RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 A8MWL6 223 aa6.85□□□□□ -1.31
RNF4-218ENST00000513284 I3L3M4 83 aa6.85□□□□□ -1.31
RNF4-218ENST00000513284 GATCO43716 136 aaKnown RBP6.85□□□□□ -1.31
RNF4-218ENST00000513284 FGF6P10767 208 aa6.85□□□□□ -1.31
RNF4-218ENST00000513284 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.84□□□□□ -1.31
RNF4-218ENST00000513284 IGHV1-58A0A0C4DH39 117 aa6.84□□□□□ -1.31
RNF4-218ENST00000513284 IGKV2-29A2NJV5 120 aaPredicted RBP6.84□□□□□ -1.31
RNF4-218ENST00000513284 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
RNF4-218ENST00000513284 SS18Q15532 418 aa6.84□□□□□ -1.31
RNF4-218ENST00000513284 FAM231DQ6ZW35 169 aa6.84□□□□□ -1.31
RNF4-218ENST00000513284 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
RNF4-218ENST00000513284 MRAP2Q96G30 205 aa6.84□□□□□ -1.31
RNF4-218ENST00000513284 A0A096LNI7 61 aa6.83□□□□□ -1.32
RNF4-218ENST00000513284 TRBV6-5A0A0K0K1A5 114 aa6.83□□□□□ -1.32
RNF4-218ENST00000513284 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
RNF4-218ENST00000513284 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
RNF4-218ENST00000513284 CT83Q5H943 113 aa6.83□□□□□ -1.32
RNF4-218ENST00000513284 Q6ZRP5 223 aa6.83□□□□□ -1.32
RNF4-218ENST00000513284 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
RNF4-218ENST00000513284 CARD19Q96LW7 228 aa6.83□□□□□ -1.32
RNF4-218ENST00000513284 ST20Q9HBF5 79 aa6.83□□□□□ -1.32
RNF4-218ENST00000513284 FAM231BA6NCW3 169 aa6.82□□□□□ -1.32
RNF4-218ENST00000513284 XCL1P47992 114 aa6.82□□□□□ -1.32
RNF4-218ENST00000513284 PRR26Q8N8Z3 221 aa6.82□□□□□ -1.32
RNF4-218ENST00000513284 LINC00959A0A1B0GUT2 108 aa6.81□□□□□ -1.32
RNF4-218ENST00000513284 CCL25O15444 150 aa6.81□□□□□ -1.32
RNF4-218ENST00000513284 PPP1R17O96001 155 aa6.81□□□□□ -1.32
RNF4-218ENST00000513284 FOXI1Q12951 378 aa6.81□□□□□ -1.32
RNF4-218ENST00000513284 LINC01551Q86U37 167 aa6.81□□□□□ -1.32
RNF4-218ENST00000513284 EIF5A2Q9GZV4 153 aaKnown RBP6.81□□□□□ -1.32
RNF4-218ENST00000513284 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
RNF4-218ENST00000513284 C7orf77A4D0Y5 90 aa6.8□□□□□ -1.32
RNF4-218ENST00000513284 SRP19P09132 144 aaKnown RBP6.8□□□□□ -1.32
RNF4-218ENST00000513284 MALP21145 153 aa6.8□□□□□ -1.32
RNF4-218ENST00000513284 CEBPGP53567 150 aa6.8□□□□□ -1.32
RNF4-218ENST00000513284 CD164L2Q6UWJ8 174 aa6.8□□□□□ -1.32
RNF4-218ENST00000513284 SMIM7Q9BQ49 75 aa6.8□□□□□ -1.32
RNF4-218ENST00000513284 PSORS1C2Q9UIG4 136 aa6.8□□□□□ -1.32
RNF4-218ENST00000513284 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 A0A1B0GUT8 65 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 ZNF727A8MUV8 499 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 ESDP10768 282 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 FCER1GP30273 86 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 SYCNQ0VAF6 134 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 PRR4Q16378 134 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 MRPL52Q86TS9 123 aaKnown RBP6.79□□□□□ -1.32
RNF4-218ENST00000513284 ZNF664Q8N3J9 261 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 TMEM191AQ9H0A3 160 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 TMEM242Q9NWH2 141 aa6.79□□□□□ -1.32
RNF4-218ENST00000513284 C1orf196B1AJZ1 125 aa6.78□□□□□ -1.32
RNF4-218ENST00000513284 APOMO95445 188 aa6.78□□□□□ -1.32
RNF4-218ENST00000513284 TSKUQ8WUA8 353 aa6.78□□□□□ -1.32
RNF4-218ENST00000513284 TMEM18Q96B42 140 aa6.78□□□□□ -1.32
RNF4-218ENST00000513284 KIR2DL4Q99706 377 aa6.78□□□□□ -1.32
RNF4-218ENST00000513284 OSTCQ9NRP0 149 aa6.78□□□□□ -1.32
RNF4-218ENST00000513284 CDC42SE2Q9NRR3 84 aa6.78□□□□□ -1.32
RNF4-218ENST00000513284 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
RNF4-218ENST00000513284 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
RNF4-218ENST00000513284 HIGD1CA8MV81 97 aa6.77□□□□□ -1.33
RNF4-218ENST00000513284 C9JQL5 133 aa6.77□□□□□ -1.33
RNF4-218ENST00000513284 VCYO14598 125 aa6.77□□□□□ -1.33
RNF4-218ENST00000513284 TSHBP01222 138 aa6.77□□□□□ -1.33
RNF4-218ENST00000513284 CAMPP49913 170 aa6.77□□□□□ -1.33
RNF4-218ENST00000513284 RIGQ13278 110 aa6.77□□□□□ -1.33
RNF4-218ENST00000513284 MUC17Q685J3 4493 aa6.76□□□□□ -1.33
RNF4-218ENST00000513284 IGLV4-69A0A075B6H9 119 aa6.76□□□□□ -1.33
RNF4-218ENST00000513284 COX7A2LO14548 114 aa6.76□□□□□ -1.33
RNF4-218ENST00000513284 PPP1R2P9O14990 202 aa6.76□□□□□ -1.33
RNF4-218ENST00000513284 POLR2KP53803 58 aaKnown RBP6.76□□□□□ -1.33
RNF4-218ENST00000513284 CSDC2Q9Y534 153 aaKnown RBP6.76□□□□□ -1.33
RNF4-218ENST00000513284 V9GYV3 84 aa6.76□□□□□ -1.33
RNF4-218ENST00000513284 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
RNF4-218ENST00000513284 TCAPO15273 167 aa6.75□□□□□ -1.33
RNF4-218ENST00000513284 RAB4AP20338 218 aa6.75□□□□□ -1.33
RNF4-218ENST00000513284 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
RNF4-218ENST00000513284 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
RNF4-218ENST00000513284 TMEM241Q24JQ0 296 aa6.75□□□□□ -1.33
RNF4-218ENST00000513284 FAM74A3Q4VXF1 159 aa6.75□□□□□ -1.33
RNF4-218ENST00000513284 CAMK2N2Q96S95 79 aa6.75□□□□□ -1.33
RNF4-218ENST00000513284 SUMO2P61956 95 aaKnown RBP6.74□□□□□ -1.33
RNF4-218ENST00000513284 RPL23P62829 140 aaKnown RBP6.74□□□□□ -1.33
RNF4-218ENST00000513284 SRSF3P84103 164 aaKnown RBP6.74□□□□□ -1.33
RNF4-218ENST00000513284 AMN1Q8IY45 258 aa6.74□□□□□ -1.33
RNF4-218ENST00000513284 NUP35Q8NFH5 326 aa6.74□□□□□ -1.33
RNF4-218ENST00000513284 LINC00526Q96FQ7 95 aa6.74□□□□□ -1.33
RNF4-218ENST00000513284 C2orf48Q96LS8 159 aa6.74□□□□□ -1.33
RNF4-218ENST00000513284 SMDT1Q9H4I9 107 aa6.73□□□□□ -1.33
RNF4-218ENST00000513284 TRAV13-1A0A0B4J241 112 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 LINC00862A6NCI5 91 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 F8WDY8 70 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
RNF4-218ENST00000513284 PEA15Q15121 130 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 TIMM21Q9BVV7 248 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 NAT8BQ9UHF3 227 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 UBE2D4Q9Y2X8 147 aa6.72□□□□□ -1.33
RNF4-218ENST00000513284 MT-ND6P03923 174 aa6.71□□□□□ -1.34
RNF4-218ENST00000513284 SPAG11BQ08648 103 aa6.71□□□□□ -1.34
RNF4-218ENST00000513284 ADIRFQ15847 76 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms