RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 NWD2Q9ULI1 1742 aa-0.66□□□□□ -2.51
RNU2-56P-201ENST00000516826 USF3Q68DE3 2245 aa-0.66□□□□□ -2.51
RNU2-56P-201ENST00000516826 PIGBOS1A0A0B4J2F0 54 aa-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 RBM3P98179 157 aaKnown RBP-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 C12orf73Q69YU5 71 aa-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 TTC9CQ8N5M4 171 aa-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 TSTD1Q8NFU3 115 aa-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 TPT1P8Q9HAU6 139 aa-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 LINC01558Q9Y6Z2 57 aa-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 V9GYH0 126 aa-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 EP300Q09472 2414 aaPredicted RBP-0.66□□□□□ -2.52
RNU2-56P-201ENST00000516826 CEP152O94986 1710 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 GRIN2AQ12879 1464 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 ACANP16112 2415 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 MAP1BP46821 2468 aaKnown RBP-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 FXYD6-FXYD2A0A087WZ82 144 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 F8VRH5 84 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 HIST1H1DP16402 221 aaKnown RBP-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 TPPP2P59282 170 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 KRTAP19-8Q3LI54 63 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 BAGE2Q86Y30 109 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 LZICQ8WZA0 190 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 LSM10Q969L4 123 aaKnown RBP-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 NDUFA4L2Q9NRX3 87 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 ZNF236Q9UL36 1845 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 MYOM3Q5VTT5 1437 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 STAB2Q8WWQ8 2551 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 SHANK2Q9UPX8 1470 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 FAT1Q14517 4588 aa-0.67□□□□□ -2.52
RNU2-56P-201ENST00000516826 TRBV7-3A0A075B6L6 115 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 LOC105371267A0A1B0GV96 52 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 SPINK4O60575 86 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 SPRR2AP35326 72 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 CSPG4Q6UVK1 2322 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 MAFIPQ8WZ33 124 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 MGST2Q99735 147 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 SNRNP25Q9BV90 132 aaKnown RBP-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 RERGLQ9H628 205 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 SERP1Q9Y6X1 66 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 WNK1Q9H4A3 2382 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 CFTRP13569 1480 aa-0.68□□□□□ -2.52
RNU2-56P-201ENST00000516826 TULP4Q9NRJ4 1543 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 NBPF19A0A087WUL8 3843 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 GVINP1Q7Z2Y8 2422 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 IGLC7A0M8Q6 106 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 LOC730098B7Z3J9 87 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 M0R2T5 61 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 TNFP01375 233 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 APOC3P02656 99 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 KRTAP6-2Q3LI66 62 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 COPS9Q8WXC6 57 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 SPRR4Q96PI1 79 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 PAIP2BQ9ULR5 123 aaKnown RBP-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 GAPVD1Q14C86 1478 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 SPTBN1Q01082 2364 aaKnown RBP-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 RIMS1Q86UR5 1692 aaKnown RBP-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 CHD8Q9HCK8 2581 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 ARAP2Q8WZ64 1704 aa-0.69□□□□□ -2.52
RNU2-56P-201ENST00000516826 MYO7BQ6PIF6 2116 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 PLCE1Q9P212 2302 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 NSD3Q9BZ95 1437 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 HMGN4O00479 90 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 ARPC4P59998 168 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 BTG2P78543 158 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 TMEM263Q8WUH6 116 aaKnown RBP-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 PDCD10Q9BUL8 212 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 SPANXDQ9BXN6 97 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 DYNLRB1Q9NP97 96 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 KIF21AQ7Z4S6 1674 aa-0.7□□□□□ -2.52
RNU2-56P-201ENST00000516826 PATJQ8NI35 1801 aa-0.71□□□□□ -2.52
RNU2-56P-201ENST00000516826 RAPGEF6Q8TEU7 1601 aa-0.71□□□□□ -2.52
RNU2-56P-201ENST00000516826 DOCK1Q14185 1865 aa-0.71□□□□□ -2.52
RNU2-56P-201ENST00000516826 IQSEC2Q5JU85 1478 aa-0.71□□□□□ -2.52
RNU2-56P-201ENST00000516826 LOC285095A0A1B0GVY8 99 aa-0.71□□□□□ -2.52
RNU2-56P-201ENST00000516826 SELENOWP63302 87 aa-0.71□□□□□ -2.52
RNU2-56P-201ENST00000516826 PFDN5Q99471 154 aa-0.71□□□□□ -2.52
RNU2-56P-201ENST00000516826 TSC2P49815 1807 aa-0.72□□□□□ -2.52
RNU2-56P-201ENST00000516826 SBF2Q86WG5 1849 aa-0.72□□□□□ -2.52
RNU2-56P-201ENST00000516826 SFT2D2O95562 160 aa-0.72□□□□□ -2.52
RNU2-56P-201ENST00000516826 TSLPQ969D9 159 aa-0.72□□□□□ -2.52
RNU2-56P-201ENST00000516826 PPP3R2Q96LZ3 170 aa-0.72□□□□□ -2.52
RNU2-56P-201ENST00000516826 NAA60Q9H7X0 242 aa-0.72□□□□□ -2.52
RNU2-56P-201ENST00000516826 BICRAQ9NZM4 1560 aa-0.72□□□□□ -2.52
RNU2-56P-201ENST00000516826 SETD2Q9BYW2 2564 aaPredicted RBP-0.72□□□□□ -2.53
RNU2-56P-201ENST00000516826 POLA1P09884 1462 aaPredicted RBP-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 PCLOQ9Y6V0 5065 aa-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 TRBV7-4A0A0J9YYF1 115 aa-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 LINC00959A0A1B0GUT2 108 aa-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 SPRR2EP22531 72 aa-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 MEIG1Q5JSS6 88 aa-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 MRPL54Q6P161 138 aaKnown RBP-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 DEFB105AQ8NG35 78 aa-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 CDC42SE2Q9NRR3 84 aa-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 SPTA1P02549 2419 aa-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 CPSF1Q10570 1443 aaKnown RBP-0.73□□□□□ -2.53
RNU2-56P-201ENST00000516826 MXRA5Q9NR99 2828 aa-0.74□□□□□ -2.53
RNU2-56P-201ENST00000516826 SSSCA1O60232 199 aa-0.74□□□□□ -2.53
RNU2-56P-201ENST00000516826 MGPP08493 103 aa-0.74□□□□□ -2.53
RNU2-56P-201ENST00000516826 Q56UQ5 140 aa-0.74□□□□□ -2.53
RNU2-56P-201ENST00000516826 C10orf113Q5VZT2 155 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms