RNA–Protein interactions for RNA: ENST00000525799.1

PTPN22-206, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 2,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-206ENST00000525799 MBD5Q9P267 1494 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 ZNF236Q9UL36 1845 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 APC2O95996 2303 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 TNRC6CQ9HCJ0 1690 aaKnown RBP0.35□□□□□ -2.35
PTPN22-206ENST00000525799 EPRSP07814 1512 aaKnown RBP0.35□□□□□ -2.35
PTPN22-206ENST00000525799 FLNCQ14315 2725 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 ZNF469Q96JG9 3925 aaPredicted RBP0.35□□□□□ -2.35
PTPN22-206ENST00000525799 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.35□□□□□ -2.35
PTPN22-206ENST00000525799 CSPG4Q6UVK1 2322 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 TRAV12-2A0A075B6T6 113 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 TRAV12-3A0A0B4J271 114 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 C20orf202A1L168 122 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 CLPSL1A2RUU4 121 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 HCG22E2RYF7 251 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 C9orf116Q5BN46 136 aaPredicted RBP0.35□□□□□ -2.35
PTPN22-206ENST00000525799 C9orf153Q5TBE3 101 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 OR2T2Q6IF00 324 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 MRPL54Q6P161 138 aaKnown RBP0.35□□□□□ -2.35
PTPN22-206ENST00000525799 SPATA8Q6RVD6 105 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 CYP2G1PQ6ZSU1 146 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 KRTAP19-3Q7Z4W3 81 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 PPP1R1CQ8WVI7 109 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 CROCC2H7BZ55 1655 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 NF1P21359 2839 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 DCAF1Q9Y4B6 1507 aa0.35□□□□□ -2.35
PTPN22-206ENST00000525799 PHIPQ8WWQ0 1821 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 LRRC37A3O60309 1634 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 CUL7Q14999 1698 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 A0A096LNT2 108 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 TRAV1-2A0A0B4J238 106 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 MPC2O95563 127 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 C10orf128Q5T292 105 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 PP6455Q8WZ26 134 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 SPTSSAQ969W0 71 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 TMEM141Q96I45 108 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 C2orf88Q9BSF0 95 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 AKAP11Q9UKA4 1901 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 TJP1Q07157 1748 aa0.34□□□□□ -2.35
PTPN22-206ENST00000525799 PSME4Q14997 1843 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 PREX2Q70Z35 1606 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 DAPK1P53355 1430 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 FLNAP21333 2647 aaKnown RBP0.34□□□□□ -2.36
PTPN22-206ENST00000525799 COL4A6Q14031 1691 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 SHPRHQ149N8 1683 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 BPTFQ12830 3046 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 TLN1Q9Y490 2541 aaKnown RBP0.34□□□□□ -2.36
PTPN22-206ENST00000525799 A6NIN4 97 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 C10orf142B7Z368 130 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 SPINK8P0C7L1 97 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 HSD52Q0P140 79 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 SPANXN1Q5VSR9 72 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 TTC9CQ8N5M4 171 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 BPESC1Q9GZL8 116 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 TMEM191AQ9H0A3 160 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 AGPAT4-IT1Q9H0P7 198 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 NPVFQ9HCQ7 196 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 COA4Q9NYJ1 87 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 BET1LQ9NYM9 111 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 LINC00312Q9Y6C7 94 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 PLXNB2O15031 1838 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 AFDNP55196 1824 aaKnown RBP0.34□□□□□ -2.36
PTPN22-206ENST00000525799 SMARCA2P51531 1590 aa0.34□□□□□ -2.36
PTPN22-206ENST00000525799 WNK1Q9H4A3 2382 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 SPTAN1Q13813 2472 aaKnown RBP0.33□□□□□ -2.36
PTPN22-206ENST00000525799 ROBO1Q9Y6N7 1651 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 EEA1Q15075 1411 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 CHD1O14646 1710 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 CUBNO60494 3623 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 COL12A1Q99715 3063 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 ABCA13Q86UQ4 5058 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 RBAKDNA6NC62 111 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 MCRIP1C9JLW8 97 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 APOC4-APOC2K7ER74 178 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 APOC2P02655 101 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 CCL3L1P16619 93 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 PPP3R1P63098 170 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 SELENOWP63302 87 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 RPL7L1Q6DKI1 246 aaKnown RBP0.33□□□□□ -2.36
PTPN22-206ENST00000525799 SLC48A1Q6P1K1 146 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 GTF2H5Q6ZYL4 71 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 LCN9Q8WX39 176 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 FAM103A1Q9BTL3 118 aaKnown RBP0.33□□□□□ -2.36
PTPN22-206ENST00000525799 MANBALQ9NQG1 85 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 CRIPTQ9P021 101 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 MARF1Q9Y4F3 1742 aaKnown RBP0.33□□□□□ -2.36
PTPN22-206ENST00000525799 NBEAL1Q6ZS30 2694 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 TTC37Q6PGP7 1564 aa0.33□□□□□ -2.36
PTPN22-206ENST00000525799 MTORP42345 2549 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 TRGV1A0A0A0MS02 117 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 hADV29S1A0JD25 119 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 GNGT2O14610 69 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 MT-ATP8P03928 68 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 S100PP25815 95 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 GNG11P61952 73 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 BTG2P78543 158 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 LELP1Q5T871 98 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 C4orf33Q8N1A6 199 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 RERGLQ9H628 205 aa0.32□□□□□ -2.36
PTPN22-206ENST00000525799 STAB2Q8WWQ8 2551 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms