RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 MRPL54Q6P161 138 aaKnown RBP11.43□□□□□ -0.58
NR1H3-228ENST00000525441 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
NR1H3-228ENST00000525441 TMEM101Q96IK0 257 aa11.43□□□□□ -0.58
NR1H3-228ENST00000525441 TRBV24-1A0A075B6N3 115 aa11.42□□□□□ -0.58
NR1H3-228ENST00000525441 SMKR1H3BMG3 65 aa11.42□□□□□ -0.58
NR1H3-228ENST00000525441 FAM229AH3BQW9 127 aa11.42□□□□□ -0.58
NR1H3-228ENST00000525441 VCYO14598 125 aa11.42□□□□□ -0.58
NR1H3-228ENST00000525441 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
NR1H3-228ENST00000525441 PRSS1P07477 247 aa11.42□□□□□ -0.58
NR1H3-228ENST00000525441 DGAT2L7PQ6IED9 249 aa11.42□□□□□ -0.58
NR1H3-228ENST00000525441 IGKV3OR2-268A0A0C4DH90 116 aa11.41□□□□□ -0.58
NR1H3-228ENST00000525441 ESDP10768 282 aa11.41□□□□□ -0.58
NR1H3-228ENST00000525441 SUMO2P61956 95 aaKnown RBP11.41□□□□□ -0.58
NR1H3-228ENST00000525441 MRPL51Q4U2R6 128 aaKnown RBP11.41□□□□□ -0.58
NR1H3-228ENST00000525441 FCER1GP30273 86 aa11.4□□□□□ -0.58
NR1H3-228ENST00000525441 NRACQ8N912 160 aa11.4□□□□□ -0.58
NR1H3-228ENST00000525441 OR5A1Q8NGJ0 315 aa11.4□□□□□ -0.58
NR1H3-228ENST00000525441 KIR2DL4Q99706 377 aa11.4□□□□□ -0.58
NR1H3-228ENST00000525441 TGIF2-C20orf24A0A0A6YYL0 155 aa11.39□□□□□ -0.59
NR1H3-228ENST00000525441 SCO1O75880 301 aa11.39□□□□□ -0.59
NR1H3-228ENST00000525441 CKS2P33552 79 aa11.39□□□□□ -0.59
NR1H3-228ENST00000525441 SMAGPQ0VAQ4 97 aa11.39□□□□□ -0.59
NR1H3-228ENST00000525441 COX19Q49B96 90 aa11.39□□□□□ -0.59
NR1H3-228ENST00000525441 hDV102S1A0JD36 115 aa11.38□□□□□ -0.59
NR1H3-228ENST00000525441 GAGE12HA6NDE8 117 aa11.38□□□□□ -0.59
NR1H3-228ENST00000525441 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
NR1H3-228ENST00000525441 MRPL52Q86TS9 123 aaKnown RBP11.38□□□□□ -0.59
NR1H3-228ENST00000525441 C20orf78Q9BR46 151 aa11.38□□□□□ -0.59
NR1H3-228ENST00000525441 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
NR1H3-228ENST00000525441 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
NR1H3-228ENST00000525441 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
NR1H3-228ENST00000525441 TCAPO15273 167 aa11.36□□□□□ -0.59
NR1H3-228ENST00000525441 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
NR1H3-228ENST00000525441 C9orf163Q8N9P6 203 aa11.36□□□□□ -0.59
NR1H3-228ENST00000525441 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
NR1H3-228ENST00000525441 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
NR1H3-228ENST00000525441 FAT1Q14517 4588 aa11.36□□□□□ -0.59
NR1H3-228ENST00000525441 PPBPP02775 128 aa11.35□□□□□ -0.59
NR1H3-228ENST00000525441 INAFM2P0DMQ5 153 aa11.35□□□□□ -0.59
NR1H3-228ENST00000525441 CNBPP62633 177 aaKnown RBP11.35□□□□□ -0.59
NR1H3-228ENST00000525441 RPL32P62910 135 aaKnown RBP11.35□□□□□ -0.59
NR1H3-228ENST00000525441 SCXQ7RTU7 201 aa11.35□□□□□ -0.59
NR1H3-228ENST00000525441 TMEM18Q96B42 140 aa11.35□□□□□ -0.59
NR1H3-228ENST00000525441 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
NR1H3-228ENST00000525441 COLCA2A8K830 154 aa11.34□□□□□ -0.59
NR1H3-228ENST00000525441 D6R8Y8 96 aa11.34□□□□□ -0.59
NR1H3-228ENST00000525441 TNFRSF6BO95407 300 aa11.34□□□□□ -0.59
NR1H3-228ENST00000525441 MT-ND6P03923 174 aa11.34□□□□□ -0.59
NR1H3-228ENST00000525441 PHOX2AO14813 284 aa11.33□□□□□ -0.6
NR1H3-228ENST00000525441 SS18Q15532 418 aa11.33□□□□□ -0.6
NR1H3-228ENST00000525441 ZNF664Q8N3J9 261 aa11.33□□□□□ -0.6
NR1H3-228ENST00000525441 CDC42SE2Q9NRR3 84 aa11.33□□□□□ -0.6
NR1H3-228ENST00000525441 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
NR1H3-228ENST00000525441 PLA2G1BP04054 148 aaKnown RBP11.32□□□□□ -0.6
NR1H3-228ENST00000525441 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
NR1H3-228ENST00000525441 SMIM2Q9BVW6 85 aa11.32□□□□□ -0.6
NR1H3-228ENST00000525441 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
NR1H3-228ENST00000525441 XCL1P47992 114 aa11.31□□□□□ -0.6
NR1H3-228ENST00000525441 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
NR1H3-228ENST00000525441 C15orf56Q8N910 161 aa11.31□□□□□ -0.6
NR1H3-228ENST00000525441 CIRBP-AS1Q8TBR5 109 aa11.31□□□□□ -0.6
NR1H3-228ENST00000525441 IGHV3-64A0A075B6Q5 118 aa11.3□□□□□ -0.6
NR1H3-228ENST00000525441 CCL25O15444 150 aa11.3□□□□□ -0.6
NR1H3-228ENST00000525441 NPYP01303 97 aa11.3□□□□□ -0.6
NR1H3-228ENST00000525441 FOXI1Q12951 378 aa11.3□□□□□ -0.6
NR1H3-228ENST00000525441 TIMM21Q9BVV7 248 aa11.3□□□□□ -0.6
NR1H3-228ENST00000525441 UBE2D4Q9Y2X8 147 aa11.3□□□□□ -0.6
NR1H3-228ENST00000525441 RAB5AP20339 215 aa11.29□□□□□ -0.6
NR1H3-228ENST00000525441 MRPL18Q9H0U6 180 aaKnown RBP11.29□□□□□ -0.6
NR1H3-228ENST00000525441 TRAPPC1Q9Y5R8 145 aa11.29□□□□□ -0.6
NR1H3-228ENST00000525441 HIGD2BQ4VC39 106 aa11.28□□□□□ -0.6
NR1H3-228ENST00000525441 CD164L2Q6UWJ8 174 aa11.28□□□□□ -0.6
NR1H3-228ENST00000525441 SDIM1Q6ZPB5 146 aa11.28□□□□□ -0.6
NR1H3-228ENST00000525441 PRELID3AQ96N28 172 aa11.28□□□□□ -0.6
NR1H3-228ENST00000525441 GVQW2A0A096LPI5 108 aaPredicted RBP11.27□□□□□ -0.61
NR1H3-228ENST00000525441 C1orf196B1AJZ1 125 aa11.27□□□□□ -0.61
NR1H3-228ENST00000525441 SLPIP03973 132 aa11.27□□□□□ -0.61
NR1H3-228ENST00000525441 LAMTOR2Q9Y2Q5 125 aa11.27□□□□□ -0.61
NR1H3-228ENST00000525441 VPS13BQ7Z7G8 4022 aa11.26□□□□□ -0.61
NR1H3-228ENST00000525441 IGHV1-58A0A0C4DH39 117 aa11.26□□□□□ -0.61
NR1H3-228ENST00000525441 FABP9Q0Z7S8 132 aa11.26□□□□□ -0.61
NR1H3-228ENST00000525441 SRRM2Q9UQ35 2752 aaKnown RBP11.26□□□□□ -0.61
NR1H3-228ENST00000525441 KIAA1644Q3SXP7 199 aa11.25□□□□□ -0.61
NR1H3-228ENST00000525441 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
NR1H3-228ENST00000525441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.25□□□□□ -0.61
NR1H3-228ENST00000525441 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
NR1H3-228ENST00000525441 Q6ZUT4 128 aa11.24□□□□□ -0.61
NR1H3-228ENST00000525441 FLG2Q5D862 2391 aaPredicted RBP11.23□□□□□ -0.61
NR1H3-228ENST00000525441 TRAV13-1A0A0B4J241 112 aa11.23□□□□□ -0.61
NR1H3-228ENST00000525441 RPL39P62891 51 aaKnown RBP11.23□□□□□ -0.61
NR1H3-228ENST00000525441 DPH3Q96FX2 82 aa11.23□□□□□ -0.61
NR1H3-228ENST00000525441 ALKBH7Q9BT30 221 aaPredicted RBP11.23□□□□□ -0.61
NR1H3-228ENST00000525441 MAP1LC3AQ9H492 121 aa11.23□□□□□ -0.61
NR1H3-228ENST00000525441 PRSS47A8MTI9 375 aa11.22□□□□□ -0.61
NR1H3-228ENST00000525441 COX7A2LO14548 114 aa11.22□□□□□ -0.61
NR1H3-228ENST00000525441 TRGC2P03986 189 aa11.22□□□□□ -0.61
NR1H3-228ENST00000525441 MALP21145 153 aa11.22□□□□□ -0.61
NR1H3-228ENST00000525441 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
NR1H3-228ENST00000525441 ZNF561-AS1K7EIQ3 104 aa11.21□□□□□ -0.61
NR1H3-228ENST00000525441 MRPS36P82909 103 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms