RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 DNAH11Q96DT5 4516 aa8.27□□□□□ -1.09
CCNC-216ENST00000523961 IGLV10-54A0A075B6I4 117 aa8.26□□□□□ -1.09
CCNC-216ENST00000523961 IGLV5-52A0A0A0MRZ9 124 aa8.26□□□□□ -1.09
CCNC-216ENST00000523961 HLA-DQA1P01909 254 aa8.26□□□□□ -1.09
CCNC-216ENST00000523961 APOC3P02656 99 aa8.26□□□□□ -1.09
CCNC-216ENST00000523961 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
CCNC-216ENST00000523961 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
CCNC-216ENST00000523961 TMEM18Q96B42 140 aa8.26□□□□□ -1.09
CCNC-216ENST00000523961 PRSS47A8MTI9 375 aa8.25□□□□□ -1.09
CCNC-216ENST00000523961 SNAPINO95295 136 aa8.25□□□□□ -1.09
CCNC-216ENST00000523961 DGAT2L7PQ6IED9 249 aa8.25□□□□□ -1.09
CCNC-216ENST00000523961 SVBPQ8N300 66 aa8.25□□□□□ -1.09
CCNC-216ENST00000523961 MAP1LC3AQ9H492 121 aa8.25□□□□□ -1.09
CCNC-216ENST00000523961 DYNC1H1Q14204 4646 aaKnown RBP8.24□□□□□ -1.09
CCNC-216ENST00000523961 IGKV3OR2-268A0A0C4DH90 116 aa8.24□□□□□ -1.09
CCNC-216ENST00000523961 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
CCNC-216ENST00000523961 RAB5AP20339 215 aa8.24□□□□□ -1.09
CCNC-216ENST00000523961 GCSHP23434 173 aa8.24□□□□□ -1.09
CCNC-216ENST00000523961 COX19Q49B96 90 aa8.24□□□□□ -1.09
CCNC-216ENST00000523961 CSDC2Q9Y534 153 aaKnown RBP8.24□□□□□ -1.09
CCNC-216ENST00000523961 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.23□□□□□ -1.09
CCNC-216ENST00000523961 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
CCNC-216ENST00000523961 ZNF664Q8N3J9 261 aa8.23□□□□□ -1.09
CCNC-216ENST00000523961 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
CCNC-216ENST00000523961 GNB1LQ9BYB4 327 aa8.23□□□□□ -1.09
CCNC-216ENST00000523961 CDC42SE2Q9NRR3 84 aa8.23□□□□□ -1.09
CCNC-216ENST00000523961 UBE2D4Q9Y2X8 147 aa8.23□□□□□ -1.09
CCNC-216ENST00000523961 LOC389332A0A1B0GUA5 103 aa8.22□□□□□ -1.09
CCNC-216ENST00000523961 GAGE12HA6NDE8 117 aa8.21□□□□□ -1.1
CCNC-216ENST00000523961 MT-ND6P03923 174 aa8.21□□□□□ -1.1
CCNC-216ENST00000523961 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
CCNC-216ENST00000523961 KIAA1644Q3SXP7 199 aa8.21□□□□□ -1.1
CCNC-216ENST00000523961 Q8N8P6 123 aa8.21□□□□□ -1.1
CCNC-216ENST00000523961 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.1
CCNC-216ENST00000523961 LINC00959A0A1B0GUT2 108 aa8.2□□□□□ -1.1
CCNC-216ENST00000523961 RPL39P62891 51 aaKnown RBP8.2□□□□□ -1.1
CCNC-216ENST00000523961 SS18Q15532 418 aa8.2□□□□□ -1.1
CCNC-216ENST00000523961 NXT2Q9NPJ8 142 aaKnown RBP8.2□□□□□ -1.1
CCNC-216ENST00000523961 SPANXA1Q9NS26 97 aa8.2□□□□□ -1.1
CCNC-216ENST00000523961 K7EMI3 77 aa8.19□□□□□ -1.1
CCNC-216ENST00000523961 PRSS1P07477 247 aa8.19□□□□□ -1.1
CCNC-216ENST00000523961 CFAP161Q6P656 301 aa8.19□□□□□ -1.1
CCNC-216ENST00000523961 CCL25O15444 150 aa8.18□□□□□ -1.1
CCNC-216ENST00000523961 ORMDL2Q53FV1 153 aa8.18□□□□□ -1.1
CCNC-216ENST00000523961 Q6ZUT4 128 aa8.18□□□□□ -1.1
CCNC-216ENST00000523961 MRPL18Q9H0U6 180 aaKnown RBP8.18□□□□□ -1.1
CCNC-216ENST00000523961 KIAA1109Q2LD37 5005 aa8.18□□□□□ -1.1
CCNC-216ENST00000523961 TGIF2-C20orf24A0A0A6YYL0 155 aa8.17□□□□□ -1.1
CCNC-216ENST00000523961 LOC100996750A0A140TA64 210 aa8.17□□□□□ -1.1
CCNC-216ENST00000523961 C1orf196B1AJZ1 125 aa8.17□□□□□ -1.1
CCNC-216ENST00000523961 IFI27P40305 119 aaPredicted RBP8.17□□□□□ -1.1
CCNC-216ENST00000523961 XCL1P47992 114 aa8.17□□□□□ -1.1
CCNC-216ENST00000523961 MRPS36P82909 103 aaKnown RBP8.17□□□□□ -1.1
CCNC-216ENST00000523961 FABP9Q0Z7S8 132 aa8.17□□□□□ -1.1
CCNC-216ENST00000523961 RNASE13Q5GAN3 156 aaKnown RBP8.17□□□□□ -1.1
CCNC-216ENST00000523961 SLC7A5P1Q8MH63 180 aa8.17□□□□□ -1.1
CCNC-216ENST00000523961 KRTAP4-6Q9BYQ5 205 aa8.17□□□□□ -1.1
CCNC-216ENST00000523961 LRP1BQ9NZR2 4599 aa8.17□□□□□ -1.1
CCNC-216ENST00000523961 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
CCNC-216ENST00000523961 hDV102S1A0JD36 115 aa8.16□□□□□ -1.1
CCNC-216ENST00000523961 G0S2P27469 103 aa8.16□□□□□ -1.1
CCNC-216ENST00000523961 FOXI1Q12951 378 aa8.16□□□□□ -1.1
CCNC-216ENST00000523961 CD164L2Q6UWJ8 174 aa8.16□□□□□ -1.1
CCNC-216ENST00000523961 ALKBH7Q9BT30 221 aaPredicted RBP8.16□□□□□ -1.1
CCNC-216ENST00000523961 AP5S1Q9NUS5 200 aa8.16□□□□□ -1.1
CCNC-216ENST00000523961 CYSLTR1Q9Y271 337 aa8.16□□□□□ -1.1
CCNC-216ENST00000523961 PYGO1Q9Y3Y4 419 aa8.16□□□□□ -1.1
CCNC-216ENST00000523961 C2orf66Q6UXQ4 117 aa8.15□□□□□ -1.1
CCNC-216ENST00000523961 C15orf56Q8N910 161 aa8.15□□□□□ -1.1
CCNC-216ENST00000523961 PRSS3P2Q8NHM4 247 aa8.15□□□□□ -1.1
CCNC-216ENST00000523961 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
CCNC-216ENST00000523961 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
CCNC-216ENST00000523961 XGP55808 180 aa8.14□□□□□ -1.11
CCNC-216ENST00000523961 LINC01620Q4KN68 170 aa8.14□□□□□ -1.11
CCNC-216ENST00000523961 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
CCNC-216ENST00000523961 OPRPNQ99935 248 aaPredicted RBP8.14□□□□□ -1.11
CCNC-216ENST00000523961 IGHV1-58A0A0C4DH39 117 aa8.13□□□□□ -1.11
CCNC-216ENST00000523961 CNBPP62633 177 aaKnown RBP8.13□□□□□ -1.11
CCNC-216ENST00000523961 C9orf163Q8N9P6 203 aa8.13□□□□□ -1.11
CCNC-216ENST00000523961 TMEM141Q96I45 108 aa8.13□□□□□ -1.11
CCNC-216ENST00000523961 SMCO4Q9NRQ5 59 aa8.13□□□□□ -1.11
CCNC-216ENST00000523961 HERC2O95714 4834 aa8.13□□□□□ -1.11
CCNC-216ENST00000523961 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
CCNC-216ENST00000523961 GVQW2A0A096LPI5 108 aaPredicted RBP8.12□□□□□ -1.11
CCNC-216ENST00000523961 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.12□□□□□ -1.11
CCNC-216ENST00000523961 IFITM10A6NMD0 228 aa8.12□□□□□ -1.11
CCNC-216ENST00000523961 COX7A2LO14548 114 aa8.12□□□□□ -1.11
CCNC-216ENST00000523961 NPSP0C0P6 89 aa8.12□□□□□ -1.11
CCNC-216ENST00000523961 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
CCNC-216ENST00000523961 Q6ZSA8 131 aa8.12□□□□□ -1.11
CCNC-216ENST00000523961 YPEL4Q96NS1 127 aa8.12□□□□□ -1.11
CCNC-216ENST00000523961 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
CCNC-216ENST00000523961 LINC01546A6NGU7 62 aa8.11□□□□□ -1.11
CCNC-216ENST00000523961 MALP21145 153 aa8.11□□□□□ -1.11
CCNC-216ENST00000523961 Q6ZN92 141 aa8.11□□□□□ -1.11
CCNC-216ENST00000523961 TEX43Q6ZNM6 134 aa8.11□□□□□ -1.11
CCNC-216ENST00000523961 FA2HQ7L5A8 372 aa8.11□□□□□ -1.11
CCNC-216ENST00000523961 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
CCNC-216ENST00000523961 IGIPA6NJ69 53 aa8.1□□□□□ -1.11
CCNC-216ENST00000523961 SLPIP03973 132 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms