RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 E7EUB6 86 aa8.04□□□□□ -1.12
CLIP1-209ENST00000537178 FRMD6-AS1P0C7T7 363 aa8.04□□□□□ -1.12
CLIP1-209ENST00000537178 Q6ZTI0 123 aa8.04□□□□□ -1.12
CLIP1-209ENST00000537178 TP73-AS1Q9UF72 201 aa8.04□□□□□ -1.12
CLIP1-209ENST00000537178 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
CLIP1-209ENST00000537178 MPLKIPQ8TAP9 179 aa8.04□□□□□ -1.12
CLIP1-209ENST00000537178 PRR15LQ9BU68 103 aa8.04□□□□□ -1.12
CLIP1-209ENST00000537178 WDR87Q6ZQQ6 2873 aa8.03□□□□□ -1.12
CLIP1-209ENST00000537178 NDUFC2-KCTD14E9PQ53 114 aa8.03□□□□□ -1.12
CLIP1-209ENST00000537178 WISP2O76076 250 aa8.03□□□□□ -1.12
CLIP1-209ENST00000537178 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
CLIP1-209ENST00000537178 WFDC11Q8NEX6 87 aa8.03□□□□□ -1.12
CLIP1-209ENST00000537178 CDKN2A-AS1Q9UH64 79 aa8.03□□□□□ -1.12
CLIP1-209ENST00000537178 TNFRSF13BO14836 293 aaPredicted RBP8.03□□□□□ -1.12
CLIP1-209ENST00000537178 NRGNQ92686 78 aa8.03□□□□□ -1.12
CLIP1-209ENST00000537178 FBXL19-AS1Q494R0 122 aa8.03□□□□□ -1.12
CLIP1-209ENST00000537178 PCSK5Q92824 1860 aa8.02□□□□□ -1.12
CLIP1-209ENST00000537178 LOXL1Q08397 574 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-209ENST00000537178 FAM222AQ5U5X8 452 aa8.02□□□□□ -1.13
CLIP1-209ENST00000537178 ARHGAP21Q5T5U3 1957 aa8.02□□□□□ -1.13
CLIP1-209ENST00000537178 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
CLIP1-209ENST00000537178 SMG1Q96Q15 3661 aaKnown RBP8.01□□□□□ -1.13
CLIP1-209ENST00000537178 CRYGDP07320 174 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 ZNF80P51504 273 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-209ENST00000537178 NAV3Q8IVL0 2385 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-209ENST00000537178 PLA2G5P39877 138 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 ENHOQ6UWT2 76 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 P0DMU3 169 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 FAM231AP0DMU4 169 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 FAM231CP0DMU5 169 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 LINC00308Q8TCZ7 52 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 SPRY4Q9C004 299 aa8.01□□□□□ -1.13
CLIP1-209ENST00000537178 WDFY4Q6ZS81 3184 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 IGKV1D-37A0A075B6S9 117 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 SCXQ7RTU7 201 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 CCDC140Q96MF4 163 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 HIVEP3Q5T1R4 2406 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 LRCOL1A6NCL2 159 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 DNAJC9-AS1A6NH13 148 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 K7EQG2 157 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 NDUFC1O43677 76 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 MT-ATP8P03928 68 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 ZNF22P17026 224 aaPredicted RBP8□□□□□ -1.13
CLIP1-209ENST00000537178 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
CLIP1-209ENST00000537178 NEXN-AS1Q8NBZ9 246 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 LINC00467Q9BRT7 94 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 CCKP06307 115 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 IGLV2-14P01704 120 aa8□□□□□ -1.13
CLIP1-209ENST00000537178 DEFB131BA0A096LNP1 70 aa7.99□□□□□ -1.13
CLIP1-209ENST00000537178 HILS1P60008 231 aa7.99□□□□□ -1.13
CLIP1-209ENST00000537178 ABCA2Q9BZC7 2435 aa7.99□□□□□ -1.13
CLIP1-209ENST00000537178 PLXNB1O43157 2135 aa7.99□□□□□ -1.13
CLIP1-209ENST00000537178 IGLV4-3A0A075B6K6 122 aa7.99□□□□□ -1.13
CLIP1-209ENST00000537178 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
CLIP1-209ENST00000537178 WFDC10BQ8IUB3 73 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 NAV2Q8IVL1 2488 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 TRBV30A0A0K0K1B3 111 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 TMEM223A0PJW6 202 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 FAM19A3Q7Z5A8 133 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 C6orf99Q4VX62 202 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 C1orf158Q8N1D5 194 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 TP53TG3Q9ULZ0 132 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 IGF1P05019 195 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 Q8N9L7 120 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 XAGE1AQ9HD64 81 aa7.98□□□□□ -1.13
CLIP1-209ENST00000537178 ASPMQ8IZT6 3477 aa7.97□□□□□ -1.13
CLIP1-209ENST00000537178 SLPIP03973 132 aa7.97□□□□□ -1.13
CLIP1-209ENST00000537178 MLST8Q9BVC4 326 aa7.97□□□□□ -1.13
CLIP1-209ENST00000537178 IGLV2-8P01709 118 aa7.97□□□□□ -1.13
CLIP1-209ENST00000537178 C7orf33Q8WU49 177 aa7.97□□□□□ -1.13
CLIP1-209ENST00000537178 P0C879 139 aa7.97□□□□□ -1.13
CLIP1-209ENST00000537178 DEFB114Q30KQ6 69 aa7.97□□□□□ -1.13
CLIP1-209ENST00000537178 LINC00322Q6ZN03 302 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-209ENST00000537178 SERP1Q9Y6X1 66 aa7.97□□□□□ -1.13
CLIP1-209ENST00000537178 TRBV6-8A0A0A6YYG3 113 aa7.96□□□□□ -1.13
CLIP1-209ENST00000537178 LMO4P61968 165 aa7.96□□□□□ -1.13
CLIP1-209ENST00000537178 LOC400499M0QZD8 3231 aa7.96□□□□□ -1.13
CLIP1-209ENST00000537178 MYO9AB2RTY4 2548 aa7.96□□□□□ -1.13
CLIP1-209ENST00000537178 TRBV6-4A0A1B0GX49 114 aa7.96□□□□□ -1.13
CLIP1-209ENST00000537178 CFAP47Q6ZTR5 3102 aa7.96□□□□□ -1.14
CLIP1-209ENST00000537178 ODF3BA8MYP8 253 aa7.96□□□□□ -1.14
CLIP1-209ENST00000537178 TRIAP1O43715 76 aa7.96□□□□□ -1.14
CLIP1-209ENST00000537178 PIK3CD-AS1Q5SR53 167 aa7.96□□□□□ -1.14
CLIP1-209ENST00000537178 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-209ENST00000537178 LINC00574Q9H8X3 128 aa7.96□□□□□ -1.14
CLIP1-209ENST00000537178 A0A0U1RQV1 116 aa7.96□□□□□ -1.14
CLIP1-209ENST00000537178 MIFP14174 115 aa7.96□□□□□ -1.14
CLIP1-209ENST00000537178 FAM19A5Q7Z5A7 132 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-209ENST00000537178 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
CLIP1-209ENST00000537178 PRRC2AP48634 2157 aaKnown RBP7.95□□□□□ -1.14
CLIP1-209ENST00000537178 MSMPQ1L6U9 139 aa7.95□□□□□ -1.14
CLIP1-209ENST00000537178 IMUPQ9GZP8 106 aa7.95□□□□□ -1.14
CLIP1-209ENST00000537178 LRRC75A-AS1Q8N1F1 130 aa7.95□□□□□ -1.14
CLIP1-209ENST00000537178 GDF5OSQ5U4N7 250 aa7.94□□□□□ -1.14
CLIP1-209ENST00000537178 ZNF706Q9Y5V0 76 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-209ENST00000537178 A6NED7 52 aa7.94□□□□□ -1.14
CLIP1-209ENST00000537178 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
CLIP1-209ENST00000537178 M0QY20 66 aa7.94□□□□□ -1.14
CLIP1-209ENST00000537178 TIMM17BO60830 172 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms