RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 HECTD1Q9ULT8 2610 aa18.35■□□□□ 0.53
COL13A1-213ENST00000520267 NTM-AS1Q6ZSK4 140 aa18.35■□□□□ 0.53
COL13A1-213ENST00000520267 GAGE12JA6NER3 117 aa18.34■□□□□ 0.53
COL13A1-213ENST00000520267 LINC00694P0DN24 101 aa18.34■□□□□ 0.53
COL13A1-213ENST00000520267 GAGE4Q13068 117 aa18.34■□□□□ 0.53
COL13A1-213ENST00000520267 GAGE5Q13069 117 aa18.34■□□□□ 0.53
COL13A1-213ENST00000520267 GAGE13Q4V321 117 aa18.34■□□□□ 0.53
COL13A1-213ENST00000520267 UBE2D3P61077 147 aa18.34■□□□□ 0.53
COL13A1-213ENST00000520267 UBE2D2P62837 147 aa18.34■□□□□ 0.53
COL13A1-213ENST00000520267 IGHV1-58A0A0C4DH39 117 aa18.33■□□□□ 0.53
COL13A1-213ENST00000520267 DGAT2L7PQ6IED9 249 aa18.33■□□□□ 0.53
COL13A1-213ENST00000520267 DAZ4Q86SG3 579 aaKnown RBP18.33■□□□□ 0.52
COL13A1-213ENST00000520267 DAZ3Q9NR90 486 aaKnown RBP18.33■□□□□ 0.52
COL13A1-213ENST00000520267 TRGV2A0A075B6R0 118 aa18.32■□□□□ 0.52
COL13A1-213ENST00000520267 SPINK8P0C7L1 97 aa18.32■□□□□ 0.52
COL13A1-213ENST00000520267 CFC1BP0CG36 223 aa18.32■□□□□ 0.52
COL13A1-213ENST00000520267 CFC1P0CG37 223 aa18.32■□□□□ 0.52
COL13A1-213ENST00000520267 OVOL2Q9BRP0 275 aa18.32■□□□□ 0.52
COL13A1-213ENST00000520267 A0A0J9YXY3 114 aa18.32■□□□□ 0.52
COL13A1-213ENST00000520267 INAFM1C9JVW0 142 aa18.32■□□□□ 0.52
COL13A1-213ENST00000520267 TSPAN13O95857 204 aa18.32■□□□□ 0.52
COL13A1-213ENST00000520267 A8MZ25 164 aa18.3■□□□□ 0.52
COL13A1-213ENST00000520267 H3BMG7 143 aa18.3■□□□□ 0.52
COL13A1-213ENST00000520267 K7ERU9 68 aa18.3■□□□□ 0.52
COL13A1-213ENST00000520267 GEMIN7Q9H840 131 aaKnown RBP18.3■□□□□ 0.52
COL13A1-213ENST00000520267 VSIG2Q96IQ7 327 aa18.3■□□□□ 0.52
COL13A1-213ENST00000520267 SBSPONQ8IVN8 264 aa18.28■□□□□ 0.52
COL13A1-213ENST00000520267 LOC100131303A0A0U1RQF7 123 aa18.28■□□□□ 0.52
COL13A1-213ENST00000520267 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.28■□□□□ 0.52
COL13A1-213ENST00000520267 CDKN2A-AS1Q9UH64 79 aa18.28■□□□□ 0.52
COL13A1-213ENST00000520267 TIRAPP58753 221 aa18.27■□□□□ 0.52
COL13A1-213ENST00000520267 MUSTN1Q8IVN3 82 aa18.27■□□□□ 0.52
COL13A1-213ENST00000520267 SPATA3Q8NHX4 192 aa18.27■□□□□ 0.52
COL13A1-213ENST00000520267 A4D1N5 150 aa18.26■□□□□ 0.51
COL13A1-213ENST00000520267 TMEM238C9JI98 176 aa18.26■□□□□ 0.51
COL13A1-213ENST00000520267 COX6A2Q02221 97 aa18.26■□□□□ 0.51
COL13A1-213ENST00000520267 SFTA2Q6UW10 78 aa18.26■□□□□ 0.51
COL13A1-213ENST00000520267 OTOGQ6ZRI0 2925 aa18.26■□□□□ 0.51
COL13A1-213ENST00000520267 NDUFA12Q9UI09 145 aa18.26■□□□□ 0.51
COL13A1-213ENST00000520267 IGLV5-45A0A087WSX0 123 aa18.25■□□□□ 0.51
COL13A1-213ENST00000520267 LITAFQ99732 161 aa18.25■□□□□ 0.51
COL13A1-213ENST00000520267 EIF4EBP3O60516 100 aaPredicted RBP18.24■□□□□ 0.51
COL13A1-213ENST00000520267 CSDC2Q9Y534 153 aaKnown RBP18.24■□□□□ 0.51
COL13A1-213ENST00000520267 TRBV6-4A0A1B0GX49 114 aa18.24■□□□□ 0.51
COL13A1-213ENST00000520267 TRGV4A0A0C4DH28 118 aa18.23■□□□□ 0.51
COL13A1-213ENST00000520267 WFDC2Q14508 124 aa18.23■□□□□ 0.51
COL13A1-213ENST00000520267 F8W1H4 67 aa18.23■□□□□ 0.51
COL13A1-213ENST00000520267 CIDEAO60543 219 aa18.23■□□□□ 0.51
COL13A1-213ENST00000520267 LINC00242Q5T6M2 205 aa18.23■□□□□ 0.51
COL13A1-213ENST00000520267 LOC107984156A0A0G2JMH3 177 aa18.22■□□□□ 0.51
COL13A1-213ENST00000520267 ARL17AQ8IVW1 177 aa18.22■□□□□ 0.51
COL13A1-213ENST00000520267 PRO1854Q9UHT4 67 aa18.22■□□□□ 0.51
COL13A1-213ENST00000520267 RPL24P83731 157 aaKnown RBP18.21■□□□□ 0.51
COL13A1-213ENST00000520267 MTURNQ8N3F0 131 aa18.21■□□□□ 0.51
COL13A1-213ENST00000520267 GTSF1LQ9H1H1 148 aa18.21■□□□□ 0.51
COL13A1-213ENST00000520267 NOTCH2Q04721 2471 aa18.21■□□□□ 0.51
COL13A1-213ENST00000520267 FHL2Q14192 279 aa18.21■□□□□ 0.51
COL13A1-213ENST00000520267 CDC42SE2Q9NRR3 84 aa18.21■□□□□ 0.51
COL13A1-213ENST00000520267 CRLF1O75462 422 aa18.2■□□□□ 0.5
COL13A1-213ENST00000520267 ADAMTSL4-AS1Q5T5F5 129 aa18.2■□□□□ 0.5
COL13A1-213ENST00000520267 ZFAND6Q6FIF0 208 aa18.2■□□□□ 0.5
COL13A1-213ENST00000520267 TMEM101Q96IK0 257 aa18.2■□□□□ 0.5
COL13A1-213ENST00000520267 PRO0461Q9UI25 63 aa18.2■□□□□ 0.5
COL13A1-213ENST00000520267 G3V4G9 280 aa18.19■□□□□ 0.5
COL13A1-213ENST00000520267 HERVK_113P63121 156 aa18.19■□□□□ 0.5
COL13A1-213ENST00000520267 FAM19A3Q7Z5A8 133 aa18.19■□□□□ 0.5
COL13A1-213ENST00000520267 TMEM243Q9BU79 118 aa18.19■□□□□ 0.5
COL13A1-213ENST00000520267 FN1P02751 2386 aaKnown RBP18.19■□□□□ 0.5
COL13A1-213ENST00000520267 C2CD3Q4AC94 2353 aa18.19■□□□□ 0.5
COL13A1-213ENST00000520267 TRAV13-1A0A0B4J241 112 aa18.19■□□□□ 0.5
COL13A1-213ENST00000520267 TEX48A0A1B0GUV7 120 aa18.16■□□□□ 0.5
COL13A1-213ENST00000520267 UBE2L6O14933 153 aa18.16■□□□□ 0.5
COL13A1-213ENST00000520267 PSMB2P49721 201 aa18.16■□□□□ 0.5
COL13A1-213ENST00000520267 SPANXDQ9BXN6 97 aa18.16■□□□□ 0.5
COL13A1-213ENST00000520267 SPANXCQ9NY87 97 aa18.16■□□□□ 0.5
COL13A1-213ENST00000520267 A0A0B4J2C4 111 aa18.15■□□□□ 0.5
COL13A1-213ENST00000520267 PRSS2P07478 247 aa18.15■□□□□ 0.5
COL13A1-213ENST00000520267 DEFB130BP0DP73 79 aa18.15■□□□□ 0.5
COL13A1-213ENST00000520267 DEFB130AP0DP74 79 aa18.15■□□□□ 0.5
COL13A1-213ENST00000520267 INSL3P51460 131 aa18.15■□□□□ 0.5
COL13A1-213ENST00000520267 IGHV3-33P01772 117 aa18.14■□□□□ 0.49
COL13A1-213ENST00000520267 SMAGPQ0VAQ4 97 aa18.14■□□□□ 0.49
COL13A1-213ENST00000520267 C9orf66Q5T8R8 295 aa18.14■□□□□ 0.49
COL13A1-213ENST00000520267 IGLV5-39A0A0G2JS06 123 aa18.14■□□□□ 0.49
COL13A1-213ENST00000520267 X6R8D5 127 aa18.14■□□□□ 0.49
COL13A1-213ENST00000520267 NSD1Q96L73 2696 aaPredicted RBP18.14■□□□□ 0.49
COL13A1-213ENST00000520267 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.12■□□□□ 0.49
COL13A1-213ENST00000520267 NDUFA1O15239 70 aa18.12■□□□□ 0.49
COL13A1-213ENST00000520267 MIAQ16674 131 aa18.12■□□□□ 0.49
COL13A1-213ENST00000520267 SH2D6Q7Z4S9 175 aa18.12■□□□□ 0.49
COL13A1-213ENST00000520267 KIR2DL5BQ8NHK3 375 aa18.12■□□□□ 0.49
COL13A1-213ENST00000520267 SMIM1B2RUZ4 78 aa18.11■□□□□ 0.49
COL13A1-213ENST00000520267 LYRM7Q5U5X0 104 aa18.11■□□□□ 0.49
COL13A1-213ENST00000520267 VWFP04275 2813 aa18.11■□□□□ 0.49
COL13A1-213ENST00000520267 TCL1BO95988 128 aa18.11■□□□□ 0.49
COL13A1-213ENST00000520267 NPC2P61916 151 aa18.11■□□□□ 0.49
COL13A1-213ENST00000520267 ETDBQ3ZM63 59 aa18.11■□□□□ 0.49
COL13A1-213ENST00000520267 LINC00612Q8N6U2 182 aa18.11■□□□□ 0.49
COL13A1-213ENST00000520267 H7C2G1 150 aa18.1■□□□□ 0.49
COL13A1-213ENST00000520267 H7C423 109 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 478.8 ms