RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 CEMP1Q6PRD7 247 aaPredicted RBP9.34□□□□□ -0.91
TRIM25-202ENST00000537230 I3L3M4 83 aa9.34□□□□□ -0.91
TRIM25-202ENST00000537230 XCL2Q9UBD3 114 aa9.34□□□□□ -0.91
TRIM25-202ENST00000537230 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 Q1RN00 199 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 FAM104AQ969W3 186 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 LINC01587Q99440 93 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 YAE1D1Q9NRH1 226 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 RHOHQ15669 191 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 SPXQ9BT56 116 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 VCX2Q9H322 139 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
TRIM25-202ENST00000537230 M0R2P5 195 aa9.32□□□□□ -0.92
TRIM25-202ENST00000537230 RNASE13Q5GAN3 156 aaKnown RBP9.32□□□□□ -0.92
TRIM25-202ENST00000537230 CITED1Q99966 193 aa9.32□□□□□ -0.92
TRIM25-202ENST00000537230 TMEM86BQ8N661 226 aa9.32□□□□□ -0.92
TRIM25-202ENST00000537230 CITED2Q99967 270 aaPredicted RBP9.32□□□□□ -0.92
TRIM25-202ENST00000537230 IGHV3OR16-12A0A075B7B8 117 aa9.31□□□□□ -0.92
TRIM25-202ENST00000537230 TRAV8-3A0A0A6YYJ7 113 aa9.31□□□□□ -0.92
TRIM25-202ENST00000537230 A0A0B4J2C4 111 aa9.31□□□□□ -0.92
TRIM25-202ENST00000537230 A0A0J9YXY3 114 aa9.31□□□□□ -0.92
TRIM25-202ENST00000537230 CCL24O00175 119 aa9.31□□□□□ -0.92
TRIM25-202ENST00000537230 NTN5Q8WTR8 489 aaPredicted RBP9.31□□□□□ -0.92
TRIM25-202ENST00000537230 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
TRIM25-202ENST00000537230 IGHV3-30-3P0DP02 117 aa9.3□□□□□ -0.92
TRIM25-202ENST00000537230 IGHV3-38A0A0C4DH36 116 aa9.3□□□□□ -0.92
TRIM25-202ENST00000537230 PRSS2P07478 247 aa9.3□□□□□ -0.92
TRIM25-202ENST00000537230 ZNF415Q09FC8 603 aa9.3□□□□□ -0.92
TRIM25-202ENST00000537230 A8MZ25 164 aa9.29□□□□□ -0.92
TRIM25-202ENST00000537230 ZFAND6Q6FIF0 208 aa9.29□□□□□ -0.92
TRIM25-202ENST00000537230 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 NPC2P61916 151 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 LINC01620Q4KN68 170 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 TEX49A0A1B0GTD5 131 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 TRIAP1O43715 76 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 INSP01308 110 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 ADAMTSL4-AS1Q5T5F5 129 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 C1orf158Q8N1D5 194 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 LINC01006Q8NI28 216 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 LITAFQ99732 161 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.28□□□□□ -0.92
TRIM25-202ENST00000537230 TEX29Q8N6K0 151 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 TIMM21Q9BVV7 248 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 EDA2RQ9HAV5 297 aa9.28□□□□□ -0.92
TRIM25-202ENST00000537230 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 NSD1Q96L73 2696 aaPredicted RBP9.27□□□□□ -0.93
TRIM25-202ENST00000537230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
TRIM25-202ENST00000537230 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE12JA6NER3 117 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 CCDC179H3BU77 68 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 CRLF1O75462 422 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE7O76087 117 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE12FP0CL80 117 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE12GP0CL81 117 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE12IP0CL82 117 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE4Q13068 117 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 STHQ8IWL8 128 aa9.27□□□□□ -0.93
TRIM25-202ENST00000537230 CHCHD7Q9BUK0 85 aa9.26□□□□□ -0.93
TRIM25-202ENST00000537230 TRAV4A0A0B4J268 109 aa9.26□□□□□ -0.93
TRIM25-202ENST00000537230 MRPS36P82909 103 aaKnown RBP9.25□□□□□ -0.93
TRIM25-202ENST00000537230 BEAN1Q3B7T3 259 aa9.25□□□□□ -0.93
TRIM25-202ENST00000537230 SMR3AQ99954 134 aa9.25□□□□□ -0.93
TRIM25-202ENST00000537230 LINC00467Q9BRT7 94 aa9.25□□□□□ -0.93
TRIM25-202ENST00000537230 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
TRIM25-202ENST00000537230 M0QXV9 152 aa9.25□□□□□ -0.93
TRIM25-202ENST00000537230 IGHV3-53P01767 116 aa9.25□□□□□ -0.93
TRIM25-202ENST00000537230 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
TRIM25-202ENST00000537230 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
TRIM25-202ENST00000537230 PPDPFQ9H3Y8 114 aa9.24□□□□□ -0.93
TRIM25-202ENST00000537230 TRGV1A0A0A0MS02 117 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 TRBV10-2A0A0K0K1G8 114 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 SNCGO76070 127 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 PIK3CD-AS1Q5SR53 167 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 Q6ZTI0 123 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 UBE2D4Q9Y2X8 147 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 PYGO1Q9Y3Y4 419 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 ATRQ13535 2644 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 RS1O15537 224 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 GIG44P09565 113 aaPredicted RBP9.23□□□□□ -0.93
TRIM25-202ENST00000537230 PLA2G2AP14555 144 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 DAND5Q8N907 189 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
TRIM25-202ENST00000537230 TRAV25A0A0B4J276 109 aa9.22□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE2BQ13066 116 aa9.22□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE2EQ4V326 116 aa9.22□□□□□ -0.93
TRIM25-202ENST00000537230 CLEC2BQ92478 149 aa9.22□□□□□ -0.93
TRIM25-202ENST00000537230 GAGE2DQ9UEU5 116 aa9.22□□□□□ -0.93
TRIM25-202ENST00000537230 TRRAPQ9Y4A5 3859 aa9.22□□□□□ -0.93
TRIM25-202ENST00000537230 RNASE1P07998 156 aaKnown RBP9.21□□□□□ -0.93
TRIM25-202ENST00000537230 NDUFV3P56181 108 aaKnown RBP9.21□□□□□ -0.93
TRIM25-202ENST00000537230 C2orf82Q6UX34 121 aa9.21□□□□□ -0.93
TRIM25-202ENST00000537230 VSIG2Q96IQ7 327 aa9.21□□□□□ -0.93
TRIM25-202ENST00000537230 H7C423 109 aa9.21□□□□□ -0.93
TRIM25-202ENST00000537230 IL17DQ8TAD2 202 aa9.21□□□□□ -0.93
TRIM25-202ENST00000537230 UBE2WQ96B02 151 aa9.21□□□□□ -0.93
TRIM25-202ENST00000537230 TRAV8-4A0A0B4J246 113 aa9.21□□□□□ -0.94
TRIM25-202ENST00000537230 RPL13AP40429 203 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms