RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	TMEM223	A0PJW6	202 aa		10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	RPL35A	P18077	110 aa	Known RBP	10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	JPT2	Q9H910	190 aa		10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	IGHV3-16	A0A0C4DH30	117 aa		10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	RBMY1B	A6NDE4	496 aa	Known RBP	10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	RBMY1E	A6NEQ0	496 aa	Known RBP	10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	SPINK8	P0C7L1	97 aa		10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	RBMY1D	P0C7P1	496 aa	Known RBP	10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	EMP1	P54849	157 aa		10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	LINC01600	Q96MT4	127 aa		10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540	MDFIC	Q9P1T7	246 aa		10.53	□□□□□ -0.72
NR1H3-231	ENST00000529540		P0DMU3	169 aa		10.52	□□□□□ -0.73
NR1H3-231	ENST00000529540	FAM231A	P0DMU4	169 aa		10.52	□□□□□ -0.73
NR1H3-231	ENST00000529540	FAM231C	P0DMU5	169 aa		10.52	□□□□□ -0.73
NR1H3-231	ENST00000529540		A0A087WWL8	130 aa		10.51	□□□□□ -0.73
NR1H3-231	ENST00000529540		F5H697	171 aa		10.51	□□□□□ -0.73
NR1H3-231	ENST00000529540		M0QY20	66 aa		10.51	□□□□□ -0.73
NR1H3-231	ENST00000529540	MT-ATP8	P03928	68 aa		10.51	□□□□□ -0.73
NR1H3-231	ENST00000529540	TMEM263	Q8WUH6	116 aa	Known RBP	10.51	□□□□□ -0.73
NR1H3-231	ENST00000529540	PTH2	Q96A98	100 aa		10.51	□□□□□ -0.73
NR1H3-231	ENST00000529540	PKD1L1	Q8TDX9	2849 aa		10.51	□□□□□ -0.73
NR1H3-231	ENST00000529540	TMEM262	E9PQX1	116 aa		10.5	□□□□□ -0.73
NR1H3-231	ENST00000529540	IGHV3-33	P01772	117 aa		10.5	□□□□□ -0.73
NR1H3-231	ENST00000529540	XG	P55808	180 aa		10.5	□□□□□ -0.73
NR1H3-231	ENST00000529540	SFTA2	Q6UW10	78 aa		10.5	□□□□□ -0.73
NR1H3-231	ENST00000529540	ANKRD29	Q8N6D5	301 aa		10.5	□□□□□ -0.73
NR1H3-231	ENST00000529540	TRAV12-2	A0A075B6T6	113 aa		10.5	□□□□□ -0.73
NR1H3-231	ENST00000529540	GEMIN7	Q9H840	131 aa	Known RBP	10.5	□□□□□ -0.73
NR1H3-231	ENST00000529540	XCL2	Q9UBD3	114 aa		10.5	□□□□□ -0.73
NR1H3-231	ENST00000529540	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.49	□□□□□ -0.73
NR1H3-231	ENST00000529540	TRAV12-3	A0A0B4J271	114 aa		10.49	□□□□□ -0.73
NR1H3-231	ENST00000529540		A4D1N5	150 aa		10.49	□□□□□ -0.73
NR1H3-231	ENST00000529540		M0R2P5	195 aa		10.49	□□□□□ -0.73
NR1H3-231	ENST00000529540	SCGB1C2	P0DMR2	95 aa		10.49	□□□□□ -0.73
NR1H3-231	ENST00000529540	ZNF22	P17026	224 aa	Predicted RBP	10.49	□□□□□ -0.73
NR1H3-231	ENST00000529540	C20orf203	Q8NBC4	194 aa		10.49	□□□□□ -0.73
NR1H3-231	ENST00000529540	EDA2R	Q9HAV5	297 aa		10.49	□□□□□ -0.73
NR1H3-231	ENST00000529540	RHOD	O00212	210 aa		10.48	□□□□□ -0.73
NR1H3-231	ENST00000529540	EIF4EBP3	O60516	100 aa	Predicted RBP	10.48	□□□□□ -0.73
NR1H3-231	ENST00000529540	MUC4	Q99102	2169 aa		10.48	□□□□□ -0.73
NR1H3-231	ENST00000529540	LINC00467	Q9BRT7	94 aa		10.48	□□□□□ -0.73
NR1H3-231	ENST00000529540	MGAM2	Q2M2H8	2515 aa		10.48	□□□□□ -0.73
NR1H3-231	ENST00000529540	SLC25A20	O43772	301 aa		10.47	□□□□□ -0.73
NR1H3-231	ENST00000529540	ZNF56	Q15929	161 aa		10.47	□□□□□ -0.73
NR1H3-231	ENST00000529540	ERG28	Q9UKR5	140 aa		10.47	□□□□□ -0.73
NR1H3-231	ENST00000529540		I3L3M4	83 aa		10.47	□□□□□ -0.73
NR1H3-231	ENST00000529540		K7EIL1	84 aa		10.47	□□□□□ -0.73
NR1H3-231	ENST00000529540	GIG44	P09565	113 aa	Predicted RBP	10.47	□□□□□ -0.73
NR1H3-231	ENST00000529540	LINC01587	Q99440	93 aa		10.47	□□□□□ -0.73
NR1H3-231	ENST00000529540	IGLV4-3	A0A075B6K6	122 aa		10.46	□□□□□ -0.74
NR1H3-231	ENST00000529540	IGHV1OR15-1	A0A075B7D0	117 aa		10.46	□□□□□ -0.74
NR1H3-231	ENST00000529540	DEFB121	Q5J5C9	76 aa		10.46	□□□□□ -0.74
NR1H3-231	ENST00000529540	CSNK1G2-AS1	Q8NCQ2	148 aa		10.46	□□□□□ -0.74
NR1H3-231	ENST00000529540	PYGO1	Q9Y3Y4	419 aa		10.46	□□□□□ -0.74
NR1H3-231	ENST00000529540	TRGV11	A0A075B6L2	103 aa		10.45	□□□□□ -0.74
NR1H3-231	ENST00000529540	SMIM9	A6NGZ8	99 aa		10.45	□□□□□ -0.74
NR1H3-231	ENST00000529540	FAM74A4	Q5TZK3	123 aa		10.45	□□□□□ -0.74
NR1H3-231	ENST00000529540	MUSTN1	Q8IVN3	82 aa		10.45	□□□□□ -0.74
NR1H3-231	ENST00000529540	CMYA5	Q8N3K9	4069 aa		10.45	□□□□□ -0.74
NR1H3-231	ENST00000529540	ATXN8	Q156A1	80 aa		10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540	DNHD1	Q96M86	4753 aa		10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540	TRAV26-1	A0A087WT03	109 aa		10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540		A0A0J9YXY3	114 aa		10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540		C9JAW5	83 aa		10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540	C1orf158	Q8N1D5	194 aa		10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540	MRAP	Q8TCY5	172 aa		10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540	DEFB104A	Q8WTQ1	72 aa		10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540	OPRPN	Q99935	248 aa	Predicted RBP	10.44	□□□□□ -0.74
NR1H3-231	ENST00000529540		A0A0J9YXV3	536 aa		10.43	□□□□□ -0.74
NR1H3-231	ENST00000529540	TRBV30	A0A0K0K1B3	111 aa		10.43	□□□□□ -0.74
NR1H3-231	ENST00000529540	PRB2	P02812	416 aa	Predicted RBP	10.43	□□□□□ -0.74
NR1H3-231	ENST00000529540	RBMY1A1	P0DJD3	496 aa	Known RBP	10.43	□□□□□ -0.74
NR1H3-231	ENST00000529540	RBMY1C	P0DJD4	496 aa		10.43	□□□□□ -0.74
NR1H3-231	ENST00000529540	RBMY1F	Q15415	496 aa	Known RBP	10.43	□□□□□ -0.74
NR1H3-231	ENST00000529540	RNF183	Q96D59	192 aa		10.43	□□□□□ -0.74
NR1H3-231	ENST00000529540	IGHV3OR16-12	A0A075B7B8	117 aa		10.42	□□□□□ -0.74
NR1H3-231	ENST00000529540	RPL13A	P40429	203 aa	Known RBP	10.42	□□□□□ -0.74
NR1H3-231	ENST00000529540	DEFB135	Q30KP9	77 aa		10.42	□□□□□ -0.74
NR1H3-231	ENST00000529540	LINC01620	Q4KN68	170 aa		10.42	□□□□□ -0.74
NR1H3-231	ENST00000529540	LITAF	Q99732	161 aa		10.42	□□□□□ -0.74
NR1H3-231	ENST00000529540	SPANXD	Q9BXN6	97 aa		10.42	□□□□□ -0.74
NR1H3-231	ENST00000529540	SPANXC	Q9NY87	97 aa		10.42	□□□□□ -0.74
NR1H3-231	ENST00000529540	MRPS36	P82909	103 aa	Known RBP	10.41	□□□□□ -0.74
NR1H3-231	ENST00000529540	ZFAND6	Q6FIF0	208 aa		10.41	□□□□□ -0.74
NR1H3-231	ENST00000529540	C16orf74	Q96GX8	76 aa		10.41	□□□□□ -0.74
NR1H3-231	ENST00000529540	TRBV10-2	A0A0K0K1G8	114 aa		10.41	□□□□□ -0.74
NR1H3-231	ENST00000529540	MIF	P14174	115 aa		10.41	□□□□□ -0.74
NR1H3-231	ENST00000529540	ZNF415	Q09FC8	603 aa		10.41	□□□□□ -0.74
NR1H3-231	ENST00000529540	IGHV3-30-3	P0DP02	117 aa		10.4	□□□□□ -0.74
NR1H3-231	ENST00000529540	HTN1	P15515	57 aa		10.4	□□□□□ -0.74
NR1H3-231	ENST00000529540	TIMM21	Q9BVV7	248 aa		10.4	□□□□□ -0.74
NR1H3-231	ENST00000529540	NOTCH1	P46531	2555 aa		10.39	□□□□□ -0.75
NR1H3-231	ENST00000529540	NBEAL1	Q6ZS30	2694 aa		10.39	□□□□□ -0.75
NR1H3-231	ENST00000529540	FAM104A	Q969W3	186 aa		10.39	□□□□□ -0.75
NR1H3-231	ENST00000529540	IGHV1-58	A0A0C4DH39	117 aa		10.38	□□□□□ -0.75
NR1H3-231	ENST00000529540		Q1RN00	199 aa		10.38	□□□□□ -0.75
NR1H3-231	ENST00000529540		Q6Q795	121 aa		10.38	□□□□□ -0.75
NR1H3-231	ENST00000529540	B9D2	Q9BPU9	175 aa		10.38	□□□□□ -0.75
NR1H3-231	ENST00000529540	SPX	Q9BT56	116 aa		10.38	□□□□□ -0.75
NR1H3-231	ENST00000529540	IGHV3-64	A0A075B6Q5	118 aa		10.38	□□□□□ -0.75

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