RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PKHD1L1Q86WI1 4243 aa10.93□□□□□ -0.66
SQLE-205ENST00000521232 MRPL52Q86TS9 123 aaKnown RBP10.93□□□□□ -0.66
SQLE-205ENST00000521232 LRP1Q07954 4544 aaKnown RBP10.93□□□□□ -0.66
SQLE-205ENST00000521232 IGHV3-64A0A075B6Q5 118 aa10.92□□□□□ -0.66
SQLE-205ENST00000521232 A0A1B0GW15 77 aa10.92□□□□□ -0.66
SQLE-205ENST00000521232 PANO1I0J062 215 aa10.92□□□□□ -0.66
SQLE-205ENST00000521232 SUMO2P61956 95 aaKnown RBP10.92□□□□□ -0.66
SQLE-205ENST00000521232 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
SQLE-205ENST00000521232 MRPL51Q4U2R6 128 aaKnown RBP10.92□□□□□ -0.66
SQLE-205ENST00000521232 CDC42SE2Q9NRR3 84 aa10.92□□□□□ -0.66
SQLE-205ENST00000521232 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
SQLE-205ENST00000521232 LINC00959A0A1B0GUT2 108 aa10.91□□□□□ -0.66
SQLE-205ENST00000521232 C7orf77A4D0Y5 90 aa10.91□□□□□ -0.66
SQLE-205ENST00000521232 LINC00862A6NCI5 91 aa10.91□□□□□ -0.66
SQLE-205ENST00000521232 CAMPP49913 170 aa10.91□□□□□ -0.66
SQLE-205ENST00000521232 FOXI1Q12951 378 aa10.91□□□□□ -0.66
SQLE-205ENST00000521232 PPP1R2P9O14990 202 aa10.9□□□□□ -0.66
SQLE-205ENST00000521232 TRBV24-1A0A075B6N3 115 aa10.89□□□□□ -0.67
SQLE-205ENST00000521232 FCER1GP30273 86 aa10.89□□□□□ -0.67
SQLE-205ENST00000521232 ZNF664Q8N3J9 261 aa10.89□□□□□ -0.67
SQLE-205ENST00000521232 KIR2DL4Q99706 377 aa10.89□□□□□ -0.67
SQLE-205ENST00000521232 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
SQLE-205ENST00000521232 CSDC2Q9Y534 153 aaKnown RBP10.89□□□□□ -0.67
SQLE-205ENST00000521232 GVQW2A0A096LPI5 108 aaPredicted RBP10.88□□□□□ -0.67
SQLE-205ENST00000521232 KRTAP29-1A8MX34 341 aaPredicted RBP10.88□□□□□ -0.67
SQLE-205ENST00000521232 CCL25O15444 150 aa10.88□□□□□ -0.67
SQLE-205ENST00000521232 XCL1P47992 114 aa10.88□□□□□ -0.67
SQLE-205ENST00000521232 HIGD2BQ4VC39 106 aa10.88□□□□□ -0.67
SQLE-205ENST00000521232 A0A1B0GXF2 115 aa10.87□□□□□ -0.67
SQLE-205ENST00000521232 S100A8P05109 93 aa10.87□□□□□ -0.67
SQLE-205ENST00000521232 CKS2P33552 79 aa10.87□□□□□ -0.67
SQLE-205ENST00000521232 RPL32P62910 135 aaKnown RBP10.87□□□□□ -0.67
SQLE-205ENST00000521232 SS18Q15532 418 aa10.87□□□□□ -0.67
SQLE-205ENST00000521232 RPL37AP61513 92 aaKnown RBP10.86□□□□□ -0.67
SQLE-205ENST00000521232 HBBP68871 147 aa10.86□□□□□ -0.67
SQLE-205ENST00000521232 SMAGPQ0VAQ4 97 aa10.86□□□□□ -0.67
SQLE-205ENST00000521232 MRPL54Q6P161 138 aaKnown RBP10.86□□□□□ -0.67
SQLE-205ENST00000521232 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
SQLE-205ENST00000521232 UBE2D4Q9Y2X8 147 aa10.86□□□□□ -0.67
SQLE-205ENST00000521232 F8W036 122 aa10.85□□□□□ -0.67
SQLE-205ENST00000521232 J3QL48 77 aa10.85□□□□□ -0.67
SQLE-205ENST00000521232 TNFRSF6BO95407 300 aa10.85□□□□□ -0.67
SQLE-205ENST00000521232 SPACA4Q8TDM5 124 aa10.85□□□□□ -0.67
SQLE-205ENST00000521232 DPH3Q96FX2 82 aa10.85□□□□□ -0.67
SQLE-205ENST00000521232 IGHV1-58A0A0C4DH39 117 aa10.84□□□□□ -0.67
SQLE-205ENST00000521232 TCAPO15273 167 aa10.84□□□□□ -0.67
SQLE-205ENST00000521232 CHTF8P0CG12 524 aa10.84□□□□□ -0.67
SQLE-205ENST00000521232 COX6A2Q02221 97 aa10.84□□□□□ -0.67
SQLE-205ENST00000521232 LCE2DQ5TA82 110 aaPredicted RBP10.84□□□□□ -0.67
SQLE-205ENST00000521232 TIMM21Q9BVV7 248 aa10.84□□□□□ -0.67
SQLE-205ENST00000521232 A0A087WYN8 130 aa10.83□□□□□ -0.68
SQLE-205ENST00000521232 C1orf196B1AJZ1 125 aa10.83□□□□□ -0.68
SQLE-205ENST00000521232 D6R8Y8 96 aa10.83□□□□□ -0.68
SQLE-205ENST00000521232 RAB14P61106 215 aa10.83□□□□□ -0.68
SQLE-205ENST00000521232 ATP5L2Q7Z4Y8 100 aa10.83□□□□□ -0.68
SQLE-205ENST00000521232 TMEM18Q96B42 140 aa10.83□□□□□ -0.68
SQLE-205ENST00000521232 PHOX2AO14813 284 aa10.82□□□□□ -0.68
SQLE-205ENST00000521232 PPBPP02775 128 aa10.82□□□□□ -0.68
SQLE-205ENST00000521232 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
SQLE-205ENST00000521232 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
SQLE-205ENST00000521232 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
SQLE-205ENST00000521232 PLAC8Q9NZF1 115 aa10.81□□□□□ -0.68
SQLE-205ENST00000521232 NPYP01303 97 aa10.8□□□□□ -0.68
SQLE-205ENST00000521232 OXTP01178 125 aa10.79□□□□□ -0.68
SQLE-205ENST00000521232 RNASE13Q5GAN3 156 aaKnown RBP10.79□□□□□ -0.68
SQLE-205ENST00000521232 ANAPC16Q96DE5 110 aa10.79□□□□□ -0.68
SQLE-205ENST00000521232 LINC00526Q96FQ7 95 aa10.79□□□□□ -0.68
SQLE-205ENST00000521232 TRAV13-1A0A0B4J241 112 aa10.78□□□□□ -0.68
SQLE-205ENST00000521232 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
SQLE-205ENST00000521232 MT-ND4LP03901 98 aa10.78□□□□□ -0.68
SQLE-205ENST00000521232 HNRNPA3P51991 378 aaKnown RBP10.78□□□□□ -0.68
SQLE-205ENST00000521232 RPL39P62891 51 aaKnown RBP10.78□□□□□ -0.68
SQLE-205ENST00000521232 TMEM136Q6ZRR5 245 aa10.78□□□□□ -0.68
SQLE-205ENST00000521232 Q6ZUT4 128 aa10.78□□□□□ -0.68
SQLE-205ENST00000521232 ORMDL3Q8N138 153 aa10.78□□□□□ -0.68
SQLE-205ENST00000521232 FAM104AQ969W3 186 aa10.78□□□□□ -0.68
SQLE-205ENST00000521232 COX7A2LO14548 114 aa10.77□□□□□ -0.69
SQLE-205ENST00000521232 MAJINQ3KP22 176 aa10.77□□□□□ -0.69
SQLE-205ENST00000521232 CLLU1Q5K131 121 aa10.77□□□□□ -0.69
SQLE-205ENST00000521232 IGKV2-24A0A0C4DH68 120 aa10.76□□□□□ -0.69
SQLE-205ENST00000521232 PRSS47A8MTI9 375 aa10.76□□□□□ -0.69
SQLE-205ENST00000521232 MALP21145 153 aa10.76□□□□□ -0.69
SQLE-205ENST00000521232 SYCNQ0VAF6 134 aa10.76□□□□□ -0.69
SQLE-205ENST00000521232 CARD19Q96LW7 228 aa10.76□□□□□ -0.69
SQLE-205ENST00000521232 PRELID3AQ96N28 172 aa10.76□□□□□ -0.69
SQLE-205ENST00000521232 SPANXA1Q9NS26 97 aa10.76□□□□□ -0.69
SQLE-205ENST00000521232 PKIGQ9Y2B9 76 aa10.76□□□□□ -0.69
SQLE-205ENST00000521232 A0A096LNI7 61 aa10.75□□□□□ -0.69
SQLE-205ENST00000521232 MRPS36P82909 103 aaKnown RBP10.75□□□□□ -0.69
SQLE-205ENST00000521232 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
SQLE-205ENST00000521232 IGLV4-69A0A075B6H9 119 aa10.74□□□□□ -0.69
SQLE-205ENST00000521232 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
SQLE-205ENST00000521232 STPG4Q8N801 248 aa10.74□□□□□ -0.69
SQLE-205ENST00000521232 LAMTOR2Q9Y2Q5 125 aa10.74□□□□□ -0.69
SQLE-205ENST00000521232 RAB5AP20339 215 aa10.73□□□□□ -0.69
SQLE-205ENST00000521232 OPRPNQ99935 248 aaPredicted RBP10.73□□□□□ -0.69
SQLE-205ENST00000521232 APOMO95445 188 aa10.72□□□□□ -0.69
SQLE-205ENST00000521232 Q6ZRU5 148 aa10.72□□□□□ -0.69
SQLE-205ENST00000521232 C7orf33Q8WU49 177 aa10.72□□□□□ -0.69
SQLE-205ENST00000521232 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms