RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TRAV4A0A0B4J268 109 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 C16orf90A8MZG2 172 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 GGTLC3B5MD39 225 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 TMEM262E9PQX1 116 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 H3BNG1 76 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 M0R381 172 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 SH2D1AO60880 128 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 P01737 135 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 PFN1P07737 140 aaKnown RBP2.38□□□□□ -2.03
HTT-210ENST00000512909 ARMS2P0C7Q2 107 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 CEBPGP53567 150 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 TTC32Q5I0X7 151 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 EIF5AL1Q6IS14 154 aaKnown RBP2.38□□□□□ -2.03
HTT-210ENST00000512909 SPINT4Q6UDR6 99 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 SPATA12Q7Z6I5 190 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 BAGE2Q86Y30 109 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 ATP6V0E2Q8NHE4 81 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 HIST1H2BAQ96A08 127 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 NKX6-2Q9C056 277 aaPredicted RBP2.38□□□□□ -2.03
HTT-210ENST00000512909 MED9Q9NWA0 146 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 ZFP30Q9Y2G7 519 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 MRPS16Q9Y3D3 137 aaKnown RBP2.38□□□□□ -2.03
HTT-210ENST00000512909 LY96Q9Y6Y9 160 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 ARL2-SNX15V9GYD0 113 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 TENM3Q9P273 2699 aa2.38□□□□□ -2.03
HTT-210ENST00000512909 RAB19A4D1S5 217 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 HMSDA8MTL9 139 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 UMAD1C9J7I0 102 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 H3BVH4 76 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 IFNA1P01562 189 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 S100A9P06702 114 aaKnown RBP2.37□□□□□ -2.03
HTT-210ENST00000512909 CRYGDP07320 174 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 SEC11BP0C7V7 166 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 SMIM17P0DL12 118 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 FUSP35637 526 aaKnown RBP eCLIP2.37□□□□□ -2.03
HTT-210ENST00000512909 C6orf99Q4VX62 202 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 FAM162BQ5T6X4 162 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 SPANXN1Q5VSR9 72 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 CFAP126Q5VTH2 177 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 SLC7A5P1Q8MH63 180 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 SLC25A29Q8N8R3 303 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.37□□□□□ -2.03
HTT-210ENST00000512909 ZC2HC1AQ96GY0 325 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 FMC1Q96HJ9 113 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 URGCP-MRPS24S4R325 110 aa2.37□□□□□ -2.03
HTT-210ENST00000512909 A8MWV9 139 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 PSPHP1O15172 72 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 MGPP08493 103 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 RNASE3P12724 160 aaKnown RBP2.36□□□□□ -2.03
HTT-210ENST00000512909 CCL20P78556 96 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 RPL19P84098 196 aaKnown RBP2.36□□□□□ -2.03
HTT-210ENST00000512909 RPL18AQ02543 176 aaKnown RBP2.36□□□□□ -2.03
HTT-210ENST00000512909 RHOHQ15669 191 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 ZNF56Q15929 161 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 TDRG1Q3Y452 100 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 LCE3AQ5TA76 89 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 DPPA3Q6W0C5 159 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 Q86TA4 180 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 AKAP14Q86UN6 197 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 WFDC10BQ8IUB3 73 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 ORMDL3Q8N138 153 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 SUN5Q8TC36 379 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 MBD3L1Q8WWY6 194 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 C18orf15Q96N68 181 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 SAMD10Q9BYL1 202 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 GTSF1LQ9H1H1 148 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 DNAH3Q8TD57 4116 aa2.36□□□□□ -2.03
HTT-210ENST00000512909 A0A087WX48 190 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 TRBV6-4A0A1B0GX49 114 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 GZMBP10144 247 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 RPL35P42766 123 aaKnown RBP2.35□□□□□ -2.03
HTT-210ENST00000512909 GNG4P50150 75 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 CRIP1P50238 77 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 RAB5CP51148 216 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 ZNF345Q14585 488 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 SLC51BQ86UW2 128 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 ZFP82Q8N141 532 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 ST20-AS1Q8NBB2 130 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 OR2D3Q8NGH3 330 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 DEFB104AQ8WTQ1 72 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 DPH3Q96FX2 82 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 EIF5A2Q9GZV4 153 aaKnown RBP2.35□□□□□ -2.03
HTT-210ENST00000512909 MANBALQ9NQG1 85 aa2.35□□□□□ -2.03
HTT-210ENST00000512909 PRKDCP78527 4128 aaKnown RBP2.35□□□□□ -2.03
HTT-210ENST00000512909 RBFOX3A6NFN3 312 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 G3V3Q6 166 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 LECT2O14960 151 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 TCAPO15273 167 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 PDE6DO43924 150 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 LTAP01374 205 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 C1QBP02746 253 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 IGLV7-43P04211 117 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 SULT1A2P50226 295 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 NKX2-5P52952 324 aaPredicted RBP2.34□□□□□ -2.03
HTT-210ENST00000512909 RPS20P60866 119 aaKnown RBP2.34□□□□□ -2.03
HTT-210ENST00000512909 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 CENPWQ5EE01 88 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 LELP1Q5T871 98 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 ALKAL2Q6UX46 152 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms