RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 TSHBP01222 138 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 CAMPP49913 170 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 Q6ZRP5 223 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 ISOC2Q96AB3 205 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 LRP2P98164 4655 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 C7orf77A4D0Y5 90 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 GAGE2BQ13066 116 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 FCER1GP30273 86 aa9.84□□□□□ -0.83
CHMP4A-204ENST00000530996 CD164L2Q6UWJ8 174 aa9.84□□□□□ -0.83
CHMP4A-204ENST00000530996 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 TMEM250H0YL14 139 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 GAS8-AS1O95177 125 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 ESDP10768 282 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 PTTG1IPP53801 180 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 FAM231DQ6ZW35 169 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 MRPL52Q86TS9 123 aaKnown RBP9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 ZNF664Q8N3J9 261 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 TNXBP22105 4242 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 IGLV4-69A0A075B6H9 119 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 A0A1B0GUT8 65 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 HIGD1CA8MV81 97 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 COX7A2LO14548 114 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 RPL18AQ02543 176 aaKnown RBP9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 CT83Q5H943 113 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 CDC42SE2Q9NRR3 84 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 RNF213Q63HN8 5207 aa9.81□□□□□ -0.84
CHMP4A-204ENST00000530996 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-204ENST00000530996 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 MT-ND6P03923 174 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 SMAGPQ0VAQ4 97 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 ALKAL2Q6UX46 152 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 AMN1Q8IY45 258 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 FAM210AQ96ND0 272 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 SMIM7Q9BQ49 75 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 TMEM191AQ9H0A3 160 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 TRBV27A0A0K0K1C4 114 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 C1orf196B1AJZ1 125 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 SMKR1H3BMG3 65 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 BLOC1S1P78537 153 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 TSKUQ8WUA8 353 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 APOMO95445 188 aa9.78□□□□□ -0.84
CHMP4A-204ENST00000530996 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
CHMP4A-204ENST00000530996 EIF5A2Q9GZV4 153 aaKnown RBP9.78□□□□□ -0.84
CHMP4A-204ENST00000530996 RAB4AP20338 218 aa9.77□□□□□ -0.85
CHMP4A-204ENST00000530996 POLR2KP53803 58 aaKnown RBP9.77□□□□□ -0.85
CHMP4A-204ENST00000530996 SPAG11BQ08648 103 aa9.77□□□□□ -0.85
CHMP4A-204ENST00000530996 NUP35Q8NFH5 326 aa9.77□□□□□ -0.85
CHMP4A-204ENST00000530996 VCYO14598 125 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 KRTAP10-8P60410 259 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 SRSF9Q13242 221 aaKnown RBP eCLIP9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 RIGQ13278 110 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 Q6ZUT4 128 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 C5orf38Q86SI9 138 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 LINC01551Q86U37 167 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 UBE2D4Q9Y2X8 147 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 ZNF727A8MUV8 499 aa9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 PPP1R17O96001 155 aa9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 SUMO2P61956 95 aaKnown RBP9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 C9orf116Q5BN46 136 aaPredicted RBP9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 TMEM18Q96B42 140 aa9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.74□□□□□ -0.85
CHMP4A-204ENST00000530996 C1orf137Q5JT78 98 aa9.74□□□□□ -0.85
CHMP4A-204ENST00000530996 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
CHMP4A-204ENST00000530996 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
CHMP4A-204ENST00000530996 PPP1R2P9O14990 202 aa9.73□□□□□ -0.85
CHMP4A-204ENST00000530996 PHF5AQ7RTV0 110 aaKnown RBP9.73□□□□□ -0.85
CHMP4A-204ENST00000530996 C2orf48Q96LS8 159 aa9.73□□□□□ -0.85
CHMP4A-204ENST00000530996 OSTCQ9NRP0 149 aa9.73□□□□□ -0.85
CHMP4A-204ENST00000530996 AKAP14Q86UN6 197 aa9.72□□□□□ -0.85
CHMP4A-204ENST00000530996 NRACQ8N912 160 aa9.72□□□□□ -0.85
CHMP4A-204ENST00000530996 ORAOV1Q8WV07 137 aa9.72□□□□□ -0.85
CHMP4A-204ENST00000530996 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
CHMP4A-204ENST00000530996 OR10D4PQ8NGN7 298 aa9.71□□□□□ -0.86
CHMP4A-204ENST00000530996 NAT8BQ9UHF3 227 aa9.7□□□□□ -0.86
CHMP4A-204ENST00000530996 V9GYV3 84 aa9.7□□□□□ -0.86
CHMP4A-204ENST00000530996 hCG_2014768A0A024R1R8 64 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 A0A087WZ39 114 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 IFITM10A6NMD0 228 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 NDUFA1O15239 70 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 ADIRFQ15847 76 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 TCAPO15273 167 aa9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 SRP19P09132 144 aaKnown RBP9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 CKS2P33552 79 aa9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 FAM104BQ5XKR9 115 aa9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 HBBP68871 147 aa9.66□□□□□ -0.86
CHMP4A-204ENST00000530996 RNF151Q2KHN1 245 aa9.66□□□□□ -0.86
CHMP4A-204ENST00000530996 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
CHMP4A-204ENST00000530996 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms