RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 UNQ9165/PRO28630Q6UXU0 137 aa8.29□□□□□ -1.08
CLNS1A-204ENST00000525428 APCP25054 2843 aa8.29□□□□□ -1.08
CLNS1A-204ENST00000525428 KLK9Q9UKQ9 250 aa8.28□□□□□ -1.08
CLNS1A-204ENST00000525428 ACANP16112 2415 aa8.28□□□□□ -1.08
CLNS1A-204ENST00000525428 M0QY20 66 aa8.28□□□□□ -1.08
CLNS1A-204ENST00000525428 LENEPQ9Y5L5 61 aa8.28□□□□□ -1.08
CLNS1A-204ENST00000525428 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
CLNS1A-204ENST00000525428 TRAV12-2A0A075B6T6 113 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 COX7A2LO14548 114 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 CXCL5P42830 114 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 CREBBPQ92793 2442 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 TRBV12-3P01733 135 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 TMEM258P61165 79 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 Q5XG85 94 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 Q8N9W7 124 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 FAM218AQ96MZ4 157 aa8.27□□□□□ -1.09
CLNS1A-204ENST00000525428 HTN1P15515 57 aa8.26□□□□□ -1.09
CLNS1A-204ENST00000525428 LY6G5BQ8NDX9 201 aa8.26□□□□□ -1.09
CLNS1A-204ENST00000525428 FAM110DQ8TAY7 271 aaPredicted RBP8.26□□□□□ -1.09
CLNS1A-204ENST00000525428 C14orf132Q9NPU4 83 aa8.26□□□□□ -1.09
CLNS1A-204ENST00000525428 IGHV3OR16-10A0A075B7F0 116 aa8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 DNAL4O96015 105 aa8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 PYGO1Q9Y3Y4 419 aa8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 SYNJ2BPP57105 145 aa8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 HIST1H4AP62805 103 aaKnown RBP8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 SERP2Q8N6R1 65 aa8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
CLNS1A-204ENST00000525428 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
CLNS1A-204ENST00000525428 MRPS36P82909 103 aaKnown RBP8.24□□□□□ -1.09
CLNS1A-204ENST00000525428 TRBV6-5A0A0K0K1A5 114 aa8.24□□□□□ -1.09
CLNS1A-204ENST00000525428 PROK1P58294 105 aa8.24□□□□□ -1.09
CLNS1A-204ENST00000525428 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
CLNS1A-204ENST00000525428 Q9UF83 564 aa8.24□□□□□ -1.09
CLNS1A-204ENST00000525428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 IGKV2-29A2NJV5 120 aaPredicted RBP8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 C11orf71Q6IPW1 123 aa8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 UNC79Q9P2D8 2635 aa8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 U3KQE9 123 aa8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 C2CD3Q4AC94 2353 aa8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 FAM104AQ969W3 186 aa8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 Q9H8V8 135 aa8.23□□□□□ -1.09
CLNS1A-204ENST00000525428 INAFM2P0DMQ5 153 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 CIRBPQ14011 172 aaKnown RBP8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 Q8N6K4 173 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 FAM223AQ8IWN6 122 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 WFDC9Q8NEX5 89 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 UPK3BQ9BT76 320 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 C1orf43Q9BWL3 253 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 LINC00846Q9NV44 126 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 ODF3BA8MYP8 253 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 KRTAP10-9P60411 292 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 FHL2Q14192 279 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
CLNS1A-204ENST00000525428 KNCNA6PVL3 124 aa8.21□□□□□ -1.09
CLNS1A-204ENST00000525428 SOSTDC1Q6X4U4 206 aa8.21□□□□□ -1.09
CLNS1A-204ENST00000525428 PRIMA1Q86XR5 153 aa8.21□□□□□ -1.09
CLNS1A-204ENST00000525428 PKIGQ9Y2B9 76 aa8.21□□□□□ -1.09
CLNS1A-204ENST00000525428 TEX15Q9BXT5 2789 aa8.21□□□□□ -1.09
CLNS1A-204ENST00000525428 IGHV3-38A0A0C4DH36 116 aa8.21□□□□□ -1.1
CLNS1A-204ENST00000525428 SOCS3O14543 225 aa8.21□□□□□ -1.1
CLNS1A-204ENST00000525428 EDN2P20800 178 aa8.21□□□□□ -1.1
CLNS1A-204ENST00000525428 MALP21145 153 aa8.21□□□□□ -1.1
CLNS1A-204ENST00000525428 BEAN1Q3B7T3 259 aa8.21□□□□□ -1.1
CLNS1A-204ENST00000525428 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
CLNS1A-204ENST00000525428 TINCRA0A1B0GVN0 87 aa8.2□□□□□ -1.1
CLNS1A-204ENST00000525428 HILS1P60008 231 aa8.2□□□□□ -1.1
CLNS1A-204ENST00000525428 MTORP42345 2549 aa8.2□□□□□ -1.1
CLNS1A-204ENST00000525428 MINOS1Q5TGZ0 78 aa8.2□□□□□ -1.1
CLNS1A-204ENST00000525428 FAM223BA6NKX1 122 aa8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 IGHG2P01859 326 aa8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 SETD2Q9BYW2 2564 aaPredicted RBP8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 IGHV3-16A0A0C4DH30 117 aa8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 LINC00336Q6ZUF6 198 aa8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 ZNF469Q96JG9 3925 aaPredicted RBP8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 ITPR3Q14573 2671 aa8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 ABCA2Q9BZC7 2435 aa8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 RHPN1-AS1Q9BWJ2 59 aa8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 BPESC1Q9GZL8 116 aa8.19□□□□□ -1.1
CLNS1A-204ENST00000525428 MYO9AB2RTY4 2548 aa8.18□□□□□ -1.1
CLNS1A-204ENST00000525428 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
CLNS1A-204ENST00000525428 KLLNB2CW77 178 aa8.18□□□□□ -1.1
CLNS1A-204ENST00000525428 PFN2P35080 140 aa8.18□□□□□ -1.1
CLNS1A-204ENST00000525428 PRM2P04554 102 aa8.18□□□□□ -1.1
CLNS1A-204ENST00000525428 FLNAP21333 2647 aaKnown RBP8.17□□□□□ -1.1
CLNS1A-204ENST00000525428 NCR3O14931 201 aa8.17□□□□□ -1.1
CLNS1A-204ENST00000525428 COX6A2Q02221 97 aa8.17□□□□□ -1.1
CLNS1A-204ENST00000525428 SPINK13Q1W4C9 94 aa8.17□□□□□ -1.1
CLNS1A-204ENST00000525428 C20orf197Q8N268 126 aa8.17□□□□□ -1.1
CLNS1A-204ENST00000525428 MAPK1IP1LQ8NDC0 245 aa8.17□□□□□ -1.1
CLNS1A-204ENST00000525428 CCL19Q99731 98 aa8.17□□□□□ -1.1
CLNS1A-204ENST00000525428 A0A087WYN8 130 aa8.16□□□□□ -1.1
CLNS1A-204ENST00000525428 ZFP36P26651 326 aaKnown RBP8.16□□□□□ -1.1
CLNS1A-204ENST00000525428 APRG1Q8IVJ8 170 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms