RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 SNRPD3P62318 126 aaKnown RBP3.45□□□□□ -1.86
HIPK3-204ENST00000525975 IGFL3Q6UXB1 125 aa3.45□□□□□ -1.86
HIPK3-204ENST00000525975 TRAV13-2A0A0B4J235 113 aa3.45□□□□□ -1.86
HIPK3-204ENST00000525975 IGHV3-38A0A0C4DH36 116 aa3.45□□□□□ -1.86
HIPK3-204ENST00000525975 RBMY1BA6NDE4 496 aaKnown RBP3.45□□□□□ -1.86
HIPK3-204ENST00000525975 RBMY1EA6NEQ0 496 aaKnown RBP3.45□□□□□ -1.86
HIPK3-204ENST00000525975 RBMY1DP0C7P1 496 aaKnown RBP3.45□□□□□ -1.86
HIPK3-204ENST00000525975 RBMY1A1P0DJD3 496 aaKnown RBP3.45□□□□□ -1.86
HIPK3-204ENST00000525975 RBMY1CP0DJD4 496 aa3.45□□□□□ -1.86
HIPK3-204ENST00000525975 RBMY1FQ15415 496 aaKnown RBP3.45□□□□□ -1.86
HIPK3-204ENST00000525975 DEFB124Q8NES8 71 aa3.45□□□□□ -1.86
HIPK3-204ENST00000525975 FAM218AQ96MZ4 157 aa3.45□□□□□ -1.86
HIPK3-204ENST00000525975 C2CD3Q4AC94 2353 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 IGHV3OR16-10A0A075B7F0 116 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 ZNF415Q09FC8 603 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 HIST2H2BCQ6DN03 193 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 HIST2H2BDQ6DRA6 164 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 MOB4Q9Y3A3 225 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 NOTCH3Q9UM47 2321 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 PIEZO1Q92508 2521 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 PIK3CD-AS1Q5SR53 167 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 C5orf56Q8N8D9 126 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 LINC00846Q9NV44 126 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 UBE2D4Q9Y2X8 147 aa3.44□□□□□ -1.86
HIPK3-204ENST00000525975 MAP1AP78559 2803 aaPredicted RBP3.44□□□□□ -1.86
HIPK3-204ENST00000525975 SVEP1Q4LDE5 3571 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 NDUFC2O95298 119 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 PFN2P35080 140 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 PROK1P58294 105 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 C20orf197Q8N268 126 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 LINC00467Q9BRT7 94 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 TRAV23DV6A0A075B6W5 121 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 FAM236DA0A1B0GTK5 79 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 OXTP01178 125 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 FAM236CP0DP71 79 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 C19orf54Q5BKX5 351 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 USMG5Q96IX5 58 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 IGHG2P01859 326 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 ZFP36P26651 326 aaKnown RBP3.43□□□□□ -1.86
HIPK3-204ENST00000525975 UCNP55089 124 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 SOSTDC1Q6X4U4 206 aa3.43□□□□□ -1.86
HIPK3-204ENST00000525975 ATRXP46100 2492 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 NCR3O14931 201 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 LECT2O14960 151 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 LY6EQ16553 131 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 BEAN1Q3B7T3 259 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 Q5XG85 94 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 FHL2Q14192 279 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 KLK9Q2XQG4 91 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 LINC01561Q8N1V8 128 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 UPK3BQ9BT76 320 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 CHCHD7Q9BUK0 85 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 SIRPDQ9H106 197 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 SND1-IT1Q9HBX3 110 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 A0A087WYN8 130 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 H0YGX0 51 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 LINC00158P58513 81 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 PKIGQ9Y2B9 76 aa3.42□□□□□ -1.86
HIPK3-204ENST00000525975 NDUFC2-KCTD14E9PQ53 114 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 RPL28P46779 137 aaKnown RBP3.41□□□□□ -1.86
HIPK3-204ENST00000525975 COX6A2Q02221 97 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 CSMD1Q96PZ7 3565 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 VPS13CQ709C8 3753 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 RNASE1P07998 156 aaKnown RBP3.41□□□□□ -1.86
HIPK3-204ENST00000525975 HILS1P60008 231 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 RPL36AP83881 106 aaKnown RBP3.41□□□□□ -1.86
HIPK3-204ENST00000525975 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 WFDC9Q8NEX5 89 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 RPL36ALQ969Q0 106 aaKnown RBP3.41□□□□□ -1.86
HIPK3-204ENST00000525975 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 ASH1LQ9NR48 2969 aaKnown RBP3.41□□□□□ -1.86
HIPK3-204ENST00000525975 ZFYVE26Q68DK2 2539 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 SMIM1B2RUZ4 78 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 PAX4O43316 350 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 EDN2P20800 178 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 C22orf24Q9Y442 160 aa3.41□□□□□ -1.86
HIPK3-204ENST00000525975 IGLV5-39A0A0G2JS06 123 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 SLPIP03973 132 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 LINC00242Q5T6M2 205 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 ENHOQ6UWT2 76 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.4□□□□□ -1.86
HIPK3-204ENST00000525975 SMIM11BQ8TCY0 68 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 PIMREGQ9BSJ6 248 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 UBL5Q9BZL1 73 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 CSMD2Q7Z408 3487 aa3.4□□□□□ -1.86
HIPK3-204ENST00000525975 ITPR1Q14643 2758 aa3.4□□□□□ -1.87
HIPK3-204ENST00000525975 IGHV3OR16-12A0A075B7B8 117 aa3.4□□□□□ -1.87
HIPK3-204ENST00000525975 IGLV5-45A0A087WSX0 123 aa3.4□□□□□ -1.87
HIPK3-204ENST00000525975 IGKV3OR2-268A0A0C4DH90 116 aa3.4□□□□□ -1.87
HIPK3-204ENST00000525975 J3QLI3 93 aa3.4□□□□□ -1.87
HIPK3-204ENST00000525975 PSMB8P28062 276 aa3.4□□□□□ -1.87
HIPK3-204ENST00000525975 C9orf129Q5T035 196 aaKnown RBP3.4□□□□□ -1.87
HIPK3-204ENST00000525975 BRD3OSQ6XYD6 125 aa3.4□□□□□ -1.87
HIPK3-204ENST00000525975 Q9UF83 564 aa3.4□□□□□ -1.87
HIPK3-204ENST00000525975 SERP1Q9Y6X1 66 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms