RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CSDC2Q9Y534 153 aaKnown RBP13.91□□□□□ -0.18
PKP3-211ENST00000534401 NPYP01303 97 aa13.9□□□□□ -0.18
PKP3-211ENST00000534401 PRSS1P07477 247 aa13.9□□□□□ -0.18
PKP3-211ENST00000534401 OR5A1Q8NGJ0 315 aa13.9□□□□□ -0.18
PKP3-211ENST00000534401 SMIM2Q9BVW6 85 aa13.9□□□□□ -0.18
PKP3-211ENST00000534401 CDC42SE2Q9NRR3 84 aa13.9□□□□□ -0.18
PKP3-211ENST00000534401 TCAPO15273 167 aa13.89□□□□□ -0.19
PKP3-211ENST00000534401 CLRN3Q8NCR9 226 aa13.89□□□□□ -0.19
PKP3-211ENST00000534401 FCER1GP30273 86 aa13.88□□□□□ -0.19
PKP3-211ENST00000534401 DGAT2L7PQ6IED9 249 aa13.88□□□□□ -0.19
PKP3-211ENST00000534401 TMEM136Q6ZRR5 245 aa13.88□□□□□ -0.19
PKP3-211ENST00000534401 ORMDL3Q8N138 153 aa13.88□□□□□ -0.19
PKP3-211ENST00000534401 TIMM21Q9BVV7 248 aa13.88□□□□□ -0.19
PKP3-211ENST00000534401 CARHSP1Q9Y2V2 147 aaKnown RBP13.88□□□□□ -0.19
PKP3-211ENST00000534401 TRAV9-1A0A075B6T8 112 aa13.87□□□□□ -0.19
PKP3-211ENST00000534401 TMEM101Q96IK0 257 aa13.87□□□□□ -0.19
PKP3-211ENST00000534401 LAMTOR2Q9Y2Q5 125 aa13.87□□□□□ -0.19
PKP3-211ENST00000534401 UBE2D4Q9Y2X8 147 aa13.87□□□□□ -0.19
PKP3-211ENST00000534401 CHCHD10Q8WYQ3 142 aaPredicted RBP13.86□□□□□ -0.19
PKP3-211ENST00000534401 PRELID3AQ96N28 172 aa13.86□□□□□ -0.19
PKP3-211ENST00000534401 ZNF664Q8N3J9 261 aa13.85□□□□□ -0.19
PKP3-211ENST00000534401 LINC00959A0A1B0GUT2 108 aa13.84□□□□□ -0.19
PKP3-211ENST00000534401 GAGE12HA6NDE8 117 aa13.84□□□□□ -0.19
PKP3-211ENST00000534401 SMAGPQ0VAQ4 97 aa13.84□□□□□ -0.19
PKP3-211ENST00000534401 FAM104AQ969W3 186 aa13.84□□□□□ -0.19
PKP3-211ENST00000534401 CNBPP62633 177 aaKnown RBP13.83□□□□□ -0.2
PKP3-211ENST00000534401 LINC01620Q4KN68 170 aa13.83□□□□□ -0.2
PKP3-211ENST00000534401 C9orf163Q8N9P6 203 aa13.83□□□□□ -0.2
PKP3-211ENST00000534401 FOXI1Q12951 378 aa13.82□□□□□ -0.2
PKP3-211ENST00000534401 C15orf56Q8N910 161 aa13.82□□□□□ -0.2
PKP3-211ENST00000534401 TMEM18Q96B42 140 aa13.82□□□□□ -0.2
PKP3-211ENST00000534401 IGKV3OR2-268A0A0C4DH90 116 aa13.81□□□□□ -0.2
PKP3-211ENST00000534401 CCL25O15444 150 aa13.81□□□□□ -0.2
PKP3-211ENST00000534401 FAT1Q14517 4588 aa13.81□□□□□ -0.2
PKP3-211ENST00000534401 SLPIP03973 132 aa13.8□□□□□ -0.2
PKP3-211ENST00000534401 RPL39P62891 51 aaKnown RBP13.79□□□□□ -0.2
PKP3-211ENST00000534401 CFAP161Q6P656 301 aa13.79□□□□□ -0.2
PKP3-211ENST00000534401 VPS13BQ7Z7G8 4022 aa13.78□□□□□ -0.2
PKP3-211ENST00000534401 RHEBQ15382 184 aa13.78□□□□□ -0.2
PKP3-211ENST00000534401 MRPS36P82909 103 aaKnown RBP13.77□□□□□ -0.21
PKP3-211ENST00000534401 SS18Q15532 418 aa13.77□□□□□ -0.21
PKP3-211ENST00000534401 CD164L2Q6UWJ8 174 aa13.77□□□□□ -0.21
PKP3-211ENST00000534401 SDIM1Q6ZPB5 146 aa13.77□□□□□ -0.21
PKP3-211ENST00000534401 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
PKP3-211ENST00000534401 GVQW2A0A096LPI5 108 aaPredicted RBP13.76□□□□□ -0.21
PKP3-211ENST00000534401 hDV102S1A0JD36 115 aa13.76□□□□□ -0.21
PKP3-211ENST00000534401 HAMPP81172 84 aa13.76□□□□□ -0.21
PKP3-211ENST00000534401 Q6ZUT4 128 aa13.76□□□□□ -0.21
PKP3-211ENST00000534401 Q8N8P6 123 aa13.76□□□□□ -0.21
PKP3-211ENST00000534401 CHAC1Q9BUX1 264 aa13.76□□□□□ -0.21
PKP3-211ENST00000534401 MAP1LC3AQ9H492 121 aa13.76□□□□□ -0.21
PKP3-211ENST00000534401 C1orf196B1AJZ1 125 aa13.75□□□□□ -0.21
PKP3-211ENST00000534401 XCL1P47992 114 aa13.75□□□□□ -0.21
PKP3-211ENST00000534401 GNB1LQ9BYB4 327 aa13.75□□□□□ -0.21
PKP3-211ENST00000534401 PYGO1Q9Y3Y4 419 aa13.75□□□□□ -0.21
PKP3-211ENST00000534401 EPM2AB3EWF7 344 aa13.74□□□□□ -0.21
PKP3-211ENST00000534401 K7EMI3 77 aa13.74□□□□□ -0.21
PKP3-211ENST00000534401 RAB5AP20339 215 aa13.74□□□□□ -0.21
PKP3-211ENST00000534401 S100PP25815 95 aa13.74□□□□□ -0.21
PKP3-211ENST00000534401 SMR3BP02814 79 aaPredicted RBP13.73□□□□□ -0.21
PKP3-211ENST00000534401 COX19Q49B96 90 aa13.73□□□□□ -0.21
PKP3-211ENST00000534401 SCXQ7RTU7 201 aa13.73□□□□□ -0.21
PKP3-211ENST00000534401 AP5S1Q9NUS5 200 aa13.73□□□□□ -0.21
PKP3-211ENST00000534401 RNASE13Q5GAN3 156 aaKnown RBP13.72□□□□□ -0.21
PKP3-211ENST00000534401 SRRM2Q9UQ35 2752 aaKnown RBP13.72□□□□□ -0.21
PKP3-211ENST00000534401 IGHV1-58A0A0C4DH39 117 aa13.71□□□□□ -0.21
PKP3-211ENST00000534401 LOC389332A0A1B0GUA5 103 aa13.71□□□□□ -0.21
PKP3-211ENST00000534401 CIRBPQ14011 172 aaKnown RBP13.71□□□□□ -0.21
PKP3-211ENST00000534401 Q5VSD8 79 aa13.71□□□□□ -0.21
PKP3-211ENST00000534401 NXT2Q9NPJ8 142 aaKnown RBP13.71□□□□□ -0.21
PKP3-211ENST00000534401 RPS10P5Q9NQ39 176 aa13.71□□□□□ -0.21
PKP3-211ENST00000534401 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.7□□□□□ -0.22
PKP3-211ENST00000534401 CIRBP-AS1Q8TBR5 109 aa13.7□□□□□ -0.22
PKP3-211ENST00000534401 OPRPNQ99935 248 aaPredicted RBP13.7□□□□□ -0.22
PKP3-211ENST00000534401 KIAA1644Q3SXP7 199 aa13.69□□□□□ -0.22
PKP3-211ENST00000534401 TRAV13-1A0A0B4J241 112 aa13.68□□□□□ -0.22
PKP3-211ENST00000534401 HIGD2BQ4VC39 106 aa13.68□□□□□ -0.22
PKP3-211ENST00000534401 ORMDL2Q53FV1 153 aa13.68□□□□□ -0.22
PKP3-211ENST00000534401 IGLV4-3A0A075B6K6 122 aa13.67□□□□□ -0.22
PKP3-211ENST00000534401 IGHV3-64A0A075B6Q5 118 aa13.67□□□□□ -0.22
PKP3-211ENST00000534401 FAM229AH3BQW9 127 aa13.67□□□□□ -0.22
PKP3-211ENST00000534401 MT-ND6P03923 174 aa13.67□□□□□ -0.22
PKP3-211ENST00000534401 ALKBH7Q9BT30 221 aaPredicted RBP13.67□□□□□ -0.22
PKP3-211ENST00000534401 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.67□□□□□ -0.22
PKP3-211ENST00000534401 LINC01546A6NGU7 62 aa13.66□□□□□ -0.22
PKP3-211ENST00000534401 PANO1I0J062 215 aa13.66□□□□□ -0.22
PKP3-211ENST00000534401 APOC3P02656 99 aa13.66□□□□□ -0.22
PKP3-211ENST00000534401 NPSP0C0P6 89 aa13.66□□□□□ -0.22
PKP3-211ENST00000534401 IFI27P40305 119 aaPredicted RBP13.66□□□□□ -0.22
PKP3-211ENST00000534401 IGHV3OR16-9A0A0B4J2B5 98 aa13.65□□□□□ -0.22
PKP3-211ENST00000534401 COX7A2LO14548 114 aa13.65□□□□□ -0.22
PKP3-211ENST00000534401 SNAPINO95295 136 aa13.65□□□□□ -0.22
PKP3-211ENST00000534401 C2orf66Q6UXQ4 117 aa13.65□□□□□ -0.22
PKP3-211ENST00000534401 SVBPQ8N300 66 aa13.65□□□□□ -0.22
PKP3-211ENST00000534401 CYSLTR1Q9Y271 337 aa13.65□□□□□ -0.22
PKP3-211ENST00000534401 IGIPA6NJ69 53 aa13.64□□□□□ -0.23
PKP3-211ENST00000534401 NDUFA5Q16718 116 aa13.63□□□□□ -0.23
PKP3-211ENST00000534401 TMEM141Q96I45 108 aa13.63□□□□□ -0.23
PKP3-211ENST00000534401 AMELXQ99217 191 aa13.63□□□□□ -0.23
PKP3-211ENST00000534401 LINC00528Q8N1L1 170 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms