RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 PRR9Q5T870 116 aa12.84□□□□□ -0.35
ARHGEF28-212ENST00000513042 KIR2DL5BQ8NHK3 375 aa12.83□□□□□ -0.36
ARHGEF28-212ENST00000513042 TRBV30A0A0K0K1B3 111 aa12.83□□□□□ -0.36
ARHGEF28-212ENST00000513042 CLUHP3Q96NS8 147 aa12.83□□□□□ -0.36
ARHGEF28-212ENST00000513042 TRBV6-4A0A1B0GX49 114 aa12.82□□□□□ -0.36
ARHGEF28-212ENST00000513042 IGLV2-11P01706 119 aa12.82□□□□□ -0.36
ARHGEF28-212ENST00000513042 NDUFC2-KCTD14E9PQ53 114 aa12.82□□□□□ -0.36
ARHGEF28-212ENST00000513042 PRR4Q16378 134 aa12.82□□□□□ -0.36
ARHGEF28-212ENST00000513042 MIFP14174 115 aa12.82□□□□□ -0.36
ARHGEF28-212ENST00000513042 IGHV4-30-4P0DP06 118 aa12.81□□□□□ -0.36
ARHGEF28-212ENST00000513042 ZNF702PQ9H963 129 aa12.81□□□□□ -0.36
ARHGEF28-212ENST00000513042 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■■□ 25.7
ARHGEF28-212ENST00000513042 DSCAML1Q8TD84 2053 aa12.81□□□□□ -0.36
ARHGEF28-212ENST00000513042 LY6G6DO95868 133 aa12.8□□□□□ -0.36
ARHGEF28-212ENST00000513042 IGLV9-49A0A0B4J1Y8 123 aa12.8□□□□□ -0.36
ARHGEF28-212ENST00000513042 Q6ZS46 218 aa12.79□□□□□ -0.36
ARHGEF28-212ENST00000513042 FAM30AQ9NZY2 134 aa12.79□□□□□ -0.36
ARHGEF28-212ENST00000513042 RBX1P62877 108 aa12.79□□□□□ -0.36
ARHGEF28-212ENST00000513042 GPR179Q6PRD1 2367 aa12.79□□□□□ -0.36
ARHGEF28-212ENST00000513042 GAS8-AS1O95177 125 aa12.79□□□□□ -0.36
ARHGEF28-212ENST00000513042 RNASE3P12724 160 aaKnown RBP12.79□□□□□ -0.36
ARHGEF28-212ENST00000513042 UBE2D1P51668 147 aa12.79□□□□□ -0.36
ARHGEF28-212ENST00000513042 ATP5EP2Q5VTU8 51 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 NRACQ8N912 160 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 C11orf71Q6IPW1 123 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 UBE2D4Q9Y2X8 147 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 SMIM11BQ8TCY0 68 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 C11orf21Q9P2W6 132 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 Q6ZQY7 126 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 C7orf33Q8WU49 177 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 PCNX1Q96RV3 2341 aa12.78□□□□□ -0.36
ARHGEF28-212ENST00000513042 NCOA6Q14686 2063 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF28-212ENST00000513042 EBI3Q14213 229 aa12.76□□□□□ -0.37
ARHGEF28-212ENST00000513042 KPRPQ5T749 579 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF28-212ENST00000513042 C9orf85Q96MD7 179 aa12.76□□□□□ -0.37
ARHGEF28-212ENST00000513042 LINC00959A0A1B0GUT2 108 aa12.76□□□□□ -0.37
ARHGEF28-212ENST00000513042 TRAV10A0A0B4J240 114 aa12.76□□□□□ -0.37
ARHGEF28-212ENST00000513042 FAM240AA0A1B0GVK7 77 aa12.76□□□□□ -0.37
ARHGEF28-212ENST00000513042 ALPK3Q96L96 1907 aa12.76□□□□□ -0.37
ARHGEF28-212ENST00000513042 KIAA1549Q9HCM3 1950 aa12.75□□□□□ -0.37
ARHGEF28-212ENST00000513042 TRBV27A0A0K0K1C4 114 aa12.75□□□□□ -0.37
ARHGEF28-212ENST00000513042 CD164L2Q6UWJ8 174 aa12.75□□□□□ -0.37
ARHGEF28-212ENST00000513042 M0R378 163 aa12.74□□□□□ -0.37
ARHGEF28-212ENST00000513042 EDN2P20800 178 aa12.74□□□□□ -0.37
ARHGEF28-212ENST00000513042 ZNF843Q8N446 348 aa12.74□□□□□ -0.37
ARHGEF28-212ENST00000513042 YPEL4Q96NS1 127 aa12.74□□□□□ -0.37
ARHGEF28-212ENST00000513042 K7ERS5 55 aa12.74□□□□□ -0.37
ARHGEF28-212ENST00000513042 C2orf91Q6ZV80 131 aa12.73□□□□□ -0.37
ARHGEF28-212ENST00000513042 NOTCH3Q9UM47 2321 aa12.73□□□□□ -0.37
ARHGEF28-212ENST00000513042 PRR15LQ9BU68 103 aa12.73□□□□□ -0.37
ARHGEF28-212ENST00000513042 SHANK1Q9Y566 2161 aa12.73□□□□□ -0.37
ARHGEF28-212ENST00000513042 SHISA2Q6UWI4 295 aa12.73□□□□□ -0.37
ARHGEF28-212ENST00000513042 PYGO1Q9Y3Y4 419 aa12.73□□□□□ -0.37
ARHGEF28-212ENST00000513042 SPTAN1Q13813 2472 aaKnown RBP12.72□□□□□ -0.37
ARHGEF28-212ENST00000513042 NANOS2P60321 138 aaKnown RBP12.72□□□□□ -0.37
ARHGEF28-212ENST00000513042 MRPL55Q7Z7F7 128 aaKnown RBP12.72□□□□□ -0.37
ARHGEF28-212ENST00000513042 PSMG3-AS1Q96PY0 264 aa12.72□□□□□ -0.37
ARHGEF28-212ENST00000513042 LY6G6CO95867 125 aa12.72□□□□□ -0.37
ARHGEF28-212ENST00000513042 PLAC8L1A1L4L8 177 aa12.72□□□□□ -0.37
ARHGEF28-212ENST00000513042 CCDC179H3BU77 68 aa12.71□□□□□ -0.37
ARHGEF28-212ENST00000513042 POM121L12Q8N7R1 296 aa12.71□□□□□ -0.37
ARHGEF28-212ENST00000513042 DHRS4-AS1Q9P1J3 65 aa12.71□□□□□ -0.37
ARHGEF28-212ENST00000513042 IGLV4-69A0A075B6H9 119 aa12.71□□□□□ -0.38
ARHGEF28-212ENST00000513042 TANC2Q9HCD6 1990 aa12.7□□□□□ -0.38
ARHGEF28-212ENST00000513042 UBE2D3P61077 147 aa12.7□□□□□ -0.38
ARHGEF28-212ENST00000513042 LINC01006Q8NI28 216 aa12.7□□□□□ -0.38
ARHGEF28-212ENST00000513042 PLCE1Q9P212 2302 aa12.69□□□□□ -0.38
ARHGEF28-212ENST00000513042 LOC107984640A0A0U1RRK4 108 aa12.69□□□□□ -0.38
ARHGEF28-212ENST00000513042 LELP1Q5T871 98 aa12.69□□□□□ -0.38
ARHGEF28-212ENST00000513042 PCNX2A6NKB5 2137 aa12.69□□□□□ -0.38
ARHGEF28-212ENST00000513042 TIMM17BO60830 172 aa12.68□□□□□ -0.38
ARHGEF28-212ENST00000513042 LST1O00453 97 aa12.68□□□□□ -0.38
ARHGEF28-212ENST00000513042 NDUFA7O95182 113 aa12.68□□□□□ -0.38
ARHGEF28-212ENST00000513042 LTBP2Q14767 1821 aa12.68□□□□□ -0.38
ARHGEF28-212ENST00000513042 COL4A4P53420 1690 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF28-212ENST00000513042 ZNF706Q9Y5V0 76 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF28-212ENST00000513042 A6NED7 52 aa12.67□□□□□ -0.38
ARHGEF28-212ENST00000513042 FAM19A3Q7Z5A8 133 aa12.67□□□□□ -0.38
ARHGEF28-212ENST00000513042 Q8N6K4 173 aa12.67□□□□□ -0.38
ARHGEF28-212ENST00000513042 SERP2Q8N6R1 65 aa12.67□□□□□ -0.38
ARHGEF28-212ENST00000513042 ZNF73O43830 326 aaPredicted RBP12.67□□□□□ -0.38
ARHGEF28-212ENST00000513042 RETNQ9HD89 108 aa12.67□□□□□ -0.38
ARHGEF28-212ENST00000513042 FSTL3O95633 263 aa12.66□□□□□ -0.38
ARHGEF28-212ENST00000513042 RIF1Q5UIP0 2472 aaKnown RBP12.66□□□□□ -0.38
ARHGEF28-212ENST00000513042 CRIP2P52943 208 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF28-212ENST00000513042 KLLNB2CW77 178 aa12.66□□□□□ -0.38
ARHGEF28-212ENST00000513042 CELA1Q9UNI1 258 aa12.65□□□□□ -0.38
ARHGEF28-212ENST00000513042 C9orf116Q5BN46 136 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF28-212ENST00000513042 MRPS36P82909 103 aaKnown RBP12.63□□□□□ -0.39
ARHGEF28-212ENST00000513042 RETNLBQ9BQ08 111 aa12.63□□□□□ -0.39
ARHGEF28-212ENST00000513042 FREM1Q5H8C1 2179 aa12.63□□□□□ -0.39
ARHGEF28-212ENST00000513042 IGLV1-40P01703 118 aa12.63□□□□□ -0.39
ARHGEF28-212ENST00000513042 CYSRT1A8MQ03 144 aa12.62□□□□□ -0.39
ARHGEF28-212ENST00000513042 NBASA2RRP1 2371 aa12.62□□□□□ -0.39
ARHGEF28-212ENST00000513042 XGP55808 180 aa12.62□□□□□ -0.39
ARHGEF28-212ENST00000513042 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
ARHGEF28-212ENST00000513042 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
ARHGEF28-212ENST00000513042 Q8N9L7 120 aa12.62□□□□□ -0.39
ARHGEF28-212ENST00000513042 SMR3AQ99954 134 aa12.62□□□□□ -0.39
ARHGEF28-212ENST00000513042 SERP1Q9Y6X1 66 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 1017.5 ms