RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 A8MZ25 164 aa9.94□□□□□ -0.82
TCOF1-214ENST00000515035 CHCHD10Q8WYQ3 142 aaPredicted RBP9.94□□□□□ -0.82
TCOF1-214ENST00000515035 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
TCOF1-214ENST00000515035 FAM222AQ5U5X8 452 aa9.93□□□□□ -0.82
TCOF1-214ENST00000515035 C4orf3Q8WVX3 66 aa9.93□□□□□ -0.82
TCOF1-214ENST00000515035 C20orf173Q96LM9 149 aa9.93□□□□□ -0.82
TCOF1-214ENST00000515035 A0A096LNI7 61 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 IGLV2-11P01706 119 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 Q6ZS46 218 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 B9D2Q9BPU9 175 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 NAV3Q8IVL0 2385 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 HRCT1Q6UXD1 115 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 CASC2Q6XLA1 102 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 WFDC10BQ8IUB3 73 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 C1orf158Q8N1D5 194 aa9.92□□□□□ -0.82
TCOF1-214ENST00000515035 IGKV2-24A0A0C4DH68 120 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 A6NDX4 124 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 A6NED7 52 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 K7EQG2 157 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 Q6Q795 121 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 NRACQ8N912 160 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 H7C423 109 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 XAGE1AQ9HD64 81 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 C3orf84H3BNL1 204 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 LINC00310P59036 64 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 PRR4Q16378 134 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 KIAA1549LQ6ZVL6 1849 aa9.91□□□□□ -0.82
TCOF1-214ENST00000515035 C19orf84I3L1E1 186 aa9.9□□□□□ -0.82
TCOF1-214ENST00000515035 ZNF843Q8N446 348 aa9.9□□□□□ -0.82
TCOF1-214ENST00000515035 SMIM26A0A096LP01 95 aa9.9□□□□□ -0.83
TCOF1-214ENST00000515035 TRBV6-5A0A0K0K1A5 114 aa9.9□□□□□ -0.83
TCOF1-214ENST00000515035 ODF3BA8MYP8 253 aa9.9□□□□□ -0.83
TCOF1-214ENST00000515035 Q6ZQY7 126 aa9.9□□□□□ -0.83
TCOF1-214ENST00000515035 TNFRSF13BO14836 293 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-214ENST00000515035 PCNX3Q9H6A9 2034 aa9.89□□□□□ -0.83
TCOF1-214ENST00000515035 ZFAND3Q9H8U3 227 aa9.89□□□□□ -0.83
TCOF1-214ENST00000515035 SMAD5-AS1Q9Y6J3 95 aa9.89□□□□□ -0.83
TCOF1-214ENST00000515035 LMO4P61968 165 aa9.89□□□□□ -0.83
TCOF1-214ENST00000515035 MYO9AB2RTY4 2548 aa9.88□□□□□ -0.83
TCOF1-214ENST00000515035 Q8N976 141 aa9.88□□□□□ -0.83
TCOF1-214ENST00000515035 DCANP1Q8TF63 244 aa9.88□□□□□ -0.83
TCOF1-214ENST00000515035 NCOR2Q9Y618 2525 aa9.88□□□□□ -0.83
TCOF1-214ENST00000515035 SMIM9A6NGZ8 99 aa9.88□□□□□ -0.83
TCOF1-214ENST00000515035 PROK1P58294 105 aa9.88□□□□□ -0.83
TCOF1-214ENST00000515035 Q6JHZ5 121 aa9.87□□□□□ -0.83
TCOF1-214ENST00000515035 TANC2Q9HCD6 1990 aa9.87□□□□□ -0.83
TCOF1-214ENST00000515035 ARHGAP32A7KAX9 2087 aa9.87□□□□□ -0.83
TCOF1-214ENST00000515035 TSHBP01222 138 aa9.87□□□□□ -0.83
TCOF1-214ENST00000515035 K7ERS5 55 aa9.87□□□□□ -0.83
TCOF1-214ENST00000515035 GAS8-AS1O95177 125 aa9.86□□□□□ -0.83
TCOF1-214ENST00000515035 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
TCOF1-214ENST00000515035 TRBV6-8A0A0A6YYG3 113 aa9.86□□□□□ -0.83
TCOF1-214ENST00000515035 DNAJC9-AS1A6NH13 148 aa9.86□□□□□ -0.83
TCOF1-214ENST00000515035 SMIM11BQ8TCY0 68 aa9.86□□□□□ -0.83
TCOF1-214ENST00000515035 A0A0J9YWU9 116 aa9.85□□□□□ -0.83
TCOF1-214ENST00000515035 FSTL3O95633 263 aa9.85□□□□□ -0.83
TCOF1-214ENST00000515035 WFDC13Q8IUB5 93 aa9.85□□□□□ -0.83
TCOF1-214ENST00000515035 PRR15LQ9BU68 103 aa9.85□□□□□ -0.83
TCOF1-214ENST00000515035 POLR2KP53803 58 aaKnown RBP9.85□□□□□ -0.83
TCOF1-214ENST00000515035 C11orf21Q9P2W6 132 aa9.85□□□□□ -0.83
TCOF1-214ENST00000515035 RNASE3P12724 160 aaKnown RBP9.84□□□□□ -0.83
TCOF1-214ENST00000515035 TMEM131Q92545 1883 aa9.84□□□□□ -0.83
TCOF1-214ENST00000515035 IGHV4-31P0DP07 118 aa9.84□□□□□ -0.83
TCOF1-214ENST00000515035 MIFP14174 115 aa9.83□□□□□ -0.84
TCOF1-214ENST00000515035 MRPS36P82909 103 aaKnown RBP9.83□□□□□ -0.84
TCOF1-214ENST00000515035 LINC00526Q96FQ7 95 aa9.83□□□□□ -0.84
TCOF1-214ENST00000515035 KIAA1549Q9HCM3 1950 aa9.83□□□□□ -0.84
TCOF1-214ENST00000515035 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
TCOF1-214ENST00000515035 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
TCOF1-214ENST00000515035 PCDH15Q96QU1 1955 aa9.82□□□□□ -0.84
TCOF1-214ENST00000515035 TRBV6-4A0A1B0GX49 114 aa9.82□□□□□ -0.84
TCOF1-214ENST00000515035 SERP1Q9Y6X1 66 aa9.82□□□□□ -0.84
TCOF1-214ENST00000515035 ABCA2Q9BZC7 2435 aa9.81□□□□□ -0.84
TCOF1-214ENST00000515035 DEFB114Q30KQ6 69 aa9.81□□□□□ -0.84
TCOF1-214ENST00000515035 HIVEP3Q5T1R4 2406 aa9.81□□□□□ -0.84
TCOF1-214ENST00000515035 LYRM9A8MSI8 78 aa9.81□□□□□ -0.84
TCOF1-214ENST00000515035 PRR9Q5T870 116 aa9.81□□□□□ -0.84
TCOF1-214ENST00000515035 UBE2D4Q9Y2X8 147 aa9.81□□□□□ -0.84
TCOF1-214ENST00000515035 Q8N9L7 120 aa9.81□□□□□ -0.84
TCOF1-214ENST00000515035 C9orf85Q96MD7 179 aa9.81□□□□□ -0.84
TCOF1-214ENST00000515035 A0A087WVE0 104 aa9.8□□□□□ -0.84
TCOF1-214ENST00000515035 CCDC168Q8NDH2 2452 aa9.8□□□□□ -0.84
TCOF1-214ENST00000515035 TRAV7A0A075B6U4 112 aa9.8□□□□□ -0.84
TCOF1-214ENST00000515035 SOSTDC1Q6X4U4 206 aa9.8□□□□□ -0.84
TCOF1-214ENST00000515035 UBE2D1P51668 147 aa9.8□□□□□ -0.84
TCOF1-214ENST00000515035 EBI3Q14213 229 aa9.8□□□□□ -0.84
TCOF1-214ENST00000515035 CRIP2P52943 208 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-214ENST00000515035 C22orf34Q6ZV56 151 aa9.79□□□□□ -0.84
TCOF1-214ENST00000515035 Q6YL49 198 aa9.79□□□□□ -0.84
TCOF1-214ENST00000515035 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
TCOF1-214ENST00000515035 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
TCOF1-214ENST00000515035 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
TCOF1-214ENST00000515035 C14orf177Q52M58 125 aa9.79□□□□□ -0.84
TCOF1-214ENST00000515035 FAM19A5Q7Z5A7 132 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-214ENST00000515035 NAV2Q8IVL1 2488 aa9.79□□□□□ -0.84
TCOF1-214ENST00000515035 SYCNQ0VAF6 134 aa9.79□□□□□ -0.84
TCOF1-214ENST00000515035 HCFC1P51610 2035 aa9.78□□□□□ -0.84
TCOF1-214ENST00000515035 A0A087WZ39 114 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms