RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 RPL32P62910 135 aaKnown RBP11.15□□□□□ -0.62
CCNC-213ENST00000523541 PNRC1Q12796 327 aaPredicted RBP11.15□□□□□ -0.62
CCNC-213ENST00000523541 NRACQ8N912 160 aa11.15□□□□□ -0.62
CCNC-213ENST00000523541 TMEM242Q9NWH2 141 aa11.15□□□□□ -0.62
CCNC-213ENST00000523541 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.62
CCNC-213ENST00000523541 GAGE12HA6NDE8 117 aa11.14□□□□□ -0.63
CCNC-213ENST00000523541 CCL25O15444 150 aa11.14□□□□□ -0.63
CCNC-213ENST00000523541 FCER1GP30273 86 aa11.14□□□□□ -0.63
CCNC-213ENST00000523541 CAMPP49913 170 aa11.14□□□□□ -0.63
CCNC-213ENST00000523541 MRPL51Q4U2R6 128 aaKnown RBP11.14□□□□□ -0.63
CCNC-213ENST00000523541 CIRBP-AS1Q8TBR5 109 aa11.14□□□□□ -0.63
CCNC-213ENST00000523541 CHCHD10Q8WYQ3 142 aaPredicted RBP11.14□□□□□ -0.63
CCNC-213ENST00000523541 CDC42SE2Q9NRR3 84 aa11.14□□□□□ -0.63
CCNC-213ENST00000523541 PPBPP02775 128 aa11.13□□□□□ -0.63
CCNC-213ENST00000523541 CKS2P33552 79 aa11.13□□□□□ -0.63
CCNC-213ENST00000523541 HBBP68871 147 aa11.13□□□□□ -0.63
CCNC-213ENST00000523541 SDIM1Q6ZPB5 146 aa11.13□□□□□ -0.63
CCNC-213ENST00000523541 ATP5L2Q7Z4Y8 100 aa11.13□□□□□ -0.63
CCNC-213ENST00000523541 TMEM18Q96B42 140 aa11.13□□□□□ -0.63
CCNC-213ENST00000523541 J3QL48 77 aa11.12□□□□□ -0.63
CCNC-213ENST00000523541 PHOX2AO14813 284 aa11.12□□□□□ -0.63
CCNC-213ENST00000523541 ZNF664Q8N3J9 261 aa11.12□□□□□ -0.63
CCNC-213ENST00000523541 IGHV3-64A0A075B6Q5 118 aa11.11□□□□□ -0.63
CCNC-213ENST00000523541 LINC00959A0A1B0GUT2 108 aa11.11□□□□□ -0.63
CCNC-213ENST00000523541 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
CCNC-213ENST00000523541 SMKR1H3BMG3 65 aa11.11□□□□□ -0.63
CCNC-213ENST00000523541 SS18Q15532 418 aa11.11□□□□□ -0.63
CCNC-213ENST00000523541 ANAPC16Q96DE5 110 aa11.11□□□□□ -0.63
CCNC-213ENST00000523541 DPH3Q96FX2 82 aa11.1□□□□□ -0.63
CCNC-213ENST00000523541 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
CCNC-213ENST00000523541 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
CCNC-213ENST00000523541 MYCBP2O75592 4640 aa11.09□□□□□ -0.63
CCNC-213ENST00000523541 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
CCNC-213ENST00000523541 FOXI1Q12951 378 aa11.09□□□□□ -0.63
CCNC-213ENST00000523541 CLLU1Q5K131 121 aa11.09□□□□□ -0.63
CCNC-213ENST00000523541 C15orf56Q8N910 161 aa11.09□□□□□ -0.63
CCNC-213ENST00000523541 FLG2Q5D862 2391 aaPredicted RBP11.09□□□□□ -0.63
CCNC-213ENST00000523541 GVQW2A0A096LPI5 108 aaPredicted RBP11.08□□□□□ -0.64
CCNC-213ENST00000523541 C1orf196B1AJZ1 125 aa11.08□□□□□ -0.64
CCNC-213ENST00000523541 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
CCNC-213ENST00000523541 SLPIP03973 132 aa11.08□□□□□ -0.64
CCNC-213ENST00000523541 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
CCNC-213ENST00000523541 MRPL54Q6P161 138 aaKnown RBP11.08□□□□□ -0.64
CCNC-213ENST00000523541 CD164L2Q6UWJ8 174 aa11.08□□□□□ -0.64
CCNC-213ENST00000523541 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
CCNC-213ENST00000523541 IGHV1-58A0A0C4DH39 117 aa11.06□□□□□ -0.64
CCNC-213ENST00000523541 D6R8Y8 96 aa11.06□□□□□ -0.64
CCNC-213ENST00000523541 XCL1P47992 114 aa11.06□□□□□ -0.64
CCNC-213ENST00000523541 PKIGQ9Y2B9 76 aa11.06□□□□□ -0.64
CCNC-213ENST00000523541 HERC1Q15751 4861 aa11.05□□□□□ -0.64
CCNC-213ENST00000523541 UQCC3Q6UW78 93 aa11.05□□□□□ -0.64
CCNC-213ENST00000523541 ORMDL3Q8N138 153 aa11.05□□□□□ -0.64
CCNC-213ENST00000523541 SMIM2Q9BVW6 85 aa11.05□□□□□ -0.64
CCNC-213ENST00000523541 LAMTOR2Q9Y2Q5 125 aa11.05□□□□□ -0.64
CCNC-213ENST00000523541 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
CCNC-213ENST00000523541 RPL37AP61513 92 aaKnown RBP11.04□□□□□ -0.64
CCNC-213ENST00000523541 TMEM136Q6ZRR5 245 aa11.04□□□□□ -0.64
CCNC-213ENST00000523541 KRTAP3-3Q9BYR6 98 aa11.04□□□□□ -0.64
CCNC-213ENST00000523541 KRTAP3-2Q9BYR7 98 aa11.04□□□□□ -0.64
CCNC-213ENST00000523541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.04□□□□□ -0.64
CCNC-213ENST00000523541 HIGD2BQ4VC39 106 aa11.03□□□□□ -0.64
CCNC-213ENST00000523541 IMMP2LQ96T52 175 aa11.03□□□□□ -0.64
CCNC-213ENST00000523541 SPANXA1Q9NS26 97 aa11.02□□□□□ -0.65
CCNC-213ENST00000523541 NPYP01303 97 aa11.01□□□□□ -0.65
CCNC-213ENST00000523541 RAB5AP20339 215 aa11.01□□□□□ -0.65
CCNC-213ENST00000523541 KRTAP10-4P60372 401 aaPredicted RBP11.01□□□□□ -0.65
CCNC-213ENST00000523541 MRPS36P82909 103 aaKnown RBP11.01□□□□□ -0.65
CCNC-213ENST00000523541 PRELID3AQ96N28 172 aa11.01□□□□□ -0.65
CCNC-213ENST00000523541 ZNF561-AS1K7EIQ3 104 aa11□□□□□ -0.65
CCNC-213ENST00000523541 COX7A2LO14548 114 aa11□□□□□ -0.65
CCNC-213ENST00000523541 SPACA4Q8TDM5 124 aa11□□□□□ -0.65
CCNC-213ENST00000523541 LINC00474Q9P2X8 69 aa11□□□□□ -0.65
CCNC-213ENST00000523541 PANO1I0J062 215 aa10.99□□□□□ -0.65
CCNC-213ENST00000523541 MALP21145 153 aa10.99□□□□□ -0.65
CCNC-213ENST00000523541 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
CCNC-213ENST00000523541 CHTF8P0CG12 524 aa10.98□□□□□ -0.65
CCNC-213ENST00000523541 COX6A2Q02221 97 aa10.98□□□□□ -0.65
CCNC-213ENST00000523541 CTDSP1Q9GZU7 261 aa10.98□□□□□ -0.65
CCNC-213ENST00000523541 PLAC8Q9NZF1 115 aa10.98□□□□□ -0.65
CCNC-213ENST00000523541 PYGO1Q9Y3Y4 419 aa10.98□□□□□ -0.65
CCNC-213ENST00000523541 A0A087WYN8 130 aa10.97□□□□□ -0.65
CCNC-213ENST00000523541 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
CCNC-213ENST00000523541 TMEM218A2RU14 115 aa10.97□□□□□ -0.65
CCNC-213ENST00000523541 K7EMI3 77 aa10.97□□□□□ -0.65
CCNC-213ENST00000523541 APOMO95445 188 aa10.97□□□□□ -0.65
CCNC-213ENST00000523541 TRAV9-1A0A075B6T8 112 aa10.96□□□□□ -0.65
CCNC-213ENST00000523541 RPL39P62891 51 aaKnown RBP10.96□□□□□ -0.65
CCNC-213ENST00000523541 IFITM2Q01629 132 aa10.96□□□□□ -0.65
CCNC-213ENST00000523541 Q6ZUT4 128 aa10.96□□□□□ -0.65
CCNC-213ENST00000523541 MAP1LC3AQ9H492 121 aa10.96□□□□□ -0.65
CCNC-213ENST00000523541 IGKV2-24A0A0C4DH68 120 aa10.95□□□□□ -0.66
CCNC-213ENST00000523541 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
CCNC-213ENST00000523541 SYCNQ0VAF6 134 aa10.95□□□□□ -0.66
CCNC-213ENST00000523541 PRSS3P2Q8NHM4 247 aa10.95□□□□□ -0.66
CCNC-213ENST00000523541 C2orf48Q96LS8 159 aa10.95□□□□□ -0.66
CCNC-213ENST00000523541 CARD19Q96LW7 228 aa10.95□□□□□ -0.66
CCNC-213ENST00000523541 SEC11CQ9BY50 192 aa10.95□□□□□ -0.66
CCNC-213ENST00000523541 F8WDY8 70 aa10.94□□□□□ -0.66
CCNC-213ENST00000523541 OXTP01178 125 aa10.94□□□□□ -0.66
CCNC-213ENST00000523541 G0S2P27469 103 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms