RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 LRP2P98164 4655 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 IGLV4-60A0A075B6I1 120 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 IGKV2-24A0A0C4DH68 120 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 A0A0U1RQV1 116 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 F2Z2F3 143 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 H7C423 109 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 MGPP08493 103 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 TRGC1P0CF51 173 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 SSTP61278 116 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 AMMECR1LQ6DCA0 310 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 RPL7L1Q6DKI1 246 aaKnown RBP3.31□□□□□ -1.88
SNHG1-207ENST00000537965 LYPD6BQ8NI32 183 aa3.31□□□□□ -1.88
SNHG1-207ENST00000537965 TNXBP22105 4242 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 GVQW2A0A096LPI5 108 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-207ENST00000537965 MUC21A0A0G2JKD1 596 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 NCR2O95944 276 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 GIPP09681 153 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-207ENST00000537965 NKX2-5P52952 324 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-207ENST00000537965 IFITM3Q01628 133 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 SRSF9Q13242 221 aaKnown RBP eCLIP3.3□□□□□ -1.88
SNHG1-207ENST00000537965 TMUB2Q71RG4 321 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 ZNF664Q8N3J9 261 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 C15orf56Q8N910 161 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 FER1L6-AS1Q8NA97 138 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 FAM210AQ96ND0 272 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 BIN3Q9NQY0 253 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 PSORS1C2Q9UIG4 136 aa3.3□□□□□ -1.88
SNHG1-207ENST00000537965 FXYD6-FXYD2A0A087WZ82 144 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 IGHV1-58A0A0C4DH39 117 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 IGKV3OR2-268A0A0C4DH90 116 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 C5orf52A6NGY3 159 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 UMAD1C9J7I0 102 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 ZNF25P17030 456 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-207ENST00000537965 PNRC1Q12796 327 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-207ENST00000537965 HIGD2BQ4VC39 106 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 RNASEKQ6P5S7 137 aaKnown RBP3.29□□□□□ -1.88
SNHG1-207ENST00000537965 TEX261Q6UWH6 196 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 SMIM15Q7Z3B0 74 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 OCC1Q8TAD7 63 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 SFT2D1Q8WV19 159 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 CHCHD10Q8WYQ3 142 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-207ENST00000537965 ISOC2Q96AB3 205 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 SMIM12Q96EX1 92 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 BTF3L4Q96K17 158 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 GFRA4Q9GZZ7 299 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 ALG5Q9Y673 324 aa3.29□□□□□ -1.88
SNHG1-207ENST00000537965 A0A096LNI7 61 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 TRAV26-2A0A0B4J265 109 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 LOC107984640A0A0U1RRK4 108 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 IFNA1P01562 189 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 IGLC6P0CF74 106 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 NTF3P20783 257 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 SS18Q15532 418 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 KCNRGQ8N5I3 272 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 OR2D3Q8NGH3 330 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 OR5A1Q8NGJ0 315 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 TSKUQ8WUA8 353 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 MBD3L1Q8WWY6 194 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 TMEM101Q96IK0 257 aa3.28□□□□□ -1.88
SNHG1-207ENST00000537965 TEX46H3BTG2 121 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 CCL25O15444 150 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 APCSP02743 223 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 MT-ND6P03923 174 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 FGF6P10767 208 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 RPL35P42766 123 aaKnown RBP3.27□□□□□ -1.89
SNHG1-207ENST00000537965 EIF5AP63241 154 aaKnown RBP3.27□□□□□ -1.89
SNHG1-207ENST00000537965 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 SMAGPQ0VAQ4 97 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 EIF5AL1Q6IS14 154 aaKnown RBP3.27□□□□□ -1.89
SNHG1-207ENST00000537965 C9orf62Q8N4C0 152 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 DIRC1Q969H9 104 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 MANBALQ9NQG1 85 aa3.27□□□□□ -1.89
SNHG1-207ENST00000537965 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 IGLV4-69A0A075B6H9 119 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 LINC00959A0A1B0GUT2 108 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 PMCHP20382 165 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 XCL1P47992 114 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 GNG4P50150 75 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 Q5BKY6 102 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 CD164L2Q6UWJ8 174 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 LYZL1Q6UWQ5 148 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 FAM213BQ8TBF2 198 aa3.26□□□□□ -1.89
SNHG1-207ENST00000537965 IGLV1-50A0A075B6I6 118 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 TRAV1-1A0A0B4J248 108 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 C19orf71A6NCJ1 209 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 C1orf196B1AJZ1 125 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 F8WDY8 70 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 I3L3M4 83 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 ARPC5O15511 151 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 PDE6DO43924 150 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 APOMO95445 188 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 CCL20P78556 96 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 ZNF345Q14585 488 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 LBHQ53QV2 105 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-207ENST00000537965 CENPWQ5EE01 88 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 GATD1Q8NB37 220 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 C11orf52Q96A22 123 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms