RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 TMEM242Q9NWH2 141 aa6.85□□□□□ -1.31
RBBP4-216ENST00000525506 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.84□□□□□ -1.31
RBBP4-216ENST00000525506 IGKV2-29A2NJV5 120 aaPredicted RBP6.84□□□□□ -1.31
RBBP4-216ENST00000525506 SMKR1H3BMG3 65 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 TNFRSF6BO95407 300 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 HLA-DQA1P01909 254 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 FCER1GP30273 86 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 C10orf91Q5T1B1 145 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 COMMD7Q86VX2 200 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 CLRN3Q8NCR9 226 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 TMEM101Q96IK0 257 aa6.84□□□□□ -1.31
RBBP4-216ENST00000525506 D6R8Y8 96 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 USP17L23D6RBM5 183 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 DGAT2L7PQ6IED9 249 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 RNASEKQ6P5S7 137 aaKnown RBP6.83□□□□□ -1.32
RBBP4-216ENST00000525506 Q6ZSA8 131 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 OR5A1Q8NGJ0 315 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 TMEM18Q96B42 140 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 TIMM21Q9BVV7 248 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 SMIM2Q9BVW6 85 aa6.83□□□□□ -1.32
RBBP4-216ENST00000525506 CARHSP1Q9Y2V2 147 aaKnown RBP6.83□□□□□ -1.32
RBBP4-216ENST00000525506 PRSS47A8MTI9 375 aa6.82□□□□□ -1.32
RBBP4-216ENST00000525506 CCL25O15444 150 aa6.82□□□□□ -1.32
RBBP4-216ENST00000525506 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
RBBP4-216ENST00000525506 K7EMI3 77 aa6.81□□□□□ -1.32
RBBP4-216ENST00000525506 NPYP01303 97 aa6.81□□□□□ -1.32
RBBP4-216ENST00000525506 RHEBQ15382 184 aa6.81□□□□□ -1.32
RBBP4-216ENST00000525506 TMEM136Q6ZRR5 245 aa6.81□□□□□ -1.32
RBBP4-216ENST00000525506 CDC42SE2Q9NRR3 84 aa6.81□□□□□ -1.32
RBBP4-216ENST00000525506 UBE2D4Q9Y2X8 147 aa6.81□□□□□ -1.32
RBBP4-216ENST00000525506 CNBPP62633 177 aaKnown RBP6.8□□□□□ -1.32
RBBP4-216ENST00000525506 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
RBBP4-216ENST00000525506 ZNF664Q8N3J9 261 aa6.8□□□□□ -1.32
RBBP4-216ENST00000525506 PRELID3AQ96N28 172 aa6.8□□□□□ -1.32
RBBP4-216ENST00000525506 DMBT1Q9UGM3 2413 aaPredicted RBP6.79□□□□□ -1.32
RBBP4-216ENST00000525506 PRSS1P07477 247 aa6.79□□□□□ -1.32
RBBP4-216ENST00000525506 S100PP25815 95 aa6.79□□□□□ -1.32
RBBP4-216ENST00000525506 COX19Q49B96 90 aa6.79□□□□□ -1.32
RBBP4-216ENST00000525506 SCXQ7RTU7 201 aa6.79□□□□□ -1.32
RBBP4-216ENST00000525506 LINC00528Q8N1L1 170 aa6.79□□□□□ -1.32
RBBP4-216ENST00000525506 CHCHD10Q8WYQ3 142 aaPredicted RBP6.79□□□□□ -1.32
RBBP4-216ENST00000525506 SPANXA1Q9NS26 97 aa6.79□□□□□ -1.32
RBBP4-216ENST00000525506 LINC00959A0A1B0GUT2 108 aa6.78□□□□□ -1.32
RBBP4-216ENST00000525506 RAB5AP20339 215 aa6.78□□□□□ -1.32
RBBP4-216ENST00000525506 MRPS36P82909 103 aaKnown RBP6.78□□□□□ -1.32
RBBP4-216ENST00000525506 SS18Q15532 418 aa6.78□□□□□ -1.32
RBBP4-216ENST00000525506 C9orf163Q8N9P6 203 aa6.78□□□□□ -1.32
RBBP4-216ENST00000525506 MAP1LC3AQ9H492 121 aa6.78□□□□□ -1.32
RBBP4-216ENST00000525506 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 GVQW2A0A096LPI5 108 aaPredicted RBP6.77□□□□□ -1.33
RBBP4-216ENST00000525506 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 C1orf196B1AJZ1 125 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 MT-ND6P03923 174 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 FOXI1Q12951 378 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 CD164L2Q6UWJ8 174 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 GNB1LQ9BYB4 327 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 PYGO1Q9Y3Y4 419 aa6.77□□□□□ -1.33
RBBP4-216ENST00000525506 HERC1Q15751 4861 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.76□□□□□ -1.33
RBBP4-216ENST00000525506 IGKV3OR2-268A0A0C4DH90 116 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 hDV102S1A0JD36 115 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 NPSP0C0P6 89 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 NDUFA5Q16718 116 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 SVBPQ8N300 66 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 Q8N8P6 123 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
RBBP4-216ENST00000525506 NXT2Q9NPJ8 142 aaKnown RBP6.76□□□□□ -1.33
RBBP4-216ENST00000525506 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
RBBP4-216ENST00000525506 G0S2P27469 103 aa6.75□□□□□ -1.33
RBBP4-216ENST00000525506 IFI27P40305 119 aaPredicted RBP6.75□□□□□ -1.33
RBBP4-216ENST00000525506 XCL1P47992 114 aa6.75□□□□□ -1.33
RBBP4-216ENST00000525506 ORMDL2Q53FV1 153 aa6.75□□□□□ -1.33
RBBP4-216ENST00000525506 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
RBBP4-216ENST00000525506 SNAPINO95295 136 aa6.74□□□□□ -1.33
RBBP4-216ENST00000525506 RPL39P62891 51 aaKnown RBP6.74□□□□□ -1.33
RBBP4-216ENST00000525506 Q6ZUT4 128 aa6.74□□□□□ -1.33
RBBP4-216ENST00000525506 RPS10P5Q9NQ39 176 aa6.74□□□□□ -1.33
RBBP4-216ENST00000525506 LINC01549A6NIU2 74 aa6.73□□□□□ -1.33
RBBP4-216ENST00000525506 FAM104AQ969W3 186 aa6.73□□□□□ -1.33
RBBP4-216ENST00000525506 CYSLTR1Q9Y271 337 aa6.73□□□□□ -1.33
RBBP4-216ENST00000525506 PKIGQ9Y2B9 76 aa6.73□□□□□ -1.33
RBBP4-216ENST00000525506 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
RBBP4-216ENST00000525506 PANO1I0J062 215 aa6.72□□□□□ -1.33
RBBP4-216ENST00000525506 COX7A2LO14548 114 aa6.72□□□□□ -1.33
RBBP4-216ENST00000525506 APOC3P02656 99 aa6.72□□□□□ -1.33
RBBP4-216ENST00000525506 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
RBBP4-216ENST00000525506 CIRBPQ14011 172 aaKnown RBP6.72□□□□□ -1.33
RBBP4-216ENST00000525506 SDIM1Q6ZPB5 146 aa6.72□□□□□ -1.33
RBBP4-216ENST00000525506 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.34
RBBP4-216ENST00000525506 LOC389332A0A1B0GUA5 103 aa6.71□□□□□ -1.34
RBBP4-216ENST00000525506 LINC01546A6NGU7 62 aa6.71□□□□□ -1.34
RBBP4-216ENST00000525506 SLPIP03973 132 aa6.71□□□□□ -1.34
RBBP4-216ENST00000525506 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.34
RBBP4-216ENST00000525506 C2orf66Q6UXQ4 117 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms