RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 CBLN2Q8IUK8 224 aa1.5□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ORMDL3Q8N138 153 aa1.5□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ATP6V0E2Q8NHE4 81 aa1.5□□□□□ -2.17
SCARNA16.3-201ENST00000516595 LYSTQ99698 3801 aa1.5□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TMEM70Q9BUB7 260 aa1.5□□□□□ -2.17
SCARNA16.3-201ENST00000516595 SMIM2Q9BVW6 85 aa1.5□□□□□ -2.17
SCARNA16.3-201ENST00000516595 URGCP-MRPS24S4R325 110 aa1.5□□□□□ -2.17
SCARNA16.3-201ENST00000516595 NACAE9PAV3 2078 aa1.5□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TGP01266 2768 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 KMT2AQ03164 3969 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 KMT2CQ8NEZ4 4911 aaKnown RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 IGLV2-18A0A075B6J9 118 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TRBV25-1A0A075B6N4 114 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TRBV6-8A0A0A6YYG3 113 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TGIF2-C20orf24A0A0A6YYL0 155 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TRAV26-2A0A0B4J265 109 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 IGHV1-24A0A0C4DH33 117 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 IGHV3-38A0A0C4DH36 116 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 A0A0J9YY99 117 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 LOC100131303A0A0U1RQF7 123 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 LCE6AA0A183 80 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 LINC01546A6NGU7 62 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 COLCA2A8K830 154 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 KRTAP29-1A8MX34 341 aaPredicted RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 I3L3M4 83 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 CDK2AP2O75956 126 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 NPYP01303 97 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 APCSP02743 223 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ESDP10768 282 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ZNF25P17030 456 aaPredicted RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 RAB5AP20339 215 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 PMCHP20382 165 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 G0S2P27469 103 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 CKS2P33552 79 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 RPS10P46783 165 aaKnown RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 SMAGPQ0VAQ4 97 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 LAGE3Q14657 143 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ESRGQ1W209 222 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ORMDL2Q53FV1 153 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ZFAND6Q6FIF0 208 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 LYPD5Q6UWN5 251 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 NTM-AS1Q6ZSK4 140 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 SMIM29Q86T20 159 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 MRPL52Q86TS9 123 aaKnown RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 NIT1Q86X76 327 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 C10orf126Q8N4M7 172 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 Q8N8P6 123 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ZNRF2Q8NHG8 242 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 PRELID3AQ96N28 172 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 C12orf57Q99622 126 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 KIR2DL4Q99706 377 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ALKBH7Q9BT30 221 aaPredicted RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 MAP1LC3AQ9H492 121 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 ST20Q9HBF5 79 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 NXT2Q9NPJ8 142 aaKnown RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 LINC00588Q9Y4M8 146 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 CSDC2Q9Y534 153 aaKnown RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TRAPPC1Q9Y5R8 145 aa1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 DYNC2H1Q8NCM8 4307 aaKnown RBP1.49□□□□□ -2.17
SCARNA16.3-201ENST00000516595 PLECQ15149 4684 aaKnown RBP1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TRAV9-2A0A087WT02 112 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TRAV8-6A0A0B4J262 113 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 NBDYA0A0U1RRE5 68 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 SMKR1H3BMG3 65 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 SIVA1O15304 175 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 CCL25O15444 150 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 GAS8-AS1O95177 125 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 RAB5BP61020 215 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 MRPS36P82909 103 aaKnown RBP1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 Q0VG73 95 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 FABP9Q0Z7S8 132 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 COA6Q5JTJ3 125 aaKnown RBP1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 Q6ZR54 194 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 WFDC10BQ8IUB3 73 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 UBE2DNLQ8IWF7 75 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 C20orf203Q8NBC4 194 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 C18orf32Q8TCD1 76 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 CHCHD1Q96BP2 118 aaKnown RBP1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 RPL39LQ96EH5 51 aaKnown RBP1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 PRAC1Q96KF2 57 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 PACRGQ96M98 296 aaPredicted RBP1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TIMM17AQ99595 171 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TMEM243Q9BU79 118 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TIMM21Q9BVV7 248 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 Q9H8V8 135 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 SPANXA1Q9NS26 97 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 PRR34Q9NV39 138 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 Q9UF83 564 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 PYGO1Q9Y3Y4 419 aa1.48□□□□□ -2.17
SCARNA16.3-201ENST00000516595 RYR2Q92736 4967 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 A0A087WX48 190 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TRAV8-3A0A0A6YYJ7 113 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 TRAV8-4A0A0B4J246 113 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 A0A1B0GV90 55 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 IGIPA6NJ69 53 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 IBA57-AS1B1ANH7 110 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 UBE2L6O14933 153 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 SCO1O75880 301 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 LY6G6CO95867 125 aa1.47□□□□□ -2.17
SCARNA16.3-201ENST00000516595 HBDP02042 147 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms