO1Q9Y3Y4 419 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 SACSQ9NZJ4 4579 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 TRAV9-2A0A087WT02 112 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 TTC32Q5I0X7 151 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 LINC00269Q8N2A0 174 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 C10orf126Q8N4M7 172 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 CDC42SE2Q9NRR3 84 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 DNAH6Q9C0G6 4158 aa15.86■□□□□ 0.13
TMEM260-202ENST00000538838 KMT2AQ03164 3969 aa15.85■□□□□ 0.13
TMEM260-202ENST00000538838 IGLV4-3A0A075B6K6 122 aa15.85■□□□□ 0.13
TMEM260-202ENST00000538838 PDZD11Q5EBL8 140 aa15.85■□□□□ 0.13
TMEM260-202ENST00000538838 ERASQ7Z444 233 aa15.84■□□□□ 0.13
TMEM260-202ENST00000538838 ZNF664Q8N3J9 261 aa15.84■□□□□ 0.13
TMEM260-202ENST00000538838 TIMM17AQ99595 171 aa15.84■□□□□ 0.13
TMEM260-202ENST00000538838 LINC01549A6NIU2 74 aa15.83■□□□□ 0.13
TMEM260-202ENST00000538838 K7EP13 123 aa15.83■□□□□ 0.13
TMEM260-202ENST00000538838 KMT2CQ8NEZ4 4911 aaKnown RBP15.83■□□□□ 0.13
TMEM260-202ENST00000538838 HYDINQ4G0P3 5121 aa15.83■□□□□ 0.12
TMEM260-202ENST00000538838 IBA57-AS1B1ANH7 110 aa15.83■□□□□ 0.12
TMEM260-202ENST00000538838 MRPS36P82909 103 aaKnown RBP15.83■□□□□ 0.12
TMEM260-202ENST00000538838 UBE2WQ96B02 151 aa15.83■□□□□ 0.12
TMEM260-202ENST00000538838 IGKV3OR2-268A0A0C4DH90 116 aa15.82■□□□□ 0.12
TMEM260-202ENST00000538838 ENHOQ6UWT2 76 aa15.82■□□□□ 0.12
TMEM260-202ENST00000538838 Q6ZR54 194 aa15.82■□□□□ 0.12
TMEM260-202ENST00000538838 TMEM141Q96I45 108 aa15.82■□□□□ 0.12
TMEM260-202ENST00000538838 PRR34Q9NV39 138 aa15.82■□□□□ 0.12
TMEM260-202ENST00000538838 CRPP02741 224 aa15.81■□□□□ 0.12
TMEM260-202ENST00000538838 S100A6P06703 90 aa15.81■□□□□ 0.12
TMEM260-202ENST00000538838 REG3AQ06141 175 aa15.81■□□□□ 0.12
TMEM260-202ENST00000538838 TMA7Q9Y2S6 64 aaKnown RBP15.81■□□□□ 0.12
TMEM260-202ENST00000538838 LINC00173Q6ZV60 143 aa15.8■□□□□ 0.12
TMEM260-202ENST00000538838 Q9HAA7 133 aa15.8■□□□□ 0.12
TMEM260-202ENST00000538838 ZC2HC1BQ5TFG8 222 aa15.79■□□□□ 0.12
TMEM260-202ENST00000538838 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.79■□□□□ 0.12
TMEM260-202ENST00000538838 NPSP0C0P6 89 aa15.79■□□□□ 0.12
TMEM260-202ENST00000538838 Q6ZN92 141 aa15.79■□□□□ 0.12
TMEM260-202ENST00000538838 LEPROTL1O95214 131 aa15.78■□□□□ 0.12
TMEM260-202ENST00000538838 FABP4P15090 132 aa15.78■□□□□ 0.12
TMEM260-202ENST00000538838 ATP5LO75964 103 aa15.77■□□□□ 0.12
TMEM260-202ENST00000538838 TEX43Q6ZNM6 134 aa15.76■□□□□ 0.11
TMEM260-202ENST00000538838 BAALCQ8WXS3 180 aa15.76■□□□□ 0.11
TMEM260-202ENST00000538838 IFITM10A6NMD0 228 aa15.76■□□□□ 0.11
TMEM260-202ENST00000538838 AMELXQ99217 191 aa15.76■□□□□ 0.11
TMEM260-202ENST00000538838 VCX2Q9H322 139 aa15.76■□□□□ 0.11
TMEM260-202ENST00000538838 RYR2Q92736 4967 aa15.75■□□□□ 0.11
TMEM260-202ENST00000538838 IGLV10-54A0A075B6I4 117 aa15.75■□□□□ 0.11
TMEM260-202ENST00000538838 TRAV8-3A0A0A6YYJ7 113 aa15.75■□□□□ 0.11
TMEM260-202ENST00000538838 SNRPEP62304 92 aaKnown RBP15.75■□□□□ 0.11
TMEM260-202ENST00000538838 MIAQ16674 131 aa15.75■□□□□ 0.11
TMEM260-202ENST00000538838 PAPPA-AS1Q5QFB9 102 aa15.75■□□□□ 0.11
TMEM260-202ENST00000538838 HIST3H2BBQ8N257 126 aa15.75■□□□□ 0.11
TMEM260-202ENST00000538838 IFI27L1Q96BM0 104 aa15.75■□□□□ 0.11
TMEM260-202ENST00000538838 TRAV13-1A0A0B4J241 112 aa15.74■□□□□ 0.11
TMEM260-202ENST00000538838 LINC00959A0A1B0GUT2 108 aa15.73■□□□□ 0.11
TMEM260-202ENST00000538838 HSPB8Q9UJY1 196 aa15.73■□□□□ 0.11
TMEM260-202ENST00000538838 C2orf88Q9BSF0 95 aa15.72■□□□□ 0.11
TMEM260-202ENST00000538838 IGKV2D-24A0A075B6R9 120 aa15.72■□□□□ 0.11
TMEM260-202ENST00000538838 C5orf52A6NGY3 159 aa15.72■□□□□ 0.11
TMEM260-202ENST00000538838 PMVKQ15126 192 aa15.71■□□□□ 0.11
TMEM260-202ENST00000538838 C6orf223Q8N319 242 aa15.71■□□□□ 0.11
TMEM260-202ENST00000538838 C1orf43Q9BWL3 253 aa15.7■□□□□ 0.1
TMEM260-202ENST00000538838 CST9LQ9H4G1 147 aa15.7■□□□□ 0.1
TMEM260-202ENST00000538838 TRAV8-4A0A0B4J246 113 aa15.69■□□□□ 0.1
TMEM260-202ENST00000538838 PRSS1P07477 247 aa15.69■□□□□ 0.1
TMEM260-202ENST00000538838 SS18Q15532 418 aa15.69■□□□□ 0.1
TMEM260-202ENST00000538838 PRSS29PA6NIE9 313 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 H0Y8G0 127 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 CCL25O15444 150 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 S100A2P29034 98 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 UBE2D1P51668 147 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 CHCHD10Q8WYQ3 142 aaPredicted RBP15.68■□□□□ 0.1
TMEM260-202ENST00000538838 DNAH10Q8IVF4 4471 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 XCL1P47992 114 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 C1orf134Q5TEV5 83 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 RMI2Q96E14 147 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 PACRGQ96M98 296 aaPredicted RBP15.68■□□□□ 0.1
TMEM260-202ENST00000538838 HIST1H2BLQ99880 126 aa15.68■□□□□ 0.1
TMEM260-202ENST00000538838 DNAH2Q9P225 4427 aa15.67■□□□□ 0.1
TMEM260-202ENST00000538838 KRTAP26-1Q6PEX3 210 aa15.67■□□□□ 0.1
TMEM260-202ENST00000538838 Q6ZRN7 208 aaPredicted RBP15.67■□□□□ 0.1
TMEM260-202ENST00000538838 NFE4Q86UQ8 179 aa15.67■□□□□ 0.1
TMEM260-202ENST00000538838 GAGE12HA6NDE8 117 aa15.65■□□□□ 0.1
TMEM260-202ENST00000538838 LINC00242Q5T6M2 205 aa15.65■□□□□ 0.1
TMEM260-202ENST00000538838 MAP1LC3CQ9BXW4 147 aa15.65■□□□□ 0.1
TMEM260-202ENST00000538838 A0A0J9YXV3 536 aa15.64■□□□□ 0.09
TMEM260-202ENST00000538838 TRAV12-1A0A0B4J245 112 aa15.63■□□□□ 0.09
TMEM260-202ENST00000538838 TM2D2Q9BX73 214 aa15.63■□□□□ 0.09
TMEM260-202ENST00000538838 FOXI1Q12951 378 aa15.62■□□□□ 0.09
TMEM260-202ENST00000538838 PSCAO43653 123 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 COX6A2Q02221 97 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 FAM19A3Q7Z5A8 133 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 MAPKAPK5-AS1Q8N8E1 139 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 CHTOPQ9Y3Y2 248 aaKnown RBP15.61■□□□□ 0.09
TMEM260-202ENST00000538838 COX11Q9Y6N1 276 aa15.61■□□□□ 0.09
TMEM260-202ENST00000538838 IGLV4-69A0A075B6H9 119 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms