RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 hDV102S1A0JD36 115 aa8.58□□□□□ -1.04
VEGFA-219ENST00000518824 MT-ND4LP03901 98 aa8.58□□□□□ -1.04
VEGFA-219ENST00000518824 ZNF25P17030 456 aaPredicted RBP8.58□□□□□ -1.04
VEGFA-219ENST00000518824 FCER1GP30273 86 aa8.58□□□□□ -1.04
VEGFA-219ENST00000518824 RPL39P62891 51 aaKnown RBP8.58□□□□□ -1.04
VEGFA-219ENST00000518824 FOXI1Q12951 378 aa8.58□□□□□ -1.04
VEGFA-219ENST00000518824 FAM104AQ969W3 186 aa8.58□□□□□ -1.04
VEGFA-219ENST00000518824 UBE2D4Q9Y2X8 147 aa8.58□□□□□ -1.04
VEGFA-219ENST00000518824 F8W036 122 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 TCAPO15273 167 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 CCL25O15444 150 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 PPP1R17O96001 155 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 XCL1P47992 114 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 HIGD2BQ4VC39 106 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 UQCC3Q6UW78 93 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 Q6ZUT4 128 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 ATP5L2Q7Z4Y8 100 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 COMMD7Q86VX2 200 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 ZNF664Q8N3J9 261 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 TMEM101Q96IK0 257 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 BTF3L4Q96K17 158 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 C20orf78Q9BR46 151 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 SMIM2Q9BVW6 85 aa8.57□□□□□ -1.04
VEGFA-219ENST00000518824 S100A8P05109 93 aa8.56□□□□□ -1.04
VEGFA-219ENST00000518824 RPL32P62910 135 aaKnown RBP8.56□□□□□ -1.04
VEGFA-219ENST00000518824 TMEM136Q6ZRR5 245 aa8.56□□□□□ -1.04
VEGFA-219ENST00000518824 CIRBP-AS1Q8TBR5 109 aa8.56□□□□□ -1.04
VEGFA-219ENST00000518824 KIR2DL4Q99706 377 aa8.56□□□□□ -1.04
VEGFA-219ENST00000518824 OPRPNQ99935 248 aaPredicted RBP8.56□□□□□ -1.04
VEGFA-219ENST00000518824 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
VEGFA-219ENST00000518824 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.56□□□□□ -1.04
VEGFA-219ENST00000518824 DGAT2L7PQ6IED9 249 aa8.55□□□□□ -1.04
VEGFA-219ENST00000518824 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
VEGFA-219ENST00000518824 ORMDL3Q8N138 153 aa8.55□□□□□ -1.04
VEGFA-219ENST00000518824 CLRN3Q8NCR9 226 aa8.55□□□□□ -1.04
VEGFA-219ENST00000518824 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
VEGFA-219ENST00000518824 PRELID3AQ96N28 172 aa8.55□□□□□ -1.04
VEGFA-219ENST00000518824 CNBPP62633 177 aaKnown RBP8.54□□□□□ -1.04
VEGFA-219ENST00000518824 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
VEGFA-219ENST00000518824 LOC389332A0A1B0GUA5 103 aa8.53□□□□□ -1.04
VEGFA-219ENST00000518824 PHOX2AO14813 284 aa8.53□□□□□ -1.04
VEGFA-219ENST00000518824 PPBPP02775 128 aa8.53□□□□□ -1.04
VEGFA-219ENST00000518824 INAFM2P0DMQ5 153 aa8.53□□□□□ -1.04
VEGFA-219ENST00000518824 SEC11CQ9BY50 192 aa8.53□□□□□ -1.04
VEGFA-219ENST00000518824 CSDC2Q9Y534 153 aaKnown RBP8.53□□□□□ -1.04
VEGFA-219ENST00000518824 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
VEGFA-219ENST00000518824 CHTF8P0CG12 524 aa8.52□□□□□ -1.05
VEGFA-219ENST00000518824 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
VEGFA-219ENST00000518824 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
VEGFA-219ENST00000518824 SS18Q15532 418 aa8.51□□□□□ -1.05
VEGFA-219ENST00000518824 KIAA1644Q3SXP7 199 aa8.51□□□□□ -1.05
VEGFA-219ENST00000518824 C10orf91Q5T1B1 145 aa8.51□□□□□ -1.05
VEGFA-219ENST00000518824 TIMM21Q9BVV7 248 aa8.51□□□□□ -1.05
VEGFA-219ENST00000518824 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
VEGFA-219ENST00000518824 PRSS47A8MTI9 375 aa8.5□□□□□ -1.05
VEGFA-219ENST00000518824 KRTAP10-4P60372 401 aaPredicted RBP8.5□□□□□ -1.05
VEGFA-219ENST00000518824 CD164L2Q6UWJ8 174 aa8.5□□□□□ -1.05
VEGFA-219ENST00000518824 IMMP2LQ96T52 175 aa8.5□□□□□ -1.05
VEGFA-219ENST00000518824 AP5S1Q9NUS5 200 aa8.5□□□□□ -1.05
VEGFA-219ENST00000518824 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
VEGFA-219ENST00000518824 CFAP161Q6P656 301 aa8.49□□□□□ -1.05
VEGFA-219ENST00000518824 PRSS3P2Q8NHM4 247 aa8.49□□□□□ -1.05
VEGFA-219ENST00000518824 CTDSP1Q9GZU7 261 aa8.49□□□□□ -1.05
VEGFA-219ENST00000518824 IGHV3-64A0A075B6Q5 118 aa8.48□□□□□ -1.05
VEGFA-219ENST00000518824 ZC2HC1BQ5TFG8 222 aa8.48□□□□□ -1.05
VEGFA-219ENST00000518824 C5orf38Q86SI9 138 aa8.48□□□□□ -1.05
VEGFA-219ENST00000518824 TMEM18Q96B42 140 aa8.48□□□□□ -1.05
VEGFA-219ENST00000518824 MAP1LC3AQ9H492 121 aa8.48□□□□□ -1.05
VEGFA-219ENST00000518824 CARHSP1Q9Y2V2 147 aaKnown RBP8.48□□□□□ -1.05
VEGFA-219ENST00000518824 IGHV1-58A0A0C4DH39 117 aa8.47□□□□□ -1.05
VEGFA-219ENST00000518824 C1orf196B1AJZ1 125 aa8.47□□□□□ -1.05
VEGFA-219ENST00000518824 COX6A2Q02221 97 aa8.47□□□□□ -1.05
VEGFA-219ENST00000518824 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
VEGFA-219ENST00000518824 Q8N8P6 123 aa8.47□□□□□ -1.05
VEGFA-219ENST00000518824 IGLV4-3A0A075B6K6 122 aa8.46□□□□□ -1.06
VEGFA-219ENST00000518824 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.46□□□□□ -1.06
VEGFA-219ENST00000518824 RAB5AP20339 215 aa8.46□□□□□ -1.06
VEGFA-219ENST00000518824 IFI27P40305 119 aaPredicted RBP8.46□□□□□ -1.06
VEGFA-219ENST00000518824 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.06
VEGFA-219ENST00000518824 RPS10P5Q9NQ39 176 aa8.46□□□□□ -1.06
VEGFA-219ENST00000518824 SPANXA1Q9NS26 97 aa8.46□□□□□ -1.06
VEGFA-219ENST00000518824 LAMTOR2Q9Y2Q5 125 aa8.46□□□□□ -1.06
VEGFA-219ENST00000518824 SMAGPQ0VAQ4 97 aa8.45□□□□□ -1.06
VEGFA-219ENST00000518824 SPACA4Q8TDM5 124 aa8.45□□□□□ -1.06
VEGFA-219ENST00000518824 IGLV4-69A0A075B6H9 119 aa8.44□□□□□ -1.06
VEGFA-219ENST00000518824 A0A087WYN8 130 aa8.44□□□□□ -1.06
VEGFA-219ENST00000518824 A0A096LNI7 61 aa8.44□□□□□ -1.06
VEGFA-219ENST00000518824 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
VEGFA-219ENST00000518824 COX7A2LO14548 114 aa8.44□□□□□ -1.06
VEGFA-219ENST00000518824 TRAV9-1A0A075B6T8 112 aa8.43□□□□□ -1.06
VEGFA-219ENST00000518824 IGHV3OR16-9A0A0B4J2B5 98 aa8.43□□□□□ -1.06
VEGFA-219ENST00000518824 IFITM10A6NMD0 228 aa8.43□□□□□ -1.06
VEGFA-219ENST00000518824 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
VEGFA-219ENST00000518824 MALP21145 153 aa8.43□□□□□ -1.06
VEGFA-219ENST00000518824 HNRNPA3P51991 378 aaKnown RBP8.43□□□□□ -1.06
VEGFA-219ENST00000518824 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
VEGFA-219ENST00000518824 Q6ZRU5 148 aa8.43□□□□□ -1.06
VEGFA-219ENST00000518824 LINC00173Q6ZV60 143 aa8.43□□□□□ -1.06
VEGFA-219ENST00000518824 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms