RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ZNF815PA8K554 130 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 HIGD1CA8MV81 97 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 CCL3L1P16619 93 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 SSBP1Q04837 148 aaKnown RBP2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 DEFB121Q5J5C9 76 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 C10orf55Q5SWW7 151 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 PROK2Q9HC23 129 aa2.28□□□□□ -2.04
SMARCA5-202ENST00000508573 SCN7AQ01118 1682 aa2.28□□□□□ -2.05
SMARCA5-202ENST00000508573 ABCA9Q8IUA7 1624 aa2.28□□□□□ -2.05
SMARCA5-202ENST00000508573 UNC13CQ8NB66 2214 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 TIAM1Q13009 1591 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 ASXL1Q8IXJ9 1541 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 BTAF1O14981 1849 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 PPP1R17O96001 155 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 RGPD1P0DJD0 1748 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 LRRC37A3O60309 1634 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 CEP192Q8TEP8 1941 aa2.27□□□□□ -2.05
SMARCA5-202ENST00000508573 C1orf167Q5SNV9 1468 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 IGLV3-32A0A0A0MS00 114 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 MYMXA0A1B0GTQ4 84 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 SFTA3P0C7M3 94 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 LINC00315P59091 139 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 SPAG11BQ08648 103 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 SPAG11AQ6PDA7 123 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 COX7B2Q8TF08 81 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 ARL2-SNX15V9GYD0 113 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 V9GYH0 126 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 SHANK1Q9Y566 2161 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 SIP14410 1827 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 ESPL1Q14674 2120 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 DLEC1Q9Y238 1755 aa2.26□□□□□ -2.05
SMARCA5-202ENST00000508573 NBDYA0A0U1RRE5 68 aa2.25□□□□□ -2.05
SMARCA5-202ENST00000508573 LOC285095A0A1B0GVY8 99 aa2.25□□□□□ -2.05
SMARCA5-202ENST00000508573 IGLV3-19P01714 112 aa2.25□□□□□ -2.05
SMARCA5-202ENST00000508573 IGLV6-57P01721 117 aa2.25□□□□□ -2.05
SMARCA5-202ENST00000508573 SAA2P0DJI9 122 aaPredicted RBP2.25□□□□□ -2.05
SMARCA5-202ENST00000508573 TVP23CQ96ET8 276 aa2.25□□□□□ -2.05
SMARCA5-202ENST00000508573 WFDC10AQ9H1F0 79 aa2.25□□□□□ -2.05
SMARCA5-202ENST00000508573 PRXQ9BXM0 1461 aa2.25□□□□□ -2.05
SMARCA5-202ENST00000508573 BRWD1Q9NSI6 2320 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 AFDNP55196 1824 aaKnown RBP2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 URB2Q14146 1524 aaKnown RBP2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 A0A087WXM4 84 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 H3BRN7 92 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 PRB2P02812 416 aaPredicted RBP2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 IL9P15248 144 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 SPINT3P49223 89 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 CCL18P55774 89 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 RPL37AP61513 92 aaKnown RBP2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 PLGLAQ15195 96 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 PRR9Q5T870 116 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 DEFB132Q7Z7B7 95 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 KLK9Q9UKQ9 250 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 ARFGEF3Q5TH69 2177 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 RREB1Q92766 1687 aa2.24□□□□□ -2.05
SMARCA5-202ENST00000508573 PLXNC1O60486 1568 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 GPR179Q6PRD1 2367 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 DOCK11Q5JSL3 2073 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 IGKV2-28A0A075B6P5 120 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 A0A087WTM6 91 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 IGKV2D-28P01615 120 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 Q86TA4 180 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 PRR15LQ9BU68 103 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 TTTY12Q9BZ98 90 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 LAMA4Q16363 1823 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 MED12Q93074 2177 aa2.23□□□□□ -2.05
SMARCA5-202ENST00000508573 ARFGEF1Q9Y6D6 1849 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 A0A1B0GWA3 101 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 CEBPZOSA8MTT3 80 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 FXYD1O00168 92 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 DNAL4O96015 105 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 ARMS2P0C7Q2 107 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 COX8AP10176 69 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 FXYD3Q14802 87 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 Q6JHZ5 121 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 C6orf201Q7Z4U5 140 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 LINC00304Q8N9R0 145 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 ZNF563Q8TA94 476 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 HILPDAQ9Y5L2 63 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 ABCA4P78363 2273 aa2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 PDCD11Q14690 1871 aaKnown RBP2.22□□□□□ -2.05
SMARCA5-202ENST00000508573 IGKV2-29A2NJV5 120 aaPredicted RBP2.21□□□□□ -2.06
SMARCA5-202ENST00000508573 GCHFRP30047 84 aa2.21□□□□□ -2.06
SMARCA5-202ENST00000508573 FDCSPQ8NFU4 85 aa2.21□□□□□ -2.06
SMARCA5-202ENST00000508573 PPP1R1CQ8WVI7 109 aa2.21□□□□□ -2.06
SMARCA5-202ENST00000508573 AMELXQ99217 191 aa2.21□□□□□ -2.06
SMARCA5-202ENST00000508573 CEP170BQ9Y4F5 1589 aaPredicted RBP2.21□□□□□ -2.06
SMARCA5-202ENST00000508573 MAP2P11137 1827 aaKnown RBP2.21□□□□□ -2.06
SMARCA5-202ENST00000508573 ABCA6Q8N139 1617 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 SPTBP11277 2137 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 PI4KAP42356 2102 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 SPAG17Q6Q759 2223 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 TRGV4A0A0C4DH28 118 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 F8VRH5 84 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 LEPROTL1O95214 131 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 FAM74A4Q5TZK3 123 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 C5orf56Q8N8D9 126 aa2.2□□□□□ -2.06
SMARCA5-202ENST00000508573 UBE2D4Q9Y2X8 147 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms