RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 KRTAP10-8P60410 259 aa8.05□□□□□ -1.12
TNFRSF1A-207ENST00000535958 RNASE7Q9H1E1 156 aaKnown RBP8.05□□□□□ -1.12
TNFRSF1A-207ENST00000535958 GAS8-AS1O95177 125 aa8.04□□□□□ -1.12
TNFRSF1A-207ENST00000535958 MT-ND6P03923 174 aa8.04□□□□□ -1.12
TNFRSF1A-207ENST00000535958 TAGLN2P37802 199 aaKnown RBP8.04□□□□□ -1.12
TNFRSF1A-207ENST00000535958 PTTG1IPP53801 180 aa8.04□□□□□ -1.12
TNFRSF1A-207ENST00000535958 CD164L2Q6UWJ8 174 aa8.04□□□□□ -1.12
TNFRSF1A-207ENST00000535958 ST20Q9HBF5 79 aa8.04□□□□□ -1.12
TNFRSF1A-207ENST00000535958 TMEM242Q9NWH2 141 aa8.04□□□□□ -1.12
TNFRSF1A-207ENST00000535958 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
TNFRSF1A-207ENST00000535958 FAM210AQ96ND0 272 aa8.03□□□□□ -1.12
TNFRSF1A-207ENST00000535958 CAMK2N2Q96S95 79 aa8.03□□□□□ -1.12
TNFRSF1A-207ENST00000535958 C7orf77A4D0Y5 90 aa8.02□□□□□ -1.13
TNFRSF1A-207ENST00000535958 GATCO43716 136 aaKnown RBP8.02□□□□□ -1.13
TNFRSF1A-207ENST00000535958 RPL18AQ02543 176 aaKnown RBP8.02□□□□□ -1.13
TNFRSF1A-207ENST00000535958 SRSF9Q13242 221 aaKnown RBP eCLIP8.02□□□□□ -1.13
TNFRSF1A-207ENST00000535958 IGLV4-69A0A075B6H9 119 aa8.01□□□□□ -1.13
TNFRSF1A-207ENST00000535958 TRBV6-5A0A0K0K1A5 114 aa8.01□□□□□ -1.13
TNFRSF1A-207ENST00000535958 COX7A2LO14548 114 aa8.01□□□□□ -1.13
TNFRSF1A-207ENST00000535958 FCER1GP30273 86 aa8.01□□□□□ -1.13
TNFRSF1A-207ENST00000535958 FOXA3P55318 350 aaPredicted RBP8.01□□□□□ -1.13
TNFRSF1A-207ENST00000535958 ZNF664Q8N3J9 261 aa8.01□□□□□ -1.13
TNFRSF1A-207ENST00000535958 A8MWL6 223 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 C1orf196B1AJZ1 125 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 K7EN84 100 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 APOMO95445 188 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 TSHBP01222 138 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 ESDP10768 282 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 C1orf137Q5JT78 98 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 MRPL52Q86TS9 123 aaKnown RBP8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 OCC1Q8TAD7 63 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 CDC42SE2Q9NRR3 84 aa8□□□□□ -1.13
TNFRSF1A-207ENST00000535958 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
TNFRSF1A-207ENST00000535958 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
TNFRSF1A-207ENST00000535958 TSKUQ8WUA8 353 aa7.98□□□□□ -1.13
TNFRSF1A-207ENST00000535958 A0A1W2PNN7 141 aa7.97□□□□□ -1.13
TNFRSF1A-207ENST00000535958 CEBPGP53567 150 aa7.97□□□□□ -1.13
TNFRSF1A-207ENST00000535958 FAM231DQ6ZW35 169 aa7.97□□□□□ -1.13
TNFRSF1A-207ENST00000535958 NUP35Q8NFH5 326 aa7.97□□□□□ -1.13
TNFRSF1A-207ENST00000535958 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
TNFRSF1A-207ENST00000535958 TRAV13-1A0A0B4J241 112 aa7.96□□□□□ -1.14
TNFRSF1A-207ENST00000535958 A0A1B0GUT8 65 aa7.96□□□□□ -1.14
TNFRSF1A-207ENST00000535958 SPAG11BQ08648 103 aa7.96□□□□□ -1.14
TNFRSF1A-207ENST00000535958 CT83Q5H943 113 aa7.96□□□□□ -1.14
TNFRSF1A-207ENST00000535958 DIRC1Q969H9 104 aa7.96□□□□□ -1.14
TNFRSF1A-207ENST00000535958 TMEM18Q96B42 140 aa7.96□□□□□ -1.14
TNFRSF1A-207ENST00000535958 KIR2DL4Q99706 377 aa7.96□□□□□ -1.14
TNFRSF1A-207ENST00000535958 TMEM191AQ9H0A3 160 aa7.96□□□□□ -1.14
TNFRSF1A-207ENST00000535958 TRBV27A0A0K0K1C4 114 aa7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 TMEM250H0YL14 139 aa7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 VCYO14598 125 aa7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 PPP1R17O96001 155 aa7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 RNASE13Q5GAN3 156 aaKnown RBP7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 PHF5AQ7RTV0 110 aaKnown RBP7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 C5orf38Q86SI9 138 aa7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 SLC51BQ86UW2 128 aa7.95□□□□□ -1.14
TNFRSF1A-207ENST00000535958 HIGD1CA8MV81 97 aa7.94□□□□□ -1.14
TNFRSF1A-207ENST00000535958 POLR2KP53803 58 aaKnown RBP7.94□□□□□ -1.14
TNFRSF1A-207ENST00000535958 A0A087WZ39 114 aa7.93□□□□□ -1.14
TNFRSF1A-207ENST00000535958 AMN1Q8IY45 258 aa7.93□□□□□ -1.14
TNFRSF1A-207ENST00000535958 OR10D4PQ8NGN7 298 aa7.93□□□□□ -1.14
TNFRSF1A-207ENST00000535958 IMMP2LQ96T52 175 aa7.93□□□□□ -1.14
TNFRSF1A-207ENST00000535958 OPRPNQ99935 248 aaPredicted RBP7.93□□□□□ -1.14
TNFRSF1A-207ENST00000535958 UBE2D4Q9Y2X8 147 aa7.93□□□□□ -1.14
TNFRSF1A-207ENST00000535958 CSDC2Q9Y534 153 aaKnown RBP7.93□□□□□ -1.14
TNFRSF1A-207ENST00000535958 PPP1R2P9O14990 202 aa7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 RAB4AP20338 218 aa7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 UBE2D1P51668 147 aa7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 SUMO2P61956 95 aaKnown RBP7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 RNF151Q2KHN1 245 aa7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 Q6ZUT4 128 aa7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 ORAOV1Q8WV07 137 aa7.92□□□□□ -1.14
TNFRSF1A-207ENST00000535958 LPAP08519 4548 aa7.91□□□□□ -1.14
TNFRSF1A-207ENST00000535958 SMKR1H3BMG3 65 aa7.91□□□□□ -1.14
TNFRSF1A-207ENST00000535958 NDUFA1O15239 70 aa7.91□□□□□ -1.14
TNFRSF1A-207ENST00000535958 RIGQ13278 110 aa7.91□□□□□ -1.14
TNFRSF1A-207ENST00000535958 SMIM7Q9BQ49 75 aa7.91□□□□□ -1.14
TNFRSF1A-207ENST00000535958 F8WDY8 70 aa7.9□□□□□ -1.14
TNFRSF1A-207ENST00000535958 H0Y9J4 135 aa7.9□□□□□ -1.14
TNFRSF1A-207ENST00000535958 UBE2BP63146 152 aa7.9□□□□□ -1.14
TNFRSF1A-207ENST00000535958 BLOC1S1P78537 153 aa7.9□□□□□ -1.14
TNFRSF1A-207ENST00000535958 FAM19A5Q7Z5A7 132 aaPredicted RBP7.9□□□□□ -1.14
TNFRSF1A-207ENST00000535958 MRPL35Q9NZE8 188 aaKnown RBP7.9□□□□□ -1.14
TNFRSF1A-207ENST00000535958 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
TNFRSF1A-207ENST00000535958 TCAPO15273 167 aa7.89□□□□□ -1.15
TNFRSF1A-207ENST00000535958 EIF5A2Q9GZV4 153 aaKnown RBP7.89□□□□□ -1.15
TNFRSF1A-207ENST00000535958 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
TNFRSF1A-207ENST00000535958 TIMM21Q9BVV7 248 aa7.88□□□□□ -1.15
TNFRSF1A-207ENST00000535958 OSTCQ9NRP0 149 aa7.88□□□□□ -1.15
TNFRSF1A-207ENST00000535958 IFITM10A6NMD0 228 aa7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 ZNF727A8MUV8 499 aa7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 RPL13AP40429 203 aaKnown RBP7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 PRR4Q16378 134 aa7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 TMEM241Q24JQ0 296 aa7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 GAGE2EQ4V326 116 aa7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 LINC01551Q86U37 167 aa7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 TCTE3Q8IZS6 198 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms