RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 NDUFA1O15239 70 aa13.21□□□□□ -0.3
PCDHB18P-201ENST00000524813 TMEM101Q96IK0 257 aa13.21□□□□□ -0.3
PCDHB18P-201ENST00000524813 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
PCDHB18P-201ENST00000524813 MSMBP08118 114 aa13.2□□□□□ -0.3
PCDHB18P-201ENST00000524813 CHCHD5Q9BSY4 110 aa13.2□□□□□ -0.3
PCDHB18P-201ENST00000524813 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.19□□□□□ -0.3
PCDHB18P-201ENST00000524813 IGHV4-59P01825 116 aa13.18□□□□□ -0.3
PCDHB18P-201ENST00000524813 MEIG1Q5JSS6 88 aa13.18□□□□□ -0.3
PCDHB18P-201ENST00000524813 TRBV7-7A0A0K0K1E9 115 aa13.18□□□□□ -0.3
PCDHB18P-201ENST00000524813 DSCR9P59020 149 aa13.18□□□□□ -0.3
PCDHB18P-201ENST00000524813 CIRBPQ14011 172 aaKnown RBP13.18□□□□□ -0.3
PCDHB18P-201ENST00000524813 LINC00308Q8TCZ7 52 aa13.18□□□□□ -0.3
PCDHB18P-201ENST00000524813 NAV2Q8IVL1 2488 aa13.18□□□□□ -0.3
PCDHB18P-201ENST00000524813 TIRAPP58753 221 aa13.17□□□□□ -0.3
PCDHB18P-201ENST00000524813 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
PCDHB18P-201ENST00000524813 DEFB131AP59861 70 aa13.17□□□□□ -0.3
PCDHB18P-201ENST00000524813 COX6A2Q02221 97 aa13.17□□□□□ -0.3
PCDHB18P-201ENST00000524813 APCP25054 2843 aa13.17□□□□□ -0.3
PCDHB18P-201ENST00000524813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCDHB18P-201ENST00000524813 NACAE9PAV3 2078 aa13.17□□□□□ -0.3
PCDHB18P-201ENST00000524813 IGLV5-45A0A087WSX0 123 aa13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 A0A0U1RRA0 63 aa13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 TMEM89A2RUT3 159 aa13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 RBMY1BA6NDE4 496 aaKnown RBP13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 RBMY1EA6NEQ0 496 aaKnown RBP13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 RBMY1DP0C7P1 496 aaKnown RBP13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 DEFB113Q30KQ7 82 aa13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 SMIM20Q8N5G0 67 aa13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 ZNF625Q96I27 306 aaPredicted RBP13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 Q9H8V8 135 aa13.16□□□□□ -0.3
PCDHB18P-201ENST00000524813 COX7A2LO14548 114 aa13.14□□□□□ -0.31
PCDHB18P-201ENST00000524813 DEFB112Q30KQ8 113 aa13.14□□□□□ -0.31
PCDHB18P-201ENST00000524813 DGAT2L7PQ6IED9 249 aa13.14□□□□□ -0.31
PCDHB18P-201ENST00000524813 CR1P17927 2039 aa13.14□□□□□ -0.31
PCDHB18P-201ENST00000524813 B4DSR2 109 aa13.14□□□□□ -0.31
PCDHB18P-201ENST00000524813 IGHV3-53P01767 116 aa13.14□□□□□ -0.31
PCDHB18P-201ENST00000524813 DNAJC30Q96LL9 226 aa13.14□□□□□ -0.31
PCDHB18P-201ENST00000524813 A0A096LNT2 108 aa13.13□□□□□ -0.31
PCDHB18P-201ENST00000524813 PIK3CD-AS1Q5SR53 167 aa13.13□□□□□ -0.31
PCDHB18P-201ENST00000524813 ACYP1P07311 99 aa13.13□□□□□ -0.31
PCDHB18P-201ENST00000524813 FAM110AQ9BQ89 295 aa13.13□□□□□ -0.31
PCDHB18P-201ENST00000524813 IGHV3OR16-12A0A075B7B8 117 aa13.12□□□□□ -0.31
PCDHB18P-201ENST00000524813 Q8N2B8 174 aa13.12□□□□□ -0.31
PCDHB18P-201ENST00000524813 IGLV5-39A0A0G2JS06 123 aa13.12□□□□□ -0.31
PCDHB18P-201ENST00000524813 SOSTDC1Q6X4U4 206 aa13.12□□□□□ -0.31
PCDHB18P-201ENST00000524813 CSPG4Q6UVK1 2322 aa13.11□□□□□ -0.31
PCDHB18P-201ENST00000524813 GCN1Q92616 2671 aaKnown RBP13.11□□□□□ -0.31
PCDHB18P-201ENST00000524813 LINC00242Q5T6M2 205 aa13.11□□□□□ -0.31
PCDHB18P-201ENST00000524813 A8MTW9 85 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 HERVK_113P63121 156 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 SHISA2Q6UWI4 295 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 LINC01587Q99440 93 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 FAM236AA0A1B0GUQ0 79 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 FAM236BA0A1B0GV22 79 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 C3orf56Q8N813 242 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 LINC01356Q8N9X3 169 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 C11orf72Q8NBR9 251 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 SMCR5Q8TEV8 140 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 Q96MF0 132 aa13.1□□□□□ -0.31
PCDHB18P-201ENST00000524813 HERV-K104P63124 156 aa13.09□□□□□ -0.31
PCDHB18P-201ENST00000524813 SLURP1P55000 103 aa13.08□□□□□ -0.32
PCDHB18P-201ENST00000524813 DAZ2Q13117 558 aaKnown RBP13.08□□□□□ -0.32
PCDHB18P-201ENST00000524813 DAZ4Q86SG3 579 aaKnown RBP13.08□□□□□ -0.32
PCDHB18P-201ENST00000524813 IMUPQ9GZP8 106 aa13.08□□□□□ -0.32
PCDHB18P-201ENST00000524813 DAZ3Q9NR90 486 aaKnown RBP13.08□□□□□ -0.32
PCDHB18P-201ENST00000524813 SMIM1B2RUZ4 78 aa13.08□□□□□ -0.32
PCDHB18P-201ENST00000524813 RS1O15537 224 aa13.08□□□□□ -0.32
PCDHB18P-201ENST00000524813 NDUFA7O95182 113 aa13.08□□□□□ -0.32
PCDHB18P-201ENST00000524813 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
PCDHB18P-201ENST00000524813 LRRC75A-AS1Q8N1F1 130 aa13.07□□□□□ -0.32
PCDHB18P-201ENST00000524813 COPS9Q8WXC6 57 aa13.07□□□□□ -0.32
PCDHB18P-201ENST00000524813 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
PCDHB18P-201ENST00000524813 LINC00694P0DN24 101 aa13.07□□□□□ -0.32
PCDHB18P-201ENST00000524813 DEFB136Q30KP8 78 aa13.07□□□□□ -0.32
PCDHB18P-201ENST00000524813 BAALC-AS2P0C853 105 aa13.06□□□□□ -0.32
PCDHB18P-201ENST00000524813 PRIMA1Q86XR5 153 aa13.06□□□□□ -0.32
PCDHB18P-201ENST00000524813 KRTAP1-3Q8IUG1 177 aa13.06□□□□□ -0.32
PCDHB18P-201ENST00000524813 TRAV13-1A0A0B4J241 112 aa13.06□□□□□ -0.32
PCDHB18P-201ENST00000524813 TRACP01848 142 aa13.06□□□□□ -0.32
PCDHB18P-201ENST00000524813 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
PCDHB18P-201ENST00000524813 LINC00643Q86TS7 51 aa13.06□□□□□ -0.32
PCDHB18P-201ENST00000524813 CREBBPQ92793 2442 aa13.05□□□□□ -0.32
PCDHB18P-201ENST00000524813 IGHV4-31P0DP07 118 aa13.05□□□□□ -0.32
PCDHB18P-201ENST00000524813 ZNF469Q96JG9 3925 aaPredicted RBP13.04□□□□□ -0.32
PCDHB18P-201ENST00000524813 CCDC168Q8NDH2 2452 aa13.04□□□□□ -0.32
PCDHB18P-201ENST00000524813 FAM218AQ96MZ4 157 aa13.04□□□□□ -0.32
PCDHB18P-201ENST00000524813 FAM19A3Q7Z5A8 133 aa13.03□□□□□ -0.32
PCDHB18P-201ENST00000524813 TMEM126AQ9H061 195 aa13.03□□□□□ -0.32
PCDHB18P-201ENST00000524813 C22orf24Q9Y442 160 aa13.03□□□□□ -0.32
PCDHB18P-201ENST00000524813 WFDC11Q8NEX6 87 aa13.03□□□□□ -0.32
PCDHB18P-201ENST00000524813 MAP6D1Q9H9H5 199 aa13.02□□□□□ -0.32
PCDHB18P-201ENST00000524813 ITPR3Q14573 2671 aa13.02□□□□□ -0.33
PCDHB18P-201ENST00000524813 INSP01308 110 aa13.02□□□□□ -0.33
PCDHB18P-201ENST00000524813 ZNF702PQ9H963 129 aa13.02□□□□□ -0.33
PCDHB18P-201ENST00000524813 MXRA5Q9NR99 2828 aa13.01□□□□□ -0.33
PCDHB18P-201ENST00000524813 F5H768 121 aa13□□□□□ -0.33
PCDHB18P-201ENST00000524813 SDIM1Q6ZPB5 146 aa13□□□□□ -0.33
PCDHB18P-201ENST00000524813 ITPR2Q14571 2701 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms