RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 HBBP68871 147 aa21.28■■□□□ 1
SSSCA1-205ENST00000527920 SDIM1Q6ZPB5 146 aa21.28■■□□□ 1
SSSCA1-205ENST00000527920 C15orf56Q8N910 161 aa21.28■■□□□ 1
SSSCA1-205ENST00000527920 TRBV24-1A0A075B6N3 115 aa21.27■■□□□ 1
SSSCA1-205ENST00000527920 TRAV16A0A0A6YYK6 109 aaPredicted RBP21.27■■□□□ 1
SSSCA1-205ENST00000527920 A0A1B0GXF2 115 aa21.27■■□□□ 1
SSSCA1-205ENST00000527920 FCER1GP30273 86 aa21.27■■□□□ 1
SSSCA1-205ENST00000527920 KIR2DL4Q99706 377 aa21.27■■□□□ 1
SSSCA1-205ENST00000527920 C20orf78Q9BR46 151 aa21.27■■□□□ 1
SSSCA1-205ENST00000527920 F8W036 122 aa21.26■□□□□ 0.99
SSSCA1-205ENST00000527920 RPL32P62910 135 aaKnown RBP21.26■□□□□ 0.99
SSSCA1-205ENST00000527920 CDC42SE2Q9NRR3 84 aa21.25■□□□□ 0.99
SSSCA1-205ENST00000527920 DMBT1Q9UGM3 2413 aaPredicted RBP21.25■□□□□ 0.99
SSSCA1-205ENST00000527920 MYCBP2O75592 4640 aa21.24■□□□□ 0.99
SSSCA1-205ENST00000527920 SMAGPQ0VAQ4 97 aa21.24■□□□□ 0.99
SSSCA1-205ENST00000527920 PNRC1Q12796 327 aaPredicted RBP21.24■□□□□ 0.99
SSSCA1-205ENST00000527920 MRPL54Q6P161 138 aaKnown RBP21.24■□□□□ 0.99
SSSCA1-205ENST00000527920 CSDC2Q9Y534 153 aaKnown RBP21.24■□□□□ 0.99
SSSCA1-205ENST00000527920 LINC00959A0A1B0GUT2 108 aa21.23■□□□□ 0.99
SSSCA1-205ENST00000527920 SLPIP03973 132 aa21.23■□□□□ 0.99
SSSCA1-205ENST00000527920 CKS2P33552 79 aa21.23■□□□□ 0.99
SSSCA1-205ENST00000527920 FOXI1Q12951 378 aa21.23■□□□□ 0.99
SSSCA1-205ENST00000527920 ATP5L2Q7Z4Y8 100 aa21.23■□□□□ 0.99
SSSCA1-205ENST00000527920 IGHV3-64A0A075B6Q5 118 aa21.21■□□□□ 0.99
SSSCA1-205ENST00000527920 TCAPO15273 167 aa21.21■□□□□ 0.99
SSSCA1-205ENST00000527920 ZNF664Q8N3J9 261 aa21.21■□□□□ 0.99
SSSCA1-205ENST00000527920 CIRBPQ14011 172 aaKnown RBP21.2■□□□□ 0.98
SSSCA1-205ENST00000527920 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP21.2■□□□□ 0.98
SSSCA1-205ENST00000527920 GVQW2A0A096LPI5 108 aaPredicted RBP21.19■□□□□ 0.98
SSSCA1-205ENST00000527920 PPBPP02775 128 aa21.19■□□□□ 0.98
SSSCA1-205ENST00000527920 PHOX2AO14813 284 aa21.18■□□□□ 0.98
SSSCA1-205ENST00000527920 TNFRSF6BO95407 300 aa21.18■□□□□ 0.98
SSSCA1-205ENST00000527920 XCL1P47992 114 aa21.18■□□□□ 0.98
SSSCA1-205ENST00000527920 SS18Q15532 418 aa21.18■□□□□ 0.98
SSSCA1-205ENST00000527920 UBE2D4Q9Y2X8 147 aa21.18■□□□□ 0.98
SSSCA1-205ENST00000527920 CCL25O15444 150 aa21.17■□□□□ 0.98
SSSCA1-205ENST00000527920 CLLU1Q5K131 121 aa21.17■□□□□ 0.98
SSSCA1-205ENST00000527920 TMEM18Q96B42 140 aa21.17■□□□□ 0.98
SSSCA1-205ENST00000527920 TIMM21Q9BVV7 248 aa21.17■□□□□ 0.98
SSSCA1-205ENST00000527920 D6R8Y8 96 aa21.16■□□□□ 0.98
SSSCA1-205ENST00000527920 PANO1I0J062 215 aa21.15■□□□□ 0.98
SSSCA1-205ENST00000527920 KRTAP10-4P60372 401 aaPredicted RBP21.15■□□□□ 0.98
SSSCA1-205ENST00000527920 CD164L2Q6UWJ8 174 aa21.15■□□□□ 0.98
SSSCA1-205ENST00000527920 SMIM2Q9BVW6 85 aa21.15■□□□□ 0.98
SSSCA1-205ENST00000527920 HIGD2BQ4VC39 106 aa21.14■□□□□ 0.97
SSSCA1-205ENST00000527920 ANAPC16Q96DE5 110 aa21.14■□□□□ 0.97
SSSCA1-205ENST00000527920 MT-ND4LP03901 98 aa21.13■□□□□ 0.97
SSSCA1-205ENST00000527920 IGHV1-58A0A0C4DH39 117 aa21.11■□□□□ 0.97
SSSCA1-205ENST00000527920 C1orf196B1AJZ1 125 aa21.1■□□□□ 0.97
SSSCA1-205ENST00000527920 NPYP01303 97 aa21.1■□□□□ 0.97
SSSCA1-205ENST00000527920 ORMDL3Q8N138 153 aa21.1■□□□□ 0.97
SSSCA1-205ENST00000527920 HERC1Q15751 4861 aa21.07■□□□□ 0.96
SSSCA1-205ENST00000527920 SPACA4Q8TDM5 124 aa21.07■□□□□ 0.96
SSSCA1-205ENST00000527920 TMEM136Q6ZRR5 245 aa21.05■□□□□ 0.96
SSSCA1-205ENST00000527920 Q6ZUT4 128 aa21.05■□□□□ 0.96
SSSCA1-205ENST00000527920 RPL37AP61513 92 aaKnown RBP21.04■□□□□ 0.96
SSSCA1-205ENST00000527920 PRELID3AQ96N28 172 aa21.04■□□□□ 0.96
SSSCA1-205ENST00000527920 SPANXA1Q9NS26 97 aa21.04■□□□□ 0.96
SSSCA1-205ENST00000527920 LAMTOR2Q9Y2Q5 125 aa21.04■□□□□ 0.96
SSSCA1-205ENST00000527920 UQCC3Q6UW78 93 aa21.03■□□□□ 0.96
SSSCA1-205ENST00000527920 COX6A2Q02221 97 aa21.02■□□□□ 0.96
SSSCA1-205ENST00000527920 CHTF8P0CG12 524 aa21.01■□□□□ 0.95
SSSCA1-205ENST00000527920 RPL39P62891 51 aaKnown RBP21.01■□□□□ 0.95
SSSCA1-205ENST00000527920 RNASE13Q5GAN3 156 aaKnown RBP21.01■□□□□ 0.95
SSSCA1-205ENST00000527920 PKIGQ9Y2B9 76 aa21.01■□□□□ 0.95
SSSCA1-205ENST00000527920 A0A087WYN8 130 aa21■□□□□ 0.95
SSSCA1-205ENST00000527920 TRAV13-1A0A0B4J241 112 aa21■□□□□ 0.95
SSSCA1-205ENST00000527920 PRSS47A8MTI9 375 aa21■□□□□ 0.95
SSSCA1-205ENST00000527920 COX7A2LO14548 114 aa21■□□□□ 0.95
SSSCA1-205ENST00000527920 MRPS36P82909 103 aaKnown RBP21■□□□□ 0.95
SSSCA1-205ENST00000527920 IFITM2Q01629 132 aa21■□□□□ 0.95
SSSCA1-205ENST00000527920 KRTAP29-1A8MX34 341 aaPredicted RBP20.99■□□□□ 0.95
SSSCA1-205ENST00000527920 DPH3Q96FX2 82 aa20.99■□□□□ 0.95
SSSCA1-205ENST00000527920 PLAC8Q9NZF1 115 aa20.99■□□□□ 0.95
SSSCA1-205ENST00000527920 ZNF561-AS1K7EIQ3 104 aa20.98■□□□□ 0.95
SSSCA1-205ENST00000527920 PRSS3P2Q8NHM4 247 aa20.98■□□□□ 0.95
SSSCA1-205ENST00000527920 RAB5AP20339 215 aa20.97■□□□□ 0.95
SSSCA1-205ENST00000527920 FAM104AQ969W3 186 aa20.97■□□□□ 0.95
SSSCA1-205ENST00000527920 IMMP2LQ96T52 175 aa20.97■□□□□ 0.95
SSSCA1-205ENST00000527920 MALP21145 153 aa20.96■□□□□ 0.95
SSSCA1-205ENST00000527920 CARD19Q96LW7 228 aa20.96■□□□□ 0.95
SSSCA1-205ENST00000527920 TMEM218A2RU14 115 aa20.95■□□□□ 0.94
SSSCA1-205ENST00000527920 ADCYAP1P18509 176 aa20.94■□□□□ 0.94
SSSCA1-205ENST00000527920 LINC00526Q96FQ7 95 aa20.94■□□□□ 0.94
SSSCA1-205ENST00000527920 J3QL48 77 aa20.93■□□□□ 0.94
SSSCA1-205ENST00000527920 SYCNQ0VAF6 134 aa20.93■□□□□ 0.94
SSSCA1-205ENST00000527920 MAP1LC3AQ9H492 121 aa20.93■□□□□ 0.94
SSSCA1-205ENST00000527920 LINC00474Q9P2X8 69 aa20.93■□□□□ 0.94
SSSCA1-205ENST00000527920 PYGO1Q9Y3Y4 419 aa20.92■□□□□ 0.94
SSSCA1-205ENST00000527920 CTDSP1Q9GZU7 261 aa20.91■□□□□ 0.94
SSSCA1-205ENST00000527920 APOMO95445 188 aa20.9■□□□□ 0.94
SSSCA1-205ENST00000527920 MAJINQ3KP22 176 aa20.9■□□□□ 0.94
SSSCA1-205ENST00000527920 IGKV2-24A0A0C4DH68 120 aa20.89■□□□□ 0.93
SSSCA1-205ENST00000527920 IGLV4-69A0A075B6H9 119 aa20.88■□□□□ 0.93
SSSCA1-205ENST00000527920 A0A096LNI7 61 aa20.88■□□□□ 0.93
SSSCA1-205ENST00000527920 IFI27P40305 119 aaPredicted RBP20.88■□□□□ 0.93
SSSCA1-205ENST00000527920 C5orf38Q86SI9 138 aa20.88■□□□□ 0.93
SSSCA1-205ENST00000527920 C2orf48Q96LS8 159 aa20.88■□□□□ 0.93
SSSCA1-205ENST00000527920 OPRPNQ99935 248 aaPredicted RBP20.88■□□□□ 0.93
SSSCA1-205ENST00000527920 TRAV9-1A0A075B6T8 112 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms