RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 EPG5Q9HCE0 2579 aa12.56□□□□□ -0.4
SNX2-213ENST00000514949 CMC4P56277 68 aaPredicted RBP12.56□□□□□ -0.4
SNX2-213ENST00000514949 CDIP1Q9H305 208 aa12.56□□□□□ -0.4
SNX2-213ENST00000514949 CDKN2A-AS1Q9UH64 79 aa12.56□□□□□ -0.4
SNX2-213ENST00000514949 IGHV3OR16-12A0A075B7B8 117 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 NDUFA1O15239 70 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 IFITM1P13164 125 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 SMAGPQ0VAQ4 97 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 DAZ2Q13117 558 aaKnown RBP12.55□□□□□ -0.4
SNX2-213ENST00000514949 HIST2H2BDQ6DRA6 164 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
SNX2-213ENST00000514949 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
SNX2-213ENST00000514949 YAE1D1Q9NRH1 226 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 IGLV5-39A0A0G2JS06 123 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 SLC25A20O43772 301 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 ESM1Q9NQ30 184 aa12.55□□□□□ -0.4
SNX2-213ENST00000514949 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
SNX2-213ENST00000514949 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
SNX2-213ENST00000514949 PRSS2P07478 247 aa12.54□□□□□ -0.4
SNX2-213ENST00000514949 HERVK_113P63121 156 aa12.54□□□□□ -0.4
SNX2-213ENST00000514949 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
SNX2-213ENST00000514949 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.54□□□□□ -0.4
SNX2-213ENST00000514949 A8MZ25 164 aa12.53□□□□□ -0.4
SNX2-213ENST00000514949 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
SNX2-213ENST00000514949 ATXN8Q156A1 80 aa12.53□□□□□ -0.4
SNX2-213ENST00000514949 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
SNX2-213ENST00000514949 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
SNX2-213ENST00000514949 TMEM101Q96IK0 257 aa12.53□□□□□ -0.4
SNX2-213ENST00000514949 FAM110AQ9BQ89 295 aa12.53□□□□□ -0.4
SNX2-213ENST00000514949 K7EQD1 137 aa12.53□□□□□ -0.4
SNX2-213ENST00000514949 ANKRD29Q8N6D5 301 aa12.53□□□□□ -0.4
SNX2-213ENST00000514949 LINC00242Q5T6M2 205 aa12.52□□□□□ -0.4
SNX2-213ENST00000514949 C16orf95Q9H693 158 aa12.52□□□□□ -0.4
SNX2-213ENST00000514949 C9JAW5 83 aa12.52□□□□□ -0.41
SNX2-213ENST00000514949 H7C2G1 150 aa12.51□□□□□ -0.41
SNX2-213ENST00000514949 TRIAP1O43715 76 aa12.51□□□□□ -0.41
SNX2-213ENST00000514949 GIG44P09565 113 aaPredicted RBP12.51□□□□□ -0.41
SNX2-213ENST00000514949 Q1RN00 199 aa12.51□□□□□ -0.41
SNX2-213ENST00000514949 Q6ZTI0 123 aa12.51□□□□□ -0.41
SNX2-213ENST00000514949 NF1P21359 2839 aa12.51□□□□□ -0.41
SNX2-213ENST00000514949 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
SNX2-213ENST00000514949 COX6A2Q02221 97 aa12.5□□□□□ -0.41
SNX2-213ENST00000514949 LINC01620Q4KN68 170 aa12.5□□□□□ -0.41
SNX2-213ENST00000514949 NTM-AS1Q6ZSK4 140 aa12.5□□□□□ -0.41
SNX2-213ENST00000514949 CITED2Q99967 270 aaPredicted RBP12.5□□□□□ -0.41
SNX2-213ENST00000514949 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
SNX2-213ENST00000514949 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
SNX2-213ENST00000514949 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
SNX2-213ENST00000514949 ICOSQ9Y6W8 199 aa12.49□□□□□ -0.41
SNX2-213ENST00000514949 CIDEAO60543 219 aa12.49□□□□□ -0.41
SNX2-213ENST00000514949 WNK1Q9H4A3 2382 aa12.48□□□□□ -0.41
SNX2-213ENST00000514949 RNASE1P07998 156 aaKnown RBP12.48□□□□□ -0.41
SNX2-213ENST00000514949 CIRBPQ14011 172 aaKnown RBP12.48□□□□□ -0.41
SNX2-213ENST00000514949 LINC01006Q8NI28 216 aa12.48□□□□□ -0.41
SNX2-213ENST00000514949 CDC42SE2Q9NRR3 84 aa12.48□□□□□ -0.41
SNX2-213ENST00000514949 PLAC8L1A1L4L8 177 aa12.47□□□□□ -0.41
SNX2-213ENST00000514949 TRBV10-2A0A0K0K1G8 114 aa12.47□□□□□ -0.41
SNX2-213ENST00000514949 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
SNX2-213ENST00000514949 KRTAP1-1Q07627 177 aa12.47□□□□□ -0.41
SNX2-213ENST00000514949 C16orf74Q96GX8 76 aa12.47□□□□□ -0.41
SNX2-213ENST00000514949 C19orf73Q9NVV2 129 aa12.47□□□□□ -0.41
SNX2-213ENST00000514949 SMIM1B2RUZ4 78 aa12.46□□□□□ -0.41
SNX2-213ENST00000514949 IGLV1-51P01701 117 aa12.46□□□□□ -0.41
SNX2-213ENST00000514949 COX6CP09669 75 aa12.46□□□□□ -0.41
SNX2-213ENST00000514949 FLNAP21333 2647 aaKnown RBP12.46□□□□□ -0.42
SNX2-213ENST00000514949 RPL13AP40429 203 aaKnown RBP12.46□□□□□ -0.42
SNX2-213ENST00000514949 OVOL2Q9BRP0 275 aa12.46□□□□□ -0.42
SNX2-213ENST00000514949 PPDPFQ9H3Y8 114 aa12.46□□□□□ -0.42
SNX2-213ENST00000514949 H7C423 109 aa12.45□□□□□ -0.42
SNX2-213ENST00000514949 NOP10Q9NPE3 64 aaKnown RBP12.45□□□□□ -0.42
SNX2-213ENST00000514949 NBPF19A0A087WUL8 3843 aa12.44□□□□□ -0.42
SNX2-213ENST00000514949 F5H768 121 aa12.44□□□□□ -0.42
SNX2-213ENST00000514949 Q9H8V8 135 aa12.44□□□□□ -0.42
SNX2-213ENST00000514949 TRBV6-4A0A1B0GX49 114 aa12.44□□□□□ -0.42
SNX2-213ENST00000514949 CSNK1G2-AS1Q8NCQ2 148 aa12.44□□□□□ -0.42
SNX2-213ENST00000514949 COPS9Q8WXC6 57 aa12.44□□□□□ -0.42
SNX2-213ENST00000514949 LINC00308Q8TCZ7 52 aa12.43□□□□□ -0.42
SNX2-213ENST00000514949 ZNF625Q96I27 306 aaPredicted RBP12.43□□□□□ -0.42
SNX2-213ENST00000514949 ANK3Q12955 4377 aaKnown RBP12.43□□□□□ -0.42
SNX2-213ENST00000514949 GAGE12JA6NER3 117 aa12.43□□□□□ -0.42
SNX2-213ENST00000514949 XGP55808 180 aa12.43□□□□□ -0.42
SNX2-213ENST00000514949 GAGE4Q13068 117 aa12.43□□□□□ -0.42
SNX2-213ENST00000514949 GAGE5Q13069 117 aa12.43□□□□□ -0.42
SNX2-213ENST00000514949 NDUFA7O95182 113 aa12.42□□□□□ -0.42
SNX2-213ENST00000514949 TMEM243Q9BU79 118 aa12.42□□□□□ -0.42
SNX2-213ENST00000514949 SETXQ7Z333 2677 aaKnown RBP12.42□□□□□ -0.42
SNX2-213ENST00000514949 H3BT86 120 aa12.41□□□□□ -0.42
SNX2-213ENST00000514949 LST1O00453 97 aa12.41□□□□□ -0.42
SNX2-213ENST00000514949 CCDC168Q8NDH2 2452 aa12.41□□□□□ -0.42
SNX2-213ENST00000514949 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
SNX2-213ENST00000514949 MT-ATP8P03928 68 aa12.41□□□□□ -0.42
SNX2-213ENST00000514949 NPC2P61916 151 aa12.41□□□□□ -0.42
SNX2-213ENST00000514949 HERV-K104P63124 156 aa12.41□□□□□ -0.42
SNX2-213ENST00000514949 NTN5Q8WTR8 489 aaPredicted RBP12.41□□□□□ -0.42
SNX2-213ENST00000514949 DAND5Q8N907 189 aa12.4□□□□□ -0.42
SNX2-213ENST00000514949 PDZD2O15018 2839 aa12.39□□□□□ -0.43
SNX2-213ENST00000514949 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.43
SNX2-213ENST00000514949 TRGV2A0A075B6R0 118 aa12.38□□□□□ -0.43
SNX2-213ENST00000514949 A0A1B0GV72 72 aa12.38□□□□□ -0.43
SNX2-213ENST00000514949 UBE2L6O14933 153 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms