RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 AQP10Q96PS8 301 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 ACOT13Q9NPJ3 140 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 COPZ2Q9P299 210 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 FLVCR2Q9UPI3 526 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 M0QXV9 152 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 BPY2O14599 106 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 S100A6P06703 90 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 RNASE3P12724 160 aaKnown RBP3.5□□□□□ -1.85
NEDD8-203ENST00000524927 PMCHP20382 165 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 Q6Q795 121 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 IZUMO2Q6UXV1 221 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 FAM19A5Q7Z5A7 132 aaPredicted RBP3.5□□□□□ -1.85
NEDD8-203ENST00000524927 NUP35Q8NFH5 326 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 NAA60Q9H7X0 242 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 TMEM14CQ9P0S9 112 aa3.5□□□□□ -1.85
NEDD8-203ENST00000524927 LSM2Q9Y333 95 aaKnown RBP3.5□□□□□ -1.85
NEDD8-203ENST00000524927 IGHV3OR16-9A0A0B4J2B5 98 aa3.49□□□□□ -1.85
NEDD8-203ENST00000524927 SMCO1Q147U7 214 aa3.49□□□□□ -1.85
NEDD8-203ENST00000524927 C5orf47Q569G3 176 aa3.49□□□□□ -1.85
NEDD8-203ENST00000524927 FAM74A4Q5TZK3 123 aa3.49□□□□□ -1.85
NEDD8-203ENST00000524927 Q5W150 140 aa3.49□□□□□ -1.85
NEDD8-203ENST00000524927 SCGB3A2Q96PL1 93 aa3.49□□□□□ -1.85
NEDD8-203ENST00000524927 BCL7BQ9BQE9 202 aa3.49□□□□□ -1.85
NEDD8-203ENST00000524927 IGHV1-24A0A0C4DH33 117 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 TRBV6-1A0A0K0K1D8 114 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 C19orf71A6NCJ1 209 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 KRBOX1C9JBD0 128 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 S100A9P06702 114 aaKnown RBP3.48□□□□□ -1.85
NEDD8-203ENST00000524927 CSN1S1P47710 185 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 ZFAND1Q8TCF1 268 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 CIB3Q96Q77 187 aaPredicted RBP3.48□□□□□ -1.85
NEDD8-203ENST00000524927 TMEM243Q9BU79 118 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 DERL1Q9BUN8 251 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 MED28Q9H204 178 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 VCX3BQ9H321 246 aa3.48□□□□□ -1.85
NEDD8-203ENST00000524927 SPINK1P00995 79 aa3.47□□□□□ -1.85
NEDD8-203ENST00000524927 MBP02144 154 aa3.47□□□□□ -1.85
NEDD8-203ENST00000524927 IAPPP10997 89 aa3.47□□□□□ -1.85
NEDD8-203ENST00000524927 SLC38A11Q08AI6 406 aa3.47□□□□□ -1.85
NEDD8-203ENST00000524927 ZFP1Q6P2D0 407 aa3.47□□□□□ -1.85
NEDD8-203ENST00000524927 C12orf45Q8N5I9 185 aaPredicted RBP3.47□□□□□ -1.85
NEDD8-203ENST00000524927 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
NEDD8-203ENST00000524927 C7orf66A4D0T2 115 aa3.46□□□□□ -1.86
NEDD8-203ENST00000524927 FNDC10F2Z333 226 aa3.46□□□□□ -1.86
NEDD8-203ENST00000524927 S100A5P33763 92 aa3.46□□□□□ -1.86
NEDD8-203ENST00000524927 CENPXA8MT69 81 aa3.45□□□□□ -1.86
NEDD8-203ENST00000524927 ESDP10768 282 aa3.45□□□□□ -1.86
NEDD8-203ENST00000524927 COX19Q49B96 90 aa3.45□□□□□ -1.86
NEDD8-203ENST00000524927 SFRP2Q96HF1 295 aa3.45□□□□□ -1.86
NEDD8-203ENST00000524927 IGKV3OR2-268A0A0C4DH90 116 aa3.44□□□□□ -1.86
NEDD8-203ENST00000524927 F6UZH7 168 aa3.44□□□□□ -1.86
NEDD8-203ENST00000524927 BCE1O60756 84 aa3.44□□□□□ -1.86
NEDD8-203ENST00000524927 MLLT11Q13015 90 aaPredicted RBP3.44□□□□□ -1.86
NEDD8-203ENST00000524927 SPANXN5Q5MJ07 72 aa3.44□□□□□ -1.86
NEDD8-203ENST00000524927 OR2D3Q8NGH3 330 aa3.44□□□□□ -1.86
NEDD8-203ENST00000524927 PFDN5Q99471 154 aa3.44□□□□□ -1.86
NEDD8-203ENST00000524927 TREM1Q9NP99 234 aa3.44□□□□□ -1.86
NEDD8-203ENST00000524927 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
NEDD8-203ENST00000524927 CHTOPQ9Y3Y2 248 aaKnown RBP3.44□□□□□ -1.86
NEDD8-203ENST00000524927 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
NEDD8-203ENST00000524927 PYYP10082 97 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 S100A4P26447 101 aaKnown RBP3.43□□□□□ -1.86
NEDD8-203ENST00000524927 RAB4BP61018 213 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 RPS29P62273 56 aaKnown RBP3.43□□□□□ -1.86
NEDD8-203ENST00000524927 IFITM3Q01628 133 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 DNAL1Q4LDG9 190 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 C3orf22Q8N5N4 141 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 LINC00469Q8N7U9 141 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 OR5A1Q8NGJ0 315 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 OR5H6Q8NGV6 325 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 DYNC2LI1Q8TCX1 351 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 IMMP2LQ96T52 175 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 IL36BQ9NZH7 164 aa3.43□□□□□ -1.86
NEDD8-203ENST00000524927 A0A1W2PPV4 95 aa3.42□□□□□ -1.86
NEDD8-203ENST00000524927 SLC25A20O43772 301 aa3.42□□□□□ -1.86
NEDD8-203ENST00000524927 NBEAP1P0C6P0 100 aa3.42□□□□□ -1.86
NEDD8-203ENST00000524927 PRSS3P35030 304 aa3.42□□□□□ -1.86
NEDD8-203ENST00000524927 GABARAPL2P60520 117 aa3.42□□□□□ -1.86
NEDD8-203ENST00000524927 RNASE13Q5GAN3 156 aaKnown RBP3.42□□□□□ -1.86
NEDD8-203ENST00000524927 FAM107BQ9H098 131 aa3.42□□□□□ -1.86
NEDD8-203ENST00000524927 OR5AC2Q9NZP5 309 aa3.42□□□□□ -1.86
NEDD8-203ENST00000524927 TRDV1A0A1B0GX56 115 aa3.41□□□□□ -1.86
NEDD8-203ENST00000524927 SYNGR2O43760 224 aa3.41□□□□□ -1.86
NEDD8-203ENST00000524927 STAG3L2P0CL84 134 aa3.41□□□□□ -1.86
NEDD8-203ENST00000524927 SPRR2DP22532 72 aa3.41□□□□□ -1.86
NEDD8-203ENST00000524927 XCL1P47992 114 aa3.41□□□□□ -1.86
NEDD8-203ENST00000524927 C9orf16Q9BUW7 83 aa3.41□□□□□ -1.86
NEDD8-203ENST00000524927 A6NN06 94 aa3.4□□□□□ -1.87
NEDD8-203ENST00000524927 H3BP45 60 aa3.4□□□□□ -1.87
NEDD8-203ENST00000524927 UBE2L6O14933 153 aa3.4□□□□□ -1.87
NEDD8-203ENST00000524927 ZNF80P51504 273 aaPredicted RBP3.4□□□□□ -1.87
NEDD8-203ENST00000524927 RRAS2P62070 204 aaPredicted RBP3.4□□□□□ -1.87
NEDD8-203ENST00000524927 LYZL2Q7Z4W2 148 aa3.4□□□□□ -1.87
NEDD8-203ENST00000524927 S100A16Q96FQ6 103 aaKnown RBP3.4□□□□□ -1.87
NEDD8-203ENST00000524927 MGST2Q99735 147 aa3.4□□□□□ -1.87
NEDD8-203ENST00000524927 LYRM2Q9NU23 88 aaPredicted RBP3.4□□□□□ -1.87
NEDD8-203ENST00000524927 C20orf202A1L168 122 aa3.39□□□□□ -1.87
NEDD8-203ENST00000524927 COLCA2A8K830 154 aa3.39□□□□□ -1.87
NEDD8-203ENST00000524927 RPS20P60866 119 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms