RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 ALKAL2Q6UX46 152 aa15.04■□□□□ -0
CCND3-221ENST00000514588 BORCS7Q96B45 105 aa15.04■□□□□ -0
CCND3-221ENST00000514588 LINC01600Q96MT4 127 aa15.04■□□□□ -0
CCND3-221ENST00000514588 LINC00474Q9P2X8 69 aa15.04■□□□□ -0
CCND3-221ENST00000514588 POLR2KP53803 58 aaKnown RBP15.03■□□□□ -0
CCND3-221ENST00000514588 MRPL52Q86TS9 123 aaKnown RBP15.03■□□□□ -0
CCND3-221ENST00000514588 FAM210AQ96ND0 272 aa15.03■□□□□ -0
CCND3-221ENST00000514588 TMEM191AQ9H0A3 160 aa15.03■□□□□ -0
CCND3-221ENST00000514588 CDC42SE2Q9NRR3 84 aa15.03■□□□□ -0
CCND3-221ENST00000514588 A0A1B0GUT8 65 aa15.02■□□□□ -0
CCND3-221ENST00000514588 CARD19Q96LW7 228 aa15.02■□□□□ -0
CCND3-221ENST00000514588 TRBV27A0A0K0K1C4 114 aa15.01□□□□□ -0.01
CCND3-221ENST00000514588 HIGD1CA8MV81 97 aa15.01□□□□□ -0.01
CCND3-221ENST00000514588 SS18Q15532 418 aa15.01□□□□□ -0.01
CCND3-221ENST00000514588 CD164L2Q6UWJ8 174 aa15.01□□□□□ -0.01
CCND3-221ENST00000514588 TSKUQ8WUA8 353 aa15.01□□□□□ -0.01
CCND3-221ENST00000514588 PKIGQ9Y2B9 76 aa15.01□□□□□ -0.01
CCND3-221ENST00000514588 RAB4AP20338 218 aa15□□□□□ -0.01
CCND3-221ENST00000514588 LINC01551Q86U37 167 aa15□□□□□ -0.01
CCND3-221ENST00000514588 ZNF664Q8N3J9 261 aa15□□□□□ -0.01
CCND3-221ENST00000514588 SMIM7Q9BQ49 75 aa14.99□□□□□ -0.01
CCND3-221ENST00000514588 C7orf77A4D0Y5 90 aa14.98□□□□□ -0.01
CCND3-221ENST00000514588 SYCNQ0VAF6 134 aa14.98□□□□□ -0.01
CCND3-221ENST00000514588 AMN1Q8IY45 258 aa14.98□□□□□ -0.01
CCND3-221ENST00000514588 ZNF561-AS1K7EIQ3 104 aa14.97□□□□□ -0.01
CCND3-221ENST00000514588 OSTCQ9NRP0 149 aa14.97□□□□□ -0.01
CCND3-221ENST00000514588 ODF1Q14990 250 aa14.96□□□□□ -0.01
CCND3-221ENST00000514588 SMKR1H3BMG3 65 aa14.95□□□□□ -0.02
CCND3-221ENST00000514588 CAMPP49913 170 aa14.95□□□□□ -0.02
CCND3-221ENST00000514588 SPINK6Q6UWN8 80 aa14.95□□□□□ -0.02
CCND3-221ENST00000514588 AKAP14Q86UN6 197 aa14.95□□□□□ -0.02
CCND3-221ENST00000514588 EIF5A2Q9GZV4 153 aaKnown RBP14.95□□□□□ -0.02
CCND3-221ENST00000514588 LRP2P98164 4655 aa14.95□□□□□ -0.02
CCND3-221ENST00000514588 A0A0J9YXV3 536 aa14.94□□□□□ -0.02
CCND3-221ENST00000514588 IGLV4-69A0A075B6H9 119 aa14.93□□□□□ -0.02
CCND3-221ENST00000514588 ZNF727A8MUV8 499 aa14.93□□□□□ -0.02
CCND3-221ENST00000514588 VCYO14598 125 aa14.93□□□□□ -0.02
CCND3-221ENST00000514588 FCER1GP30273 86 aa14.93□□□□□ -0.02
CCND3-221ENST00000514588 PTTG1IPP53801 180 aa14.93□□□□□ -0.02
CCND3-221ENST00000514588 C1orf196B1AJZ1 125 aa14.92□□□□□ -0.02
CCND3-221ENST00000514588 SRSF9Q13242 221 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCND3-221ENST00000514588 Q6ZRP5 223 aa14.92□□□□□ -0.02
CCND3-221ENST00000514588 NRACQ8N912 160 aa14.92□□□□□ -0.02
CCND3-221ENST00000514588 V9GYV3 84 aa14.92□□□□□ -0.02
CCND3-221ENST00000514588 COX7A2LO14548 114 aa14.91□□□□□ -0.02
CCND3-221ENST00000514588 MALP21145 153 aa14.91□□□□□ -0.02
CCND3-221ENST00000514588 KRTAP10-8P60410 259 aa14.91□□□□□ -0.02
CCND3-221ENST00000514588 RIGQ13278 110 aa14.91□□□□□ -0.02
CCND3-221ENST00000514588 REG3GQ6UW15 175 aa14.91□□□□□ -0.02
CCND3-221ENST00000514588 NUP35Q8NFH5 326 aa14.91□□□□□ -0.02
CCND3-221ENST00000514588 UBE2D4Q9Y2X8 147 aa14.91□□□□□ -0.02
CCND3-221ENST00000514588 CSDC2Q9Y534 153 aaKnown RBP14.91□□□□□ -0.02
CCND3-221ENST00000514588 LOC107984640A0A0U1RRK4 108 aa14.9□□□□□ -0.02
CCND3-221ENST00000514588 SRP19P09132 144 aaKnown RBP14.9□□□□□ -0.02
CCND3-221ENST00000514588 SUMO2P61956 95 aaKnown RBP14.9□□□□□ -0.02
CCND3-221ENST00000514588 GAGE2BQ13066 116 aa14.9□□□□□ -0.02
CCND3-221ENST00000514588 RNASE13Q5GAN3 156 aaKnown RBP14.9□□□□□ -0.02
CCND3-221ENST00000514588 ISOC2Q96AB3 205 aa14.9□□□□□ -0.02
CCND3-221ENST00000514588 PPP1R17O96001 155 aa14.89□□□□□ -0.03
CCND3-221ENST00000514588 TRAV13-1A0A0B4J241 112 aa14.87□□□□□ -0.03
CCND3-221ENST00000514588 A0A1W2PNN7 141 aa14.87□□□□□ -0.03
CCND3-221ENST00000514588 SMAGPQ0VAQ4 97 aa14.87□□□□□ -0.03
CCND3-221ENST00000514588 KIR2DL4Q99706 377 aa14.87□□□□□ -0.03
CCND3-221ENST00000514588 CAMK2N2Q96S95 79 aa14.86□□□□□ -0.03
CCND3-221ENST00000514588 hCG_2014768A0A024R1R8 64 aa14.85□□□□□ -0.03
CCND3-221ENST00000514588 APOMO95445 188 aa14.85□□□□□ -0.03
CCND3-221ENST00000514588 Q6ZUT4 128 aa14.85□□□□□ -0.03
CCND3-221ENST00000514588 C2orf48Q96LS8 159 aa14.85□□□□□ -0.03
CCND3-221ENST00000514588 NAT8BQ9UHF3 227 aa14.85□□□□□ -0.03
CCND3-221ENST00000514588 MRPL51Q4U2R6 128 aaKnown RBP14.84□□□□□ -0.03
CCND3-221ENST00000514588 FAM104BQ5XKR9 115 aa14.84□□□□□ -0.03
CCND3-221ENST00000514588 C5orf38Q86SI9 138 aa14.84□□□□□ -0.03
CCND3-221ENST00000514588 TIMM21Q9BVV7 248 aa14.84□□□□□ -0.03
CCND3-221ENST00000514588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.83□□□□□ -0.04
CCND3-221ENST00000514588 PPP1R2P9O14990 202 aa14.83□□□□□ -0.04
CCND3-221ENST00000514588 TMEM241Q24JQ0 296 aa14.82□□□□□ -0.04
CCND3-221ENST00000514588 RPL23P62829 140 aaKnown RBP14.81□□□□□ -0.04
CCND3-221ENST00000514588 C9orf116Q5BN46 136 aaPredicted RBP14.81□□□□□ -0.04
CCND3-221ENST00000514588 FAM74A3Q4VXF1 159 aa14.8□□□□□ -0.04
CCND3-221ENST00000514588 TMEM18Q96B42 140 aa14.8□□□□□ -0.04
CCND3-221ENST00000514588 C20orf78Q9BR46 151 aa14.8□□□□□ -0.04
CCND3-221ENST00000514588 TRBV24-1A0A075B6N3 115 aa14.79□□□□□ -0.04
CCND3-221ENST00000514588 SMIM27A0A1W2PRY6 76 aa14.79□□□□□ -0.04
CCND3-221ENST00000514588 LINC00862A6NCI5 91 aa14.79□□□□□ -0.04
CCND3-221ENST00000514588 RPL18AQ02543 176 aaKnown RBP14.79□□□□□ -0.04
CCND3-221ENST00000514588 SPAG11BQ08648 103 aa14.79□□□□□ -0.04
CCND3-221ENST00000514588 FAM104AQ969W3 186 aa14.79□□□□□ -0.04
CCND3-221ENST00000514588 OPRPNQ99935 248 aaPredicted RBP14.79□□□□□ -0.04
CCND3-221ENST00000514588 PSORS1C2Q9UIG4 136 aa14.79□□□□□ -0.04
CCND3-221ENST00000514588 RNF213Q63HN8 5207 aa14.78□□□□□ -0.04
CCND3-221ENST00000514588 RPL39P62891 51 aaKnown RBP14.78□□□□□ -0.04
CCND3-221ENST00000514588 RPL32P62910 135 aaKnown RBP14.78□□□□□ -0.04
CCND3-221ENST00000514588 ADIRFQ15847 76 aa14.78□□□□□ -0.04
CCND3-221ENST00000514588 C9JQL5 133 aa14.76□□□□□ -0.05
CCND3-221ENST00000514588 CKS2P33552 79 aa14.76□□□□□ -0.05
CCND3-221ENST00000514588 RNF151Q2KHN1 245 aa14.76□□□□□ -0.05
CCND3-221ENST00000514588 OR10D4PQ8NGN7 298 aa14.76□□□□□ -0.05
CCND3-221ENST00000514588 TNFRSF6BO95407 300 aa14.75□□□□□ -0.05
CCND3-221ENST00000514588 MT-ND6P03923 174 aa14.75□□□□□ -0.05
CCND3-221ENST00000514588 PHF5AQ7RTV0 110 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms