RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 UBE2L5PA0A1B0GUS4 154 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 DNAJC9-AS1A6NH13 148 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 MGST1P10620 155 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 UBE2L3P68036 154 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 PSMG4Q5JS54 123 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 S100A7L2Q5SY68 101 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 Q6P435 159 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 ZNF497Q6ZNH5 498 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 TTTY13Q9BZ97 58 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 NHP2Q9NX24 153 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 ZNRD1Q9P1U0 126 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGHV3-43A0A0B4J1X8 118 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 ATOX1O00244 68 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 LEPROTO15243 131 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGHV3-48P01763 117 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 UBE2AP49459 152 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 NANOS2P60321 138 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 RBM3P98179 157 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 Q8N7P7 452 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 C15orf53Q8NAA6 179 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 ARHGAP5-AS1Q96IT6 56 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 V9GYV3 84 aa3.61□□□□□ -1.83
TRAPPC11-208ENST00000511955 CEND1Q8N111 149 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 POM121L12Q8N7R1 296 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 DSCAML1Q8TD84 2053 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 TMEM14DPA8MWL7 114 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 PPYP01298 95 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGKV1-39P01597 117 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGKV1D-39P04432 117 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 CD24P25063 80 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 SUMO4Q6EEV6 95 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 MGST2Q99735 147 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 PLXNB1O43157 2135 aa3.6□□□□□ -1.83
TRAPPC11-208ENST00000511955 TRAV2A0A0B4J234 112 aa3.59□□□□□ -1.83
TRAPPC11-208ENST00000511955 TCRBV4S1A1TA0A5B7 111 aa3.59□□□□□ -1.83
TRAPPC11-208ENST00000511955 TMEM30CPA0ZSE6 113 aa3.59□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGHV1-8P0DP01 117 aa3.59□□□□□ -1.83
TRAPPC11-208ENST00000511955 SLURP1P55000 103 aa3.59□□□□□ -1.83
TRAPPC11-208ENST00000511955 DEFB112Q30KQ8 113 aa3.59□□□□□ -1.83
TRAPPC11-208ENST00000511955 C18orf65Q6ZTR6 163 aa3.59□□□□□ -1.83
TRAPPC11-208ENST00000511955 ZNF580Q9UK33 172 aa3.59□□□□□ -1.83
TRAPPC11-208ENST00000511955 SMIM27A0A1W2PRY6 76 aa3.59□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGKV1D-33P01593 117 aa3.59□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGKV1-33P01594 117 aa3.59□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGHV1-69P01742 117 aa3.59□□□□□ -1.84
TRAPPC11-208ENST00000511955 HERVK_113P61574 105 aa3.59□□□□□ -1.84
TRAPPC11-208ENST00000511955 OCR1Q9BZK8 76 aa3.59□□□□□ -1.84
TRAPPC11-208ENST00000511955 NXT2Q9NPJ8 142 aaKnown RBP3.59□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGHV4-4A0A075B6R2 117 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 EGFEM1PQ0D2K5 195 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 LY6EQ16553 131 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 FAM104BQ5XKR9 115 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 SLC25A29Q8N8R3 303 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 CSNK1G2-AS1Q8NCQ2 148 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 CLEC2BQ92478 149 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 KLK15Q9H2R5 256 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGHV4OR15-8A0A075B7B6 117 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 M0R1W7 72 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 SPINK4O60575 86 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 CKS2P33552 79 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 HCP5Q6MZN7 132 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 DYNAPQ8N1N2 210 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 MYOZ3Q8TDC0 251 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 ODF3Q96PU9 254 aa3.58□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGHV3-72A0A0B4J1Y9 119 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGKV1-6A0A0C4DH72 117 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 C17orf98A8MV24 154 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 IL4P05112 153 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 CD28P10747 220 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 GCHFRP30047 84 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 C5orf38Q86SI9 138 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 Q8N8P6 123 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 PKD1L1Q8TDX9 2849 aa3.57□□□□□ -1.84
TRAPPC11-208ENST00000511955 PIGBOS1A0A0B4J2F0 54 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 SCO2A0A1W2PP80 73 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 H3BUX3 64 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 FSHBP01225 129 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 RNASE2P10153 161 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 RMI2Q96E14 147 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 DHRS4-AS1Q9P1J3 65 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 VWFP04275 2813 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 CGB3P0DN86 165 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 CGB7P0DN87 165 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 CMC4P56277 68 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 Q6YL49 198 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 MIR17HGQ75NE6 70 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 NABP2Q9BQ15 211 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 UPK3BQ9BT76 320 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 DPM3Q9P2X0 92 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 LINC00474Q9P2X8 69 aa3.56□□□□□ -1.84
TRAPPC11-208ENST00000511955 IGHV3-74A0A0B4J1X5 117 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 A0A0J9YXY3 114 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 CCKP06307 115 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 C2orf83Q53S99 150 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 RPL39P5Q59GN2 51 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 PATE2Q6UY27 113 aa3.55□□□□□ -1.84
TRAPPC11-208ENST00000511955 ATP11AUNQ6ZP68 121 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms