RNA–Protein interactions for RNA: ENST00000523953.5

CA1-222, Transcript of carbonic anhydrase 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene CA1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-222	ENST00000523953	PPDPFL	Q8WWR9	84 aa		4.92	□□□□□ -1.62
CA1-222	ENST00000523953	RPL36AL	Q969Q0	106 aa	Known RBP	4.92	□□□□□ -1.62
CA1-222	ENST00000523953	OVOL2	Q9BRP0	275 aa		4.92	□□□□□ -1.62
CA1-222	ENST00000523953	GEMIN7	Q9H840	131 aa	Known RBP	4.92	□□□□□ -1.62
CA1-222	ENST00000523953	XCL2	Q9UBD3	114 aa		4.92	□□□□□ -1.62
CA1-222	ENST00000523953	CSPG4	Q6UVK1	2322 aa		4.92	□□□□□ -1.62
CA1-222	ENST00000523953	COL12A1	Q99715	3063 aa		4.92	□□□□□ -1.62
CA1-222	ENST00000523953	LINC01006	Q8NI28	216 aa		4.92	□□□□□ -1.62
CA1-222	ENST00000523953	SIGMAR1	Q99720	223 aa		4.92	□□□□□ -1.62
CA1-222	ENST00000523953	C19orf73	Q9NVV2	129 aa		4.92	□□□□□ -1.62
CA1-222	ENST00000523953	GIG44	P09565	113 aa	Predicted RBP	4.91	□□□□□ -1.62
CA1-222	ENST00000523953	CELSR2	Q9HCU4	2923 aa		4.91	□□□□□ -1.62
CA1-222	ENST00000523953	SPG11	Q96JI7	2443 aa		4.91	□□□□□ -1.62
CA1-222	ENST00000523953	IGHV3-64	A0A075B6Q5	118 aa		4.91	□□□□□ -1.62
CA1-222	ENST00000523953	IGHV3OR16-12	A0A075B7B8	117 aa		4.91	□□□□□ -1.62
CA1-222	ENST00000523953	TRGV1	A0A0A0MS02	117 aa		4.91	□□□□□ -1.62
CA1-222	ENST00000523953	TRAV8-3	A0A0A6YYJ7	113 aa		4.91	□□□□□ -1.62
CA1-222	ENST00000523953	PLAC8L1	A1L4L8	177 aa		4.91	□□□□□ -1.62
CA1-222	ENST00000523953	COPS9	Q8WXC6	57 aa		4.91	□□□□□ -1.62
CA1-222	ENST00000523953	TRBV6-4	A0A1B0GX49	114 aa		4.9	□□□□□ -1.62
CA1-222	ENST00000523953	ATXN8	Q156A1	80 aa		4.9	□□□□□ -1.62
CA1-222	ENST00000523953	LINC00242	Q5T6M2	205 aa		4.9	□□□□□ -1.62
CA1-222	ENST00000523953	CDKN2A-AS1	Q9UH64	79 aa		4.9	□□□□□ -1.62
CA1-222	ENST00000523953	IGHV3-38	A0A0C4DH36	116 aa		4.9	□□□□□ -1.63
CA1-222	ENST00000523953	SPINK8	P0C7L1	97 aa		4.9	□□□□□ -1.63
CA1-222	ENST00000523953	DGAT2L7P	Q6IED9	249 aa		4.9	□□□□□ -1.63
CA1-222	ENST00000523953	CSNK1G2-AS1	Q8NCQ2	148 aa		4.9	□□□□□ -1.63
CA1-222	ENST00000523953	TMEM101	Q96IK0	257 aa		4.9	□□□□□ -1.63
CA1-222	ENST00000523953	ZNF462	Q96JM2	2506 aa		4.9	□□□□□ -1.63
CA1-222	ENST00000523953	UTP20	O75691	2785 aa	Known RBP	4.89	□□□□□ -1.63
CA1-222	ENST00000523953	SCGB1C2	P0DMR2	95 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	LINC00694	P0DN24	101 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	HILS1	P60008	231 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	ADAMTSL4-AS1	Q5T5F5	129 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	NTM-AS1	Q6ZSK4	140 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953		Q6ZTI0	123 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	CDC42SE2	Q9NRR3	84 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	MYO18B	Q8IUG5	2567 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	ACACB	O00763	2458 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	HERV-K104	P63124	156 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	CIRBP	Q14011	172 aa	Known RBP	4.89	□□□□□ -1.63
CA1-222	ENST00000523953	RNASE13	Q5GAN3	156 aa	Known RBP	4.89	□□□□□ -1.63
CA1-222	ENST00000523953	CARD19	Q96LW7	228 aa		4.89	□□□□□ -1.63
CA1-222	ENST00000523953	SMIM1	B2RUZ4	78 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	MTURN	Q8N3F0	131 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.88	□□□□□ -1.63
CA1-222	ENST00000523953		A0A1W2PRX2	142 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953		F5H768	121 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	SLC25A20	O43772	301 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	RPL13A	P40429	203 aa	Known RBP	4.88	□□□□□ -1.63
CA1-222	ENST00000523953	INSL3	P51460	131 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	LINC01620	Q4KN68	170 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	LINC00612	Q8N6U2	182 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	ZNF418	Q8TF45	676 aa	Predicted RBP	4.88	□□□□□ -1.63
CA1-222	ENST00000523953	TMEM243	Q9BU79	118 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	ICOS	Q9Y6W8	199 aa		4.88	□□□□□ -1.63
CA1-222	ENST00000523953	TRBV10-2	A0A0K0K1G8	114 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	TRIAP1	O43715	76 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	COX6A2	Q02221	97 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	ZNF625	Q96I27	306 aa	Predicted RBP	4.87	□□□□□ -1.63
CA1-222	ENST00000523953	CDIP1	Q9H305	208 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	AKAP9	Q99996	3911 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	MXRA5	Q9NR99	2828 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	USP9Y	O00507	2555 aa	Predicted RBP	4.87	□□□□□ -1.63
CA1-222	ENST00000523953	TMEM262	E9PQX1	116 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953		H3BT86	120 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	COX6C	P09669	75 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	ANKRD29	Q8N6D5	301 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	NOP10	Q9NPE3	64 aa	Known RBP	4.87	□□□□□ -1.63
CA1-222	ENST00000523953	NAV2	Q8IVL1	2488 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	SFTA2	Q6UW10	78 aa		4.87	□□□□□ -1.63
CA1-222	ENST00000523953	PRSS2	P07478	247 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953		Q1RN00	199 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	KIR2DL5B	Q8NHK3	375 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	LINC00308	Q8TCZ7	52 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	CREBBP	Q92793	2442 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	GAGE12J	A6NER3	117 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953		A8MZ25	164 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953		C9JAW5	83 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953		F8WDY8	70 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	LST1	O00453	97 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	GAGE4	Q13068	117 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	GAGE5	Q13069	117 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	HIST2H2BD	Q6DRA6	164 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	C11orf44	Q8N8P7	122 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953		Q9H8V8	135 aa		4.86	□□□□□ -1.63
CA1-222	ENST00000523953	ZAN	Q9Y493	2812 aa		4.85	□□□□□ -1.63
CA1-222	ENST00000523953	UBE2L6	O14933	153 aa		4.85	□□□□□ -1.63
CA1-222	ENST00000523953	PLA2G2A	P14555	144 aa		4.85	□□□□□ -1.63
CA1-222	ENST00000523953	FHL2	Q14192	279 aa		4.85	□□□□□ -1.63
CA1-222	ENST00000523953	PTPN13	Q12923	2485 aa		4.85	□□□□□ -1.63
CA1-222	ENST00000523953	DEFB121	Q5J5C9	76 aa		4.85	□□□□□ -1.63
CA1-222	ENST00000523953	FAM222A	Q5U5X8	452 aa		4.85	□□□□□ -1.63
CA1-222	ENST00000523953	LRRK2	Q5S007	2527 aa		4.85	□□□□□ -1.63
CA1-222	ENST00000523953	ANK3	Q12955	4377 aa	Known RBP	4.84	□□□□□ -1.63
CA1-222	ENST00000523953	TRGV2	A0A075B6R0	118 aa		4.84	□□□□□ -1.63
CA1-222	ENST00000523953	SMIM9	A6NGZ8	99 aa		4.84	□□□□□ -1.63
CA1-222	ENST00000523953		J3QKU1	62 aa		4.84	□□□□□ -1.63
CA1-222	ENST00000523953	CSMD2	Q7Z408	3487 aa		4.84	□□□□□ -1.63
CA1-222	ENST00000523953	TRBV6-8	A0A0A6YYG3	113 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms