RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SOSTDC1Q6X4U4 206 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 C9orf85Q96MD7 179 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 SIRPDQ9H106 197 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 MUC6Q6W4X9 2439 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 SEM1Q6ZVN7 128 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 GPHB5Q86YW7 130 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 MP68P56378 58 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 C2orf48Q96LS8 159 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 KIF25-AS1Q9Y6Z4 181 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 SLURP1P55000 103 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 C5orf56Q8N8D9 126 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 MAPK1IP1LQ8NDC0 245 aa3.98□□□□□ -1.77
PTPRD-213ENST00000537002 PRRC2AP48634 2157 aaKnown RBP3.97□□□□□ -1.77
PTPRD-213ENST00000537002 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
PTPRD-213ENST00000537002 RIF1Q5UIP0 2472 aaKnown RBP3.97□□□□□ -1.77
PTPRD-213ENST00000537002 TRAV7A0A075B6U4 112 aa3.97□□□□□ -1.77
PTPRD-213ENST00000537002 ZFP36P26651 326 aaKnown RBP3.97□□□□□ -1.77
PTPRD-213ENST00000537002 RNASE3P12724 160 aaKnown RBP3.97□□□□□ -1.77
PTPRD-213ENST00000537002 ADAMTSL4-AS1Q5T5F5 129 aa3.97□□□□□ -1.77
PTPRD-213ENST00000537002 KLLNB2CW77 178 aa3.97□□□□□ -1.77
PTPRD-213ENST00000537002 MSMBP08118 114 aa3.97□□□□□ -1.77
PTPRD-213ENST00000537002 PKDREJQ9NTG1 2253 aa3.97□□□□□ -1.77
PTPRD-213ENST00000537002 LITAFQ99732 161 aa3.97□□□□□ -1.77
PTPRD-213ENST00000537002 DEFB113Q30KQ7 82 aa3.97□□□□□ -1.77
PTPRD-213ENST00000537002 ANKHD1Q8IWZ3 2542 aaKnown RBP3.96□□□□□ -1.77
PTPRD-213ENST00000537002 A0A1W2PNU3 283 aaPredicted RBP3.96□□□□□ -1.78
PTPRD-213ENST00000537002 PRR4Q16378 134 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 IGHV4-38-2P0DP08 117 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 Q8N6K4 173 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 EP300Q09472 2414 aaPredicted RBP3.96□□□□□ -1.78
PTPRD-213ENST00000537002 TECTAO75443 2155 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 ODF3BA8MYP8 253 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 NDUFS5O43920 106 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 IGHV4-59P01825 116 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 SPTBN1Q01082 2364 aaKnown RBP3.96□□□□□ -1.78
PTPRD-213ENST00000537002 PIEZO1Q92508 2521 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 A0A087WYN8 130 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 LRCOL1A6NCL2 159 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 DIRC1Q969H9 104 aa3.96□□□□□ -1.78
PTPRD-213ENST00000537002 CLPSL1A2RUU4 121 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 K7EMT4 169 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 GYPEP15421 78 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 LINC01356Q8N9X3 169 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 MUC7Q8TAX7 377 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 FAM19A4Q96LR4 140 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 Q96MF0 132 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 UBE2D4Q9Y2X8 147 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 LINC00315P59091 139 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 C22orf34Q6ZV56 151 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 F8W735 103 aaPredicted RBP3.95□□□□□ -1.78
PTPRD-213ENST00000537002 BPY2O14599 106 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 ERC2-IT1O76042 136 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 EP400Q96L91 3159 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 LYRM9A8MSI8 78 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 RETNQ9HD89 108 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 ESM1Q9NQ30 184 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 COX7BP24311 80 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 RMI2Q96E14 147 aa3.95□□□□□ -1.78
PTPRD-213ENST00000537002 HIGD2BQ4VC39 106 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 FAM19A3Q7Z5A8 133 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 J3QLI3 93 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 MIFP14174 115 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 HILS1P60008 231 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 SEC61GP60059 68 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 DEFB112Q30KQ8 113 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 ZNF575Q86XF7 245 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 IGLV5-39A0A0G2JS06 123 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 OBSCN-AS1Q96MR7 158 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 CAMK2N2Q96S95 79 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 CCKP06307 115 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 C16orf74Q96GX8 76 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 ZFHX2Q9C0A1 2572 aaPredicted RBP3.94□□□□□ -1.78
PTPRD-213ENST00000537002 CUL9Q8IWT3 2517 aa3.94□□□□□ -1.78
PTPRD-213ENST00000537002 UBE2BP63146 152 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 C6orf99Q4VX62 202 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 Q6ZTI0 123 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 RNF223E7ERA6 249 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 EPM2AB3EWF7 344 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 ADORA2A-AS1P86434 159 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 ETDCA0A1B0GVM5 59 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 SPAG11BQ08648 103 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 FBXL19-AS1Q494R0 122 aa3.93□□□□□ -1.78
PTPRD-213ENST00000537002 IBA57-AS1B1ANH7 110 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 Q8NA96 180 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 IL17DQ8TAD2 202 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 FAM19A1Q7Z5A9 133 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 TRBV10-1A0A0K0K1A3 114 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 TMEM89A2RUT3 159 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 C3orf84H3BNL1 204 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 PRM2P04554 102 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 FAM30AQ9NZY2 134 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 CHKB-CPT1BH3BT56 60 aa3.92□□□□□ -1.78
PTPRD-213ENST00000537002 EIF4EBP3O60516 100 aaPredicted RBP3.91□□□□□ -1.78
PTPRD-213ENST00000537002 POLEQ07864 2286 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 IGKV2D-24A0A075B6R9 120 aa3.91□□□□□ -1.78
PTPRD-213ENST00000537002 IGHV4-61A0A0C4DH41 118 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms