RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 RHOHQ15669 191 aa6.19□□□□□ -1.42
CTNNA1-221ENST00000520339 LELP1Q5T871 98 aa6.19□□□□□ -1.42
CTNNA1-221ENST00000520339 ZC2HC1AQ96GY0 325 aa6.19□□□□□ -1.42
CTNNA1-221ENST00000520339 RPP21Q9H633 154 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-221ENST00000520339 IGKV3D-20A0A0C4DH25 116 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 C19orf71A6NCJ1 209 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 ESDP10768 282 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 FAM162BQ5T6X4 162 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 COX8CQ7Z4L0 72 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 ATP6V0E2Q8NHE4 81 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 MPLKIPQ8TAP9 179 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 NTN5Q8WTR8 489 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 MRAP2Q96G30 205 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 SIGMAR1Q99720 223 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 VAMP8Q9BV40 100 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 GTSF1LQ9H1H1 148 aa6.18□□□□□ -1.42
CTNNA1-221ENST00000520339 SMIM27A0A1W2PRY6 76 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 LINC00694P0DN24 101 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 CKS1BP61024 79 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 COX19Q49B96 90 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 PDZD11Q5EBL8 140 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 OR10J3Q5JRS4 329 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 Q5VSD8 79 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 TSKUQ8WUA8 353 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 NAT8BQ9UHF3 227 aa6.17□□□□□ -1.42
CTNNA1-221ENST00000520339 IGLV5-52A0A0A0MRZ9 124 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 FABP5P3A8MUU1 101 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 A8MWL6 223 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 VCYO14598 125 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 PSCAO43653 123 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 SH2D1AO60880 128 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 IGHV3-30P01768 117 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 IGHV3-33P01772 117 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 SMR3BP02814 79 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 IGHV3-30-3P0DP02 117 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 IGHV3-30-5P0DP03 117 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 UFSP1Q6NVU6 142 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 ZFP2Q6ZN57 461 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 STPG4Q8N801 248 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 Q8N814 137 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 TMEM70Q9BUB7 260 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 GFRA4Q9GZZ7 299 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 Q9HAA7 133 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 Q9UF83 564 aa6.16□□□□□ -1.42
CTNNA1-221ENST00000520339 MYCBP2O75592 4640 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 FAM231BA6NCW3 169 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 A8MWV9 139 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 S100A4P26447 101 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 CRIP1P50238 77 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 HNRNPA3P51991 378 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 HAMPP81172 84 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 GAGE4Q13068 117 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 GAGE5Q13069 117 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 WFDC2Q14508 124 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 LAGE3Q14657 143 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 VAMP3Q15836 100 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 GTF2H5Q6ZYL4 71 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 TPPP3Q9BW30 176 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 SAMD10Q9BYL1 202 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 JPT2Q9H910 190 aa6.15□□□□□ -1.42
CTNNA1-221ENST00000520339 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 HIGD1CA8MV81 97 aa6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 J3QR89 54 aa6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 CTRLP40313 264 aa6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 ASIPP42127 132 aa6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 ATP5L2Q7Z4Y8 100 aa6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 C14orf178Q8N769 122 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 VCX2Q9H322 139 aa6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 DMBT1Q9UGM3 2413 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-221ENST00000520339 MT-ND6P03923 174 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 ARMS2P0C7Q2 107 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 BATFQ16520 125 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 C5orf47Q569G3 176 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 MRPL54Q6P161 138 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 RASL11AQ6T310 242 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 FER1L6-AS1Q8NA97 138 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 NUP35Q8NFH5 326 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 GTSF1Q8WW33 167 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 BORCS7Q96B45 105 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 PAM16Q9Y3D7 125 aa6.13□□□□□ -1.43
CTNNA1-221ENST00000520339 TRAV8-3A0A0A6YYJ7 113 aa6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 GRIFINA4D1Z8 144 aa6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 H3BVH4 76 aa6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 IGLC3P0DOY3 106 aa6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 HBBP68871 147 aa6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 DAZ4Q86SG3 579 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 PGLYRP4Q96LB8 373 aa6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 GNB1LQ9BYB4 327 aa6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 DAZ3Q9NR90 486 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 TRAPPC1Q9Y5R8 145 aa6.12□□□□□ -1.43
CTNNA1-221ENST00000520339 TMSB15BA0A087X1C1 80 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 A0A1B0GW15 77 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 A0A1B0GXF2 115 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 A4D1N5 150 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 HLA-DQA1P01909 254 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 FOXA3P55318 350 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 HERV-K104P63124 156 aa6.11□□□□□ -1.43
CTNNA1-221ENST00000520339 PMCHL1Q16048 86 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms