RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 RABAC1Q9UI14 185 aa0.79□□□□□ -2.28
PCM1-220ENST00000523896 KPNA4O00629 521 aaPredicted RBP0.78□□□□□ -2.28
PCM1-220ENST00000523896 RER1O15258 196 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 CYB5BO43169 146 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 IGHV3-30P01768 117 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 IGHV3-33P01772 117 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 PRH1P02810 166 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 IGHV3-30-5P0DP03 117 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 RHOBP62745 196 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 FXYD3Q14802 87 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 RTL8BQ17RB0 113 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 LYPD5Q6UWN5 251 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 RPS27LQ71UM5 84 aaKnown RBP0.78□□□□□ -2.28
PCM1-220ENST00000523896 RERGLQ9H628 205 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 BCL2L10Q9HD36 194 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 C14orf132Q9NPU4 83 aa0.78□□□□□ -2.28
PCM1-220ENST00000523896 LOC107986453A0A1B0GWG9 222 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 TMEM14DPA8MWL7 114 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 IFNA7P01567 189 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 MT-ND6P03923 174 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 CTXN2P0C2S0 81 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 PHBP35232 272 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 SERPINB9P50453 376 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 TAS2R41P59536 307 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 DEFA3P59666 94 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 EIF5AP63241 154 aaKnown RBP0.77□□□□□ -2.29
PCM1-220ENST00000523896 SNCBQ16143 134 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 SPINK9Q5DT21 86 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 GLYATL3Q5SZD4 288 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 LYRM7Q5U5X0 104 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 SOSTDC1Q6X4U4 206 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 FAM24BQ8N5W8 94 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 GNPDA2Q8TDQ7 276 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 SPTSSAQ969W0 71 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 BTF3L4Q96K17 158 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 NMNAT1Q9HAN9 279 aaPredicted RBP0.77□□□□□ -2.29
PCM1-220ENST00000523896 CACYBPQ9HB71 228 aaKnown RBP0.77□□□□□ -2.29
PCM1-220ENST00000523896 METTL1Q9UBP6 276 aaKnown RBP0.77□□□□□ -2.29
PCM1-220ENST00000523896 ATPIF1Q9UII2 106 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 UBE2D4Q9Y2X8 147 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 MPC1Q9Y5U8 109 aa0.77□□□□□ -2.29
PCM1-220ENST00000523896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.76□□□□□ -2.29
PCM1-220ENST00000523896 TRAV4A0A0B4J268 109 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 ODAMA1E959 279 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 M0R135 149 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 E2F6O75461 281 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 NDUFA3O95167 84 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 GYPBP06028 91 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 DBIP07108 87 aaKnown RBP0.76□□□□□ -2.29
PCM1-220ENST00000523896 HTN1P15515 57 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 ERP29P30040 261 aaKnown RBP0.76□□□□□ -2.29
PCM1-220ENST00000523896 RNASE4P34096 147 aaKnown RBP0.76□□□□□ -2.29
PCM1-220ENST00000523896 GNG3P63215 75 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 BASP1P80723 227 aaKnown RBP0.76□□□□□ -2.29
PCM1-220ENST00000523896 RBM3P98179 157 aaKnown RBP0.76□□□□□ -2.29
PCM1-220ENST00000523896 FADDQ13158 208 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 TEX261Q6UWH6 196 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 KRTAP8-1Q8IUC2 63 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 VSTM2AQ8TAG5 236 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 SLAMF6Q96DU3 332 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 RHPN1-AS1Q9BWJ2 59 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 NOP10Q9NPE3 64 aaKnown RBP0.76□□□□□ -2.29
PCM1-220ENST00000523896 CDC42SE1Q9NRR8 79 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 TIMM8BQ9Y5J9 83 aaPredicted RBP0.76□□□□□ -2.29
PCM1-220ENST00000523896 U3KQ87 197 aa0.76□□□□□ -2.29
PCM1-220ENST00000523896 CCDC160A6NGH7 325 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 H7C1C5 153 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 DHFRP00374 187 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 S100A6P06703 90 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 PIGPP57054 158 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 NCALDP61601 193 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 LCN6P62502 163 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 MRPS15P82914 257 aaKnown RBP0.75□□□□□ -2.29
PCM1-220ENST00000523896 RPL19P84098 196 aaKnown RBP0.75□□□□□ -2.29
PCM1-220ENST00000523896 MPV17LQ2QL34 196 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 LIN52Q52LA3 116 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 LINC01556Q5JQF7 62 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 PSMG4Q5JS54 123 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 Q8IYB0 196 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 CLECL1Q8IZS7 167 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 STAG3L4Q8TBR4 150 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 PRADC1Q9BSG0 188 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 SMPXQ9UHP9 88 aa0.75□□□□□ -2.29
PCM1-220ENST00000523896 TRBV19A0A075B6N1 114 aa0.74□□□□□ -2.29
PCM1-220ENST00000523896 TRBV7-1A0A0A6YYK4 115 aa0.74□□□□□ -2.29
PCM1-220ENST00000523896 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.74□□□□□ -2.29
PCM1-220ENST00000523896 A0A1B0GWA3 101 aa0.74□□□□□ -2.29
PCM1-220ENST00000523896 GADD45GO95257 159 aa0.74□□□□□ -2.29
PCM1-220ENST00000523896 ZNF25P17030 456 aaPredicted RBP0.74□□□□□ -2.29
PCM1-220ENST00000523896 KRR1Q13601 381 aaKnown RBP0.74□□□□□ -2.29
PCM1-220ENST00000523896 TMEM126AQ9H061 195 aa0.74□□□□□ -2.29
PCM1-220ENST00000523896 TRAV2A0A0B4J234 112 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 FAM159BA6NKW6 160 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 NDUFA4O00483 81 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 SNRPD3P62318 126 aaKnown RBP0.73□□□□□ -2.29
PCM1-220ENST00000523896 OR5A2Q8NGI9 324 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 TMEM167AQ8TBQ9 72 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 TSKUQ8WUA8 353 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 CEP19Q96LK0 163 aa0.73□□□□□ -2.29
PCM1-220ENST00000523896 YPEL2Q96QA6 119 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms