RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	SPANXA1	Q9NS26	97 aa		14.3	□□□□□ -0.12
PABPC4-225	ENST00000531243	TRAV8-4	A0A0B4J246	113 aa		14.29	□□□□□ -0.12
PABPC4-225	ENST00000531243	ENHO	Q6UWT2	76 aa		14.29	□□□□□ -0.12
PABPC4-225	ENST00000531243	RYR2	Q92736	4967 aa		14.29	□□□□□ -0.12
PABPC4-225	ENST00000531243	IGKV2D-24	A0A075B6R9	120 aa		14.28	□□□□□ -0.12
PABPC4-225	ENST00000531243	PRSS29P	A6NIE9	313 aa		14.28	□□□□□ -0.12
PABPC4-225	ENST00000531243	C2orf66	Q6UXQ4	117 aa		14.28	□□□□□ -0.12
PABPC4-225	ENST00000531243	ZNF664	Q8N3J9	261 aa		14.28	□□□□□ -0.12
PABPC4-225	ENST00000531243	AP5S1	Q9NUS5	200 aa		14.28	□□□□□ -0.12
PABPC4-225	ENST00000531243	LINC01546	A6NGU7	62 aa		14.27	□□□□□ -0.13
PABPC4-225	ENST00000531243	LINC00614	P0C842	121 aa		14.27	□□□□□ -0.13
PABPC4-225	ENST00000531243	RPL39	P62891	51 aa	Known RBP	14.27	□□□□□ -0.13
PABPC4-225	ENST00000531243	CLPSL2	Q6UWE3	100 aa		14.27	□□□□□ -0.13
PABPC4-225	ENST00000531243	CDC42SE2	Q9NRR3	84 aa		14.27	□□□□□ -0.13
PABPC4-225	ENST00000531243		Q6ZRN7	208 aa	Predicted RBP	14.26	□□□□□ -0.13
PABPC4-225	ENST00000531243	PYGO1	Q9Y3Y4	419 aa		14.26	□□□□□ -0.13
PABPC4-225	ENST00000531243	EREG	O14944	169 aa		14.25	□□□□□ -0.13
PABPC4-225	ENST00000531243	IGKV3OR2-268	A0A0C4DH90	116 aa		14.24	□□□□□ -0.13
PABPC4-225	ENST00000531243	NPS	P0C0P6	89 aa		14.24	□□□□□ -0.13
PABPC4-225	ENST00000531243	CCL25	O15444	150 aa		14.23	□□□□□ -0.13
PABPC4-225	ENST00000531243	MRPS36	P82909	103 aa	Known RBP	14.23	□□□□□ -0.13
PABPC4-225	ENST00000531243	SS18	Q15532	418 aa		14.23	□□□□□ -0.13
PABPC4-225	ENST00000531243	PAPPA-AS1	Q5QFB9	102 aa		14.23	□□□□□ -0.13
PABPC4-225	ENST00000531243		Q6ZN92	141 aa		14.22	□□□□□ -0.13
PABPC4-225	ENST00000531243	BAGE3	Q86Y29	109 aa		14.22	□□□□□ -0.13
PABPC4-225	ENST00000531243	TOMM6	Q96B49	74 aa		14.22	□□□□□ -0.13
PABPC4-225	ENST00000531243	CHCHD1	Q96BP2	118 aa	Known RBP	14.21	□□□□□ -0.13
PABPC4-225	ENST00000531243	IGLV10-54	A0A075B6I4	117 aa		14.2	□□□□□ -0.14
PABPC4-225	ENST00000531243	TNP2	Q05952	138 aa		14.2	□□□□□ -0.14
PABPC4-225	ENST00000531243		Q6ZUT4	128 aa		14.2	□□□□□ -0.14
PABPC4-225	ENST00000531243	TMEM141	Q96I45	108 aa		14.2	□□□□□ -0.14
PABPC4-225	ENST00000531243	SCGB3A1	Q96QR1	104 aa		14.19	□□□□□ -0.14
PABPC4-225	ENST00000531243	TIMM17A	Q99595	171 aa		14.19	□□□□□ -0.14
PABPC4-225	ENST00000531243	RYR3	Q15413	4870 aa		14.18	□□□□□ -0.14
PABPC4-225	ENST00000531243	LINC00959	A0A1B0GUT2	108 aa		14.18	□□□□□ -0.14
PABPC4-225	ENST00000531243	C1orf196	B1AJZ1	125 aa		14.18	□□□□□ -0.14
PABPC4-225	ENST00000531243	TEX43	Q6ZNM6	134 aa		14.18	□□□□□ -0.14
PABPC4-225	ENST00000531243	ERAS	Q7Z444	233 aa		14.18	□□□□□ -0.14
PABPC4-225	ENST00000531243	HBD	P02042	147 aa		14.17	□□□□□ -0.14
PABPC4-225	ENST00000531243	URB1-AS1	Q96HZ7	61 aa		14.17	□□□□□ -0.14
PABPC4-225	ENST00000531243	C2orf88	Q9BSF0	95 aa		14.17	□□□□□ -0.14
PABPC4-225	ENST00000531243	IGLV4-3	A0A075B6K6	122 aa		14.16	□□□□□ -0.14
PABPC4-225	ENST00000531243	RNASE13	Q5GAN3	156 aa	Known RBP	14.16	□□□□□ -0.14
PABPC4-225	ENST00000531243	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	14.16	□□□□□ -0.14
PABPC4-225	ENST00000531243	VCX2	Q9H322	139 aa		14.16	□□□□□ -0.14
PABPC4-225	ENST00000531243		A0A087WTM6	91 aa		14.15	□□□□□ -0.14
PABPC4-225	ENST00000531243	TRAV13-1	A0A0B4J241	112 aa		14.15	□□□□□ -0.14
PABPC4-225	ENST00000531243	IGIP	A6NJ69	53 aa		14.15	□□□□□ -0.14
PABPC4-225	ENST00000531243	IFITM10	A6NMD0	228 aa		14.15	□□□□□ -0.14
PABPC4-225	ENST00000531243	HSBP1	O75506	76 aa		14.15	□□□□□ -0.14
PABPC4-225	ENST00000531243	OPRPN	Q99935	248 aa	Predicted RBP	14.15	□□□□□ -0.14
PABPC4-225	ENST00000531243	C14orf177	Q52M58	125 aa		14.14	□□□□□ -0.15
PABPC4-225	ENST00000531243	GAGE12H	A6NDE8	117 aa		14.13	□□□□□ -0.15
PABPC4-225	ENST00000531243	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	14.13	□□□□□ -0.15
PABPC4-225	ENST00000531243	BAALC	Q8WXS3	180 aa		14.13	□□□□□ -0.15
PABPC4-225	ENST00000531243	XCL1	P47992	114 aa		14.12	□□□□□ -0.15
PABPC4-225	ENST00000531243	CD164L2	Q6UWJ8	174 aa		14.12	□□□□□ -0.15
PABPC4-225	ENST00000531243	LRCOL1	A6NCL2	159 aa		14.11	□□□□□ -0.15
PABPC4-225	ENST00000531243	ATP5L	O75964	103 aa		14.11	□□□□□ -0.15
PABPC4-225	ENST00000531243	CFAP161	Q6P656	301 aa		14.11	□□□□□ -0.15
PABPC4-225	ENST00000531243	KRTAP26-1	Q6PEX3	210 aa		14.11	□□□□□ -0.15
PABPC4-225	ENST00000531243	FAM104A	Q969W3	186 aa		14.11	□□□□□ -0.15
PABPC4-225	ENST00000531243	AMELX	Q99217	191 aa		14.11	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BK	O60814	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BJ	P06899	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BO	P23527	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BB	P33778	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BD	P58876	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BC	P62807	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	PMCHL1	Q16048	86 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST2H2BE	Q16778	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	MAPKAPK5-AS1	Q8N8E1	139 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BH	Q93079	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BN	Q99877	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243	HIST1H2BM	Q99879	126 aa		14.1	□□□□□ -0.15
PABPC4-225	ENST00000531243		A0A096LNJ9	63 aa		14.09	□□□□□ -0.15
PABPC4-225	ENST00000531243	SEC11A	P67812	179 aa		14.09	□□□□□ -0.15
PABPC4-225	ENST00000531243	SERF1A	O75920	110 aa		14.08	□□□□□ -0.16
PABPC4-225	ENST00000531243		Q8N814	137 aa		14.08	□□□□□ -0.16
PABPC4-225	ENST00000531243		A0A1B0GVY2	172 aa		14.07	□□□□□ -0.16
PABPC4-225	ENST00000531243	FOXI1	Q12951	378 aa		14.07	□□□□□ -0.16
PABPC4-225	ENST00000531243	PDZD11	Q5EBL8	140 aa		14.07	□□□□□ -0.16
PABPC4-225	ENST00000531243	USP17L23	D6RBM5	183 aa		14.06	□□□□□ -0.16
PABPC4-225	ENST00000531243	LECT2	O14960	151 aa		14.06	□□□□□ -0.16
PABPC4-225	ENST00000531243	MAL	P21145	153 aa		14.06	□□□□□ -0.16
PABPC4-225	ENST00000531243	PMVK	Q15126	192 aa		14.06	□□□□□ -0.16
PABPC4-225	ENST00000531243	NTN5	Q8WTR8	489 aa	Predicted RBP	14.06	□□□□□ -0.16
PABPC4-225	ENST00000531243	PGPEP1	Q9NXJ5	209 aa		14.06	□□□□□ -0.16
PABPC4-225	ENST00000531243	UBE2D1	P51668	147 aa		14.05	□□□□□ -0.16
PABPC4-225	ENST00000531243	CDPF1	Q6NVV7	123 aa		14.05	□□□□□ -0.16
PABPC4-225	ENST00000531243	LINC00173	Q6ZV60	143 aa		14.05	□□□□□ -0.16
PABPC4-225	ENST00000531243	SPATA12	Q7Z6I5	190 aa		14.05	□□□□□ -0.16
PABPC4-225	ENST00000531243	DNAH2	Q9P225	4427 aa		14.05	□□□□□ -0.16
PABPC4-225	ENST00000531243	FRAS1	Q86XX4	4008 aa		14.05	□□□□□ -0.16
PABPC4-225	ENST00000531243	COX7A2L	O14548	114 aa		14.04	□□□□□ -0.16
PABPC4-225	ENST00000531243	APOM	O95445	188 aa		14.04	□□□□□ -0.16
PABPC4-225	ENST00000531243	FAM19A2	Q8N3H0	131 aa		14.04	□□□□□ -0.16
PABPC4-225	ENST00000531243	NDUFA6	P56556	154 aa		14.03	□□□□□ -0.16
PABPC4-225	ENST00000531243	HERVK_113	P63121	156 aa		14.03	□□□□□ -0.16

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