RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 TMEM101Q96IK0 257 aa12.61□□□□□ -0.39
PABPC1-217ENST00000521067 ST20Q9HBF5 79 aa12.61□□□□□ -0.39
PABPC1-217ENST00000521067 KRTAP10-8P60410 259 aa12.6□□□□□ -0.39
PABPC1-217ENST00000521067 RAB4AP20338 218 aa12.59□□□□□ -0.39
PABPC1-217ENST00000521067 SRSF9Q13242 221 aaKnown RBP eCLIP12.59□□□□□ -0.39
PABPC1-217ENST00000521067 CT83Q5H943 113 aa12.59□□□□□ -0.39
PABPC1-217ENST00000521067 MRPL52Q86TS9 123 aaKnown RBP12.59□□□□□ -0.39
PABPC1-217ENST00000521067 MRAP2Q96G30 205 aa12.59□□□□□ -0.39
PABPC1-217ENST00000521067 CARD19Q96LW7 228 aa12.59□□□□□ -0.39
PABPC1-217ENST00000521067 TMEM191AQ9H0A3 160 aa12.59□□□□□ -0.39
PABPC1-217ENST00000521067 A0A0J9YXV3 536 aa12.58□□□□□ -0.4
PABPC1-217ENST00000521067 CEBPGP53567 150 aa12.58□□□□□ -0.4
PABPC1-217ENST00000521067 CD164L2Q6UWJ8 174 aa12.58□□□□□ -0.4
PABPC1-217ENST00000521067 ALKAL2Q6UX46 152 aa12.58□□□□□ -0.4
PABPC1-217ENST00000521067 ZNF664Q8N3J9 261 aa12.58□□□□□ -0.4
PABPC1-217ENST00000521067 LINC00474Q9P2X8 69 aa12.58□□□□□ -0.4
PABPC1-217ENST00000521067 TRBV27A0A0K0K1C4 114 aa12.57□□□□□ -0.4
PABPC1-217ENST00000521067 HIGD1CA8MV81 97 aa12.57□□□□□ -0.4
PABPC1-217ENST00000521067 SYCNQ0VAF6 134 aa12.57□□□□□ -0.4
PABPC1-217ENST00000521067 SS18Q15532 418 aa12.57□□□□□ -0.4
PABPC1-217ENST00000521067 SPINK6Q6UWN8 80 aa12.57□□□□□ -0.4
PABPC1-217ENST00000521067 A0A1B0GUT8 65 aa12.56□□□□□ -0.4
PABPC1-217ENST00000521067 AMN1Q8IY45 258 aa12.56□□□□□ -0.4
PABPC1-217ENST00000521067 TSKUQ8WUA8 353 aa12.56□□□□□ -0.4
PABPC1-217ENST00000521067 SMKR1H3BMG3 65 aa12.55□□□□□ -0.4
PABPC1-217ENST00000521067 BLOC1S1P78537 153 aa12.55□□□□□ -0.4
PABPC1-217ENST00000521067 LINC01551Q86U37 167 aa12.55□□□□□ -0.4
PABPC1-217ENST00000521067 C7orf77A4D0Y5 90 aa12.54□□□□□ -0.4
PABPC1-217ENST00000521067 ZNF561-AS1K7EIQ3 104 aa12.54□□□□□ -0.4
PABPC1-217ENST00000521067 PTTG1IPP53801 180 aa12.54□□□□□ -0.4
PABPC1-217ENST00000521067 BORCS7Q96B45 105 aa12.54□□□□□ -0.4
PABPC1-217ENST00000521067 FAM210AQ96ND0 272 aa12.54□□□□□ -0.4
PABPC1-217ENST00000521067 IGLV4-69A0A075B6H9 119 aa12.53□□□□□ -0.4
PABPC1-217ENST00000521067 A0A1W2PNN7 141 aa12.53□□□□□ -0.4
PABPC1-217ENST00000521067 CAMPP49913 170 aa12.53□□□□□ -0.4
PABPC1-217ENST00000521067 Q6ZRP5 223 aa12.53□□□□□ -0.4
PABPC1-217ENST00000521067 RNASE13Q5GAN3 156 aaKnown RBP12.52□□□□□ -0.41
PABPC1-217ENST00000521067 NRACQ8N912 160 aa12.52□□□□□ -0.41
PABPC1-217ENST00000521067 SMIM7Q9BQ49 75 aa12.52□□□□□ -0.41
PABPC1-217ENST00000521067 OSTCQ9NRP0 149 aa12.52□□□□□ -0.41
PABPC1-217ENST00000521067 VCYO14598 125 aa12.51□□□□□ -0.41
PABPC1-217ENST00000521067 GAGE2BQ13066 116 aa12.51□□□□□ -0.41
PABPC1-217ENST00000521067 PKIGQ9Y2B9 76 aa12.51□□□□□ -0.41
PABPC1-217ENST00000521067 UBE2D4Q9Y2X8 147 aa12.51□□□□□ -0.41
PABPC1-217ENST00000521067 C1orf196B1AJZ1 125 aa12.5□□□□□ -0.41
PABPC1-217ENST00000521067 REG3GQ6UW15 175 aa12.5□□□□□ -0.41
PABPC1-217ENST00000521067 NUP35Q8NFH5 326 aa12.5□□□□□ -0.41
PABPC1-217ENST00000521067 V9GYV3 84 aa12.5□□□□□ -0.41
PABPC1-217ENST00000521067 LOC107984640A0A0U1RRK4 108 aa12.49□□□□□ -0.41
PABPC1-217ENST00000521067 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
PABPC1-217ENST00000521067 CSDC2Q9Y534 153 aaKnown RBP12.49□□□□□ -0.41
PABPC1-217ENST00000521067 ZNF727A8MUV8 499 aa12.48□□□□□ -0.41
PABPC1-217ENST00000521067 COX7A2LO14548 114 aa12.48□□□□□ -0.41
PABPC1-217ENST00000521067 SRP19P09132 144 aaKnown RBP12.48□□□□□ -0.41
PABPC1-217ENST00000521067 MALP21145 153 aa12.48□□□□□ -0.41
PABPC1-217ENST00000521067 FCER1GP30273 86 aa12.48□□□□□ -0.41
PABPC1-217ENST00000521067 C5orf38Q86SI9 138 aa12.48□□□□□ -0.41
PABPC1-217ENST00000521067 LPAP08519 4548 aa12.48□□□□□ -0.41
PABPC1-217ENST00000521067 TRAV13-1A0A0B4J241 112 aa12.47□□□□□ -0.41
PABPC1-217ENST00000521067 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-217ENST00000521067 SUMO2P61956 95 aaKnown RBP12.47□□□□□ -0.41
PABPC1-217ENST00000521067 RIGQ13278 110 aa12.46□□□□□ -0.41
PABPC1-217ENST00000521067 Q6ZUT4 128 aa12.46□□□□□ -0.41
PABPC1-217ENST00000521067 ISOC2Q96AB3 205 aa12.46□□□□□ -0.41
PABPC1-217ENST00000521067 CAMK2N2Q96S95 79 aa12.46□□□□□ -0.41
PABPC1-217ENST00000521067 APOMO95445 188 aa12.45□□□□□ -0.42
PABPC1-217ENST00000521067 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
PABPC1-217ENST00000521067 C9orf116Q5BN46 136 aaPredicted RBP12.45□□□□□ -0.42
PABPC1-217ENST00000521067 AKAP14Q86UN6 197 aa12.45□□□□□ -0.42
PABPC1-217ENST00000521067 FAM104AQ969W3 186 aa12.45□□□□□ -0.42
PABPC1-217ENST00000521067 C2orf48Q96LS8 159 aa12.44□□□□□ -0.42
PABPC1-217ENST00000521067 OPRPNQ99935 248 aaPredicted RBP12.44□□□□□ -0.42
PABPC1-217ENST00000521067 PSORS1C2Q9UIG4 136 aa12.44□□□□□ -0.42
PABPC1-217ENST00000521067 FAM104BQ5XKR9 115 aa12.43□□□□□ -0.42
PABPC1-217ENST00000521067 KIR2DL4Q99706 377 aa12.43□□□□□ -0.42
PABPC1-217ENST00000521067 PPP1R17O96001 155 aa12.42□□□□□ -0.42
PABPC1-217ENST00000521067 PHF5AQ7RTV0 110 aaKnown RBP12.42□□□□□ -0.42
PABPC1-217ENST00000521067 TIMM21Q9BVV7 248 aa12.42□□□□□ -0.42
PABPC1-217ENST00000521067 hCG_2014768A0A024R1R8 64 aa12.41□□□□□ -0.42
PABPC1-217ENST00000521067 RPL23P62829 140 aaKnown RBP12.41□□□□□ -0.42
PABPC1-217ENST00000521067 C9JQL5 133 aa12.4□□□□□ -0.42
PABPC1-217ENST00000521067 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
PABPC1-217ENST00000521067 RPL18AQ02543 176 aaKnown RBP12.4□□□□□ -0.42
PABPC1-217ENST00000521067 SPAG11BQ08648 103 aa12.4□□□□□ -0.42
PABPC1-217ENST00000521067 TMEM241Q24JQ0 296 aa12.4□□□□□ -0.42
PABPC1-217ENST00000521067 NAT8BQ9UHF3 227 aa12.4□□□□□ -0.42
PABPC1-217ENST00000521067 TRBV24-1A0A075B6N3 115 aa12.39□□□□□ -0.43
PABPC1-217ENST00000521067 PPP1R2P9O14990 202 aa12.39□□□□□ -0.43
PABPC1-217ENST00000521067 SMAGPQ0VAQ4 97 aa12.39□□□□□ -0.43
PABPC1-217ENST00000521067 MT-ND6P03923 174 aa12.38□□□□□ -0.43
PABPC1-217ENST00000521067 RNF151Q2KHN1 245 aa12.38□□□□□ -0.43
PABPC1-217ENST00000521067 FAM74A3Q4VXF1 159 aa12.38□□□□□ -0.43
PABPC1-217ENST00000521067 C20orf78Q9BR46 151 aa12.38□□□□□ -0.43
PABPC1-217ENST00000521067 IGHV3OR16-9A0A0B4J2B5 98 aa12.37□□□□□ -0.43
PABPC1-217ENST00000521067 SMIM27A0A1W2PRY6 76 aa12.37□□□□□ -0.43
PABPC1-217ENST00000521067 C1orf137Q5JT78 98 aa12.37□□□□□ -0.43
PABPC1-217ENST00000521067 C10orf25Q5T742 122 aa12.37□□□□□ -0.43
PABPC1-217ENST00000521067 KRTAP11-1Q8IUC1 163 aa12.37□□□□□ -0.43
PABPC1-217ENST00000521067 LINC00862A6NCI5 91 aa12.36□□□□□ -0.43
PABPC1-217ENST00000521067 CKS2P33552 79 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms