RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 LINC00959A0A1B0GUT2 108 aa5.65□□□□□ -1.5
COPB1-211ENST00000534234 TSHBP01222 138 aa5.65□□□□□ -1.5
COPB1-211ENST00000534234 XCL1P47992 114 aa5.65□□□□□ -1.5
COPB1-211ENST00000534234 FOXI1Q12951 378 aa5.65□□□□□ -1.5
COPB1-211ENST00000534234 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.5
COPB1-211ENST00000534234 MRAP2Q96G30 205 aa5.65□□□□□ -1.5
COPB1-211ENST00000534234 TMEM242Q9NWH2 141 aa5.65□□□□□ -1.5
COPB1-211ENST00000534234 LRP1Q07954 4544 aaKnown RBP5.64□□□□□ -1.51
COPB1-211ENST00000534234 GVQW2A0A096LPI5 108 aaPredicted RBP5.64□□□□□ -1.51
COPB1-211ENST00000534234 TRBV27A0A0K0K1C4 114 aa5.64□□□□□ -1.51
COPB1-211ENST00000534234 CCL25O15444 150 aa5.64□□□□□ -1.51
COPB1-211ENST00000534234 AMN1Q8IY45 258 aa5.64□□□□□ -1.51
COPB1-211ENST00000534234 PLAC8Q9NZF1 115 aa5.64□□□□□ -1.51
COPB1-211ENST00000534234 IGKV2-24A0A0C4DH68 120 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 VCYO14598 125 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 GHRHP01286 108 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 RIGQ13278 110 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 SS18Q15532 418 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 TMEM241Q24JQ0 296 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 MAJINQ3KP22 176 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 MRPL52Q86TS9 123 aaKnown RBP5.63□□□□□ -1.51
COPB1-211ENST00000534234 ZNF664Q8N3J9 261 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 NUP35Q8NFH5 326 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 V9GYV3 84 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 C7orf77A4D0Y5 90 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 SMKR1H3BMG3 65 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 Q6ZRU5 148 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 ISOC2Q96AB3 205 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 LINC00526Q96FQ7 95 aa5.63□□□□□ -1.51
COPB1-211ENST00000534234 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
COPB1-211ENST00000534234 PHOX2AO14813 284 aa5.62□□□□□ -1.51
COPB1-211ENST00000534234 PPP1R17O96001 155 aa5.62□□□□□ -1.51
COPB1-211ENST00000534234 FCER1GP30273 86 aa5.62□□□□□ -1.51
COPB1-211ENST00000534234 RPL23P62829 140 aaKnown RBP5.62□□□□□ -1.51
COPB1-211ENST00000534234 FAM74A3Q4VXF1 159 aa5.62□□□□□ -1.51
COPB1-211ENST00000534234 CD164L2Q6UWJ8 174 aa5.62□□□□□ -1.51
COPB1-211ENST00000534234 STPG4Q8N801 248 aa5.62□□□□□ -1.51
COPB1-211ENST00000534234 NAT8BQ9UHF3 227 aa5.62□□□□□ -1.51
COPB1-211ENST00000534234 A0A096LNI7 61 aa5.61□□□□□ -1.51
COPB1-211ENST00000534234 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
COPB1-211ENST00000534234 SUMO2P61956 95 aaKnown RBP5.61□□□□□ -1.51
COPB1-211ENST00000534234 ADIRFQ15847 76 aa5.61□□□□□ -1.51
COPB1-211ENST00000534234 NRACQ8N912 160 aa5.61□□□□□ -1.51
COPB1-211ENST00000534234 PLA2G2DQ9UNK4 145 aa5.61□□□□□ -1.51
COPB1-211ENST00000534234 A0A1B0GVG6 124 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 C1orf196B1AJZ1 125 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 C9JQL5 133 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 CAMPP49913 170 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 SMAGPQ0VAQ4 97 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 MRPL51Q4U2R6 128 aaKnown RBP5.6□□□□□ -1.51
COPB1-211ENST00000534234 FAM104BQ5XKR9 115 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 KIR2DL4Q99706 377 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 LINC00474Q9P2X8 69 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 NAT8Q9UHE5 227 aa5.6□□□□□ -1.51
COPB1-211ENST00000534234 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
COPB1-211ENST00000534234 SMIM27A0A1W2PRY6 76 aa5.59□□□□□ -1.51
COPB1-211ENST00000534234 PPP1R2P9O14990 202 aa5.59□□□□□ -1.51
COPB1-211ENST00000534234 SRSF3P84103 164 aaKnown RBP5.59□□□□□ -1.51
COPB1-211ENST00000534234 SYCNQ0VAF6 134 aa5.59□□□□□ -1.51
COPB1-211ENST00000534234 CARD19Q96LW7 228 aa5.59□□□□□ -1.51
COPB1-211ENST00000534234 PKIGQ9Y2B9 76 aa5.59□□□□□ -1.51
COPB1-211ENST00000534234 UBE2D4Q9Y2X8 147 aa5.59□□□□□ -1.51
COPB1-211ENST00000534234 TRAV13-1A0A0B4J241 112 aa5.59□□□□□ -1.52
COPB1-211ENST00000534234 LINC00862A6NCI5 91 aa5.59□□□□□ -1.52
COPB1-211ENST00000534234 MALP21145 153 aa5.59□□□□□ -1.52
COPB1-211ENST00000534234 CKS2P33552 79 aa5.59□□□□□ -1.52
COPB1-211ENST00000534234 PEA15Q15121 130 aa5.59□□□□□ -1.52
COPB1-211ENST00000534234 RNASE13Q5GAN3 156 aaKnown RBP5.59□□□□□ -1.52
COPB1-211ENST00000534234 IGLV4-69A0A075B6H9 119 aa5.58□□□□□ -1.52
COPB1-211ENST00000534234 TRBV24-1A0A075B6N3 115 aa5.58□□□□□ -1.52
COPB1-211ENST00000534234 A0A1B0GW15 77 aa5.58□□□□□ -1.52
COPB1-211ENST00000534234 COX7A2LO14548 114 aa5.58□□□□□ -1.52
COPB1-211ENST00000534234 TMEM18Q96B42 140 aa5.58□□□□□ -1.52
COPB1-211ENST00000534234 C20orf78Q9BR46 151 aa5.58□□□□□ -1.52
COPB1-211ENST00000534234 SMDT1Q9H4I9 107 aa5.58□□□□□ -1.52
COPB1-211ENST00000534234 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
COPB1-211ENST00000534234 TNFRSF6BO95407 300 aa5.57□□□□□ -1.52
COPB1-211ENST00000534234 PRR3P79522 188 aaKnown RBP5.57□□□□□ -1.52
COPB1-211ENST00000534234 C5orf38Q86SI9 138 aa5.57□□□□□ -1.52
COPB1-211ENST00000534234 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
COPB1-211ENST00000534234 TCAPO15273 167 aa5.56□□□□□ -1.52
COPB1-211ENST00000534234 RPL32P62910 135 aaKnown RBP5.56□□□□□ -1.52
COPB1-211ENST00000534234 GAGE2BQ13066 116 aa5.56□□□□□ -1.52
COPB1-211ENST00000534234 MRPL54Q6P161 138 aaKnown RBP5.56□□□□□ -1.52
COPB1-211ENST00000534234 Q6ZUT4 128 aa5.56□□□□□ -1.52
COPB1-211ENST00000534234 LOC107984640A0A0U1RRK4 108 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 D6R8Y8 96 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 F8W036 122 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 S100A8P05109 93 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 PTTG1IPP53801 180 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 RPL39P62891 51 aaKnown RBP5.55□□□□□ -1.52
COPB1-211ENST00000534234 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 APOMO95445 188 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 HBBP68871 147 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 Q6ZRP5 223 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 C2orf48Q96LS8 159 aa5.55□□□□□ -1.52
COPB1-211ENST00000534234 LINC01600Q96MT4 127 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms