RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
NEDD9-214ENST00000513989 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 HBDP02042 147 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 ANGP03950 147 aaKnown RBP6.91□□□□□ -1.3
NEDD9-214ENST00000513989 S100A6P06703 90 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 NPSP0C0P6 89 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 IGHV3-30-3P0DP02 117 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-214ENST00000513989 C2orf66Q6UXQ4 117 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 MRPL52Q86TS9 123 aaKnown RBP6.91□□□□□ -1.3
NEDD9-214ENST00000513989 TOMM6Q96B49 74 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 SCGB3A1Q96QR1 104 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 PYGO1Q9Y3Y4 419 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 RYR1P21817 5038 aa6.91□□□□□ -1.3
NEDD9-214ENST00000513989 TRAV8-3A0A0A6YYJ7 113 aa6.9□□□□□ -1.3
NEDD9-214ENST00000513989 NBDYA0A0U1RRE5 68 aa6.9□□□□□ -1.3
NEDD9-214ENST00000513989 CRPP02741 224 aa6.9□□□□□ -1.3
NEDD9-214ENST00000513989 NDUFA6P56556 154 aa6.9□□□□□ -1.3
NEDD9-214ENST00000513989 RPL39P62891 51 aaKnown RBP6.9□□□□□ -1.3
NEDD9-214ENST00000513989 Q6ZN92 141 aa6.9□□□□□ -1.3
NEDD9-214ENST00000513989 ERASQ7Z444 233 aa6.9□□□□□ -1.3
NEDD9-214ENST00000513989 ZNF664Q8N3J9 261 aa6.9□□□□□ -1.3
NEDD9-214ENST00000513989 UBE2D4Q9Y2X8 147 aa6.9□□□□□ -1.3
NEDD9-214ENST00000513989 PKD1P98161 4303 aa6.9□□□□□ -1.31
NEDD9-214ENST00000513989 IBA57-AS1B1ANH7 110 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 SERF1AO75920 110 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 ATP5LO75964 103 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 MRPS36P82909 103 aaKnown RBP6.89□□□□□ -1.31
NEDD9-214ENST00000513989 MPV17L2Q567V2 206 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 Q8N976 141 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 RMI2Q96E14 147 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 VCX2Q9H322 139 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
NEDD9-214ENST00000513989 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-214ENST00000513989 CCL25O15444 150 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 NFE4Q86UQ8 179 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 URB1-AS1Q96HZ7 61 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 C2orf88Q9BSF0 95 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 CDC42SE2Q9NRR3 84 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 HSPB8Q9UJY1 196 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
NEDD9-214ENST00000513989 IGLV4-60A0A075B6I1 120 aa6.87□□□□□ -1.31
NEDD9-214ENST00000513989 TRAV8-4A0A0B4J246 113 aa6.87□□□□□ -1.31
NEDD9-214ENST00000513989 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
NEDD9-214ENST00000513989 M0R2N4 97 aa6.87□□□□□ -1.31
NEDD9-214ENST00000513989 PMCHL1Q16048 86 aa6.87□□□□□ -1.31
NEDD9-214ENST00000513989 MIAQ16674 131 aa6.87□□□□□ -1.31
NEDD9-214ENST00000513989 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
NEDD9-214ENST00000513989 TEX43Q6ZNM6 134 aa6.87□□□□□ -1.31
NEDD9-214ENST00000513989 TM2D2Q9BX73 214 aa6.87□□□□□ -1.31
NEDD9-214ENST00000513989 J3QL48 77 aa6.86□□□□□ -1.31
NEDD9-214ENST00000513989 LEPROTL1O95214 131 aa6.86□□□□□ -1.31
NEDD9-214ENST00000513989 PRSS1P07477 247 aa6.86□□□□□ -1.31
NEDD9-214ENST00000513989 REG3AQ06141 175 aa6.86□□□□□ -1.31
NEDD9-214ENST00000513989 SS18Q15532 418 aa6.86□□□□□ -1.31
NEDD9-214ENST00000513989 FAM19A2Q8N3H0 131 aa6.86□□□□□ -1.31
NEDD9-214ENST00000513989 IGKV3OR2-268A0A0C4DH90 116 aa6.85□□□□□ -1.31
NEDD9-214ENST00000513989 S100A2P29034 98 aa6.85□□□□□ -1.31
NEDD9-214ENST00000513989 PDZD11Q5EBL8 140 aa6.85□□□□□ -1.31
NEDD9-214ENST00000513989 C1orf134Q5TEV5 83 aa6.85□□□□□ -1.31
NEDD9-214ENST00000513989 Q8N3U1 123 aa6.85□□□□□ -1.31
NEDD9-214ENST00000513989 C1orf43Q9BWL3 253 aa6.85□□□□□ -1.31
NEDD9-214ENST00000513989 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
NEDD9-214ENST00000513989 DNAH11Q96DT5 4516 aa6.85□□□□□ -1.31
NEDD9-214ENST00000513989 IGLV4-3A0A075B6K6 122 aa6.84□□□□□ -1.31
NEDD9-214ENST00000513989 NUPR1O60356 82 aa6.84□□□□□ -1.31
NEDD9-214ENST00000513989 SEC11AP67812 179 aa6.84□□□□□ -1.31
NEDD9-214ENST00000513989 PMVKQ15126 192 aa6.84□□□□□ -1.31
NEDD9-214ENST00000513989 ENHOQ6UWT2 76 aa6.84□□□□□ -1.31
NEDD9-214ENST00000513989 Q6ZR54 194 aa6.84□□□□□ -1.31
NEDD9-214ENST00000513989 IFI27L1Q96BM0 104 aa6.84□□□□□ -1.31
NEDD9-214ENST00000513989 PACRGQ96M98 296 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-214ENST00000513989 DYNC1H1Q14204 4646 aaKnown RBP6.84□□□□□ -1.31
NEDD9-214ENST00000513989 ABCA13Q86UQ4 5058 aa6.84□□□□□ -1.31
NEDD9-214ENST00000513989 IGKV2D-24A0A075B6R9 120 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 TRAV13-1A0A0B4J241 112 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 LINC00959A0A1B0GUT2 108 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 IFITM10A6NMD0 228 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 PSCAO43653 123 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 FABP4P15090 132 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 CLPSL2Q6UWE3 100 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 Q6ZUT4 128 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 C6orf223Q8N319 242 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 AMELXQ99217 191 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-214ENST00000513989 MAP1LC3CQ9BXW4 147 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 CST9LQ9H4G1 147 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 Q9HAA7 133 aa6.83□□□□□ -1.32
NEDD9-214ENST00000513989 A0A096LNJ9 63 aa6.82□□□□□ -1.32
NEDD9-214ENST00000513989 LINC00310P59036 64 aa6.82□□□□□ -1.32
NEDD9-214ENST00000513989 RNASE13Q5GAN3 156 aaKnown RBP6.82□□□□□ -1.32
NEDD9-214ENST00000513989 A0A1B0GVY2 172 aa6.81□□□□□ -1.32
NEDD9-214ENST00000513989 SNRPEP62304 92 aaKnown RBP6.81□□□□□ -1.32
NEDD9-214ENST00000513989 CD164L2Q6UWJ8 174 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms