RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 RBX1P62877 108 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 MPV17L2Q567V2 206 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 ZC2HC1BQ5TFG8 222 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 Q6ZUT4 128 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 Q8N976 141 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 BAALCQ8WXS3 180 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 VCX2Q9H322 139 aa11.96□□□□□ -0.49
RNF4-209ENST00000507784 MRPS16Q9Y3D3 137 aaKnown RBP11.96□□□□□ -0.49
RNF4-209ENST00000507784 IGLV4-60A0A075B6I1 120 aa11.95□□□□□ -0.5
RNF4-209ENST00000507784 PAPPA-AS1Q5QFB9 102 aa11.95□□□□□ -0.5
RNF4-209ENST00000507784 SYS1-DBNDD2H3BUS1 97 aa11.94□□□□□ -0.5
RNF4-209ENST00000507784 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
RNF4-209ENST00000507784 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
RNF4-209ENST00000507784 Q8N3U1 123 aa11.94□□□□□ -0.5
RNF4-209ENST00000507784 CSDC2Q9Y534 153 aaKnown RBP11.94□□□□□ -0.5
RNF4-209ENST00000507784 A0A1B0GUV1 79 aa11.93□□□□□ -0.5
RNF4-209ENST00000507784 MRPS36P82909 103 aaKnown RBP11.93□□□□□ -0.5
RNF4-209ENST00000507784 PMVKQ15126 192 aa11.93□□□□□ -0.5
RNF4-209ENST00000507784 CDC42SE2Q9NRR3 84 aa11.93□□□□□ -0.5
RNF4-209ENST00000507784 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
RNF4-209ENST00000507784 SCGB1D1O95968 90 aa11.92□□□□□ -0.5
RNF4-209ENST00000507784 ANGP03950 147 aaKnown RBP11.92□□□□□ -0.5
RNF4-209ENST00000507784 NPSP0C0P6 89 aa11.92□□□□□ -0.5
RNF4-209ENST00000507784 PET117Q6UWS5 81 aa11.92□□□□□ -0.5
RNF4-209ENST00000507784 FAM104AQ969W3 186 aa11.92□□□□□ -0.5
RNF4-209ENST00000507784 PRSS29PA6NIE9 313 aa11.91□□□□□ -0.5
RNF4-209ENST00000507784 SIVA1O15304 175 aa11.91□□□□□ -0.5
RNF4-209ENST00000507784 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
RNF4-209ENST00000507784 CST9LQ9H4G1 147 aa11.91□□□□□ -0.5
RNF4-209ENST00000507784 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
RNF4-209ENST00000507784 C20orf202A1L168 122 aa11.9□□□□□ -0.5
RNF4-209ENST00000507784 C3orf84H3BNL1 204 aa11.9□□□□□ -0.5
RNF4-209ENST00000507784 SPATA12Q7Z6I5 190 aa11.9□□□□□ -0.5
RNF4-209ENST00000507784 AMELXQ99217 191 aa11.9□□□□□ -0.5
RNF4-209ENST00000507784 PMCHL2Q9BQD1 86 aa11.9□□□□□ -0.5
RNF4-209ENST00000507784 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
RNF4-209ENST00000507784 CLPSL2Q6UWE3 100 aa11.89□□□□□ -0.51
RNF4-209ENST00000507784 UPK3BQ9BT76 320 aa11.89□□□□□ -0.51
RNF4-209ENST00000507784 KLK12Q9UKR0 248 aa11.89□□□□□ -0.51
RNF4-209ENST00000507784 CASC10Q5T4H9 136 aa11.88□□□□□ -0.51
RNF4-209ENST00000507784 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
RNF4-209ENST00000507784 LINC00269Q8N2A0 174 aa11.88□□□□□ -0.51
RNF4-209ENST00000507784 Q9H8V8 135 aa11.88□□□□□ -0.51
RNF4-209ENST00000507784 TRAV13-1A0A0B4J241 112 aa11.87□□□□□ -0.51
RNF4-209ENST00000507784 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
RNF4-209ENST00000507784 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
RNF4-209ENST00000507784 TGP01266 2768 aa11.86□□□□□ -0.51
RNF4-209ENST00000507784 DNAH10OSP0CZ25 163 aa11.86□□□□□ -0.51
RNF4-209ENST00000507784 ODF1Q14990 250 aa11.86□□□□□ -0.51
RNF4-209ENST00000507784 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
RNF4-209ENST00000507784 DYNC2H1Q8NCM8 4307 aaKnown RBP11.86□□□□□ -0.51
RNF4-209ENST00000507784 A0A0J9YXV3 536 aa11.85□□□□□ -0.51
RNF4-209ENST00000507784 CRPP02741 224 aa11.85□□□□□ -0.51
RNF4-209ENST00000507784 REG3AQ06141 175 aa11.85□□□□□ -0.51
RNF4-209ENST00000507784 JOSD1Q15040 202 aaPredicted RBP11.85□□□□□ -0.51
RNF4-209ENST00000507784 LINC01545Q5VT33 79 aa11.85□□□□□ -0.51
RNF4-209ENST00000507784 F8VRH5 84 aa11.84□□□□□ -0.51
RNF4-209ENST00000507784 UBE2D1P51668 147 aa11.84□□□□□ -0.51
RNF4-209ENST00000507784 SS18Q15532 418 aa11.84□□□□□ -0.51
RNF4-209ENST00000507784 UBE2WQ96B02 151 aa11.84□□□□□ -0.51
RNF4-209ENST00000507784 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
RNF4-209ENST00000507784 LINC00959A0A1B0GUT2 108 aa11.83□□□□□ -0.52
RNF4-209ENST00000507784 DPM2O94777 84 aa11.83□□□□□ -0.52
RNF4-209ENST00000507784 ATOH7Q8N100 152 aa11.83□□□□□ -0.52
RNF4-209ENST00000507784 IGKCP01834 107 aa11.82□□□□□ -0.52
RNF4-209ENST00000507784 PYY3Q5JQD4 70 aa11.82□□□□□ -0.52
RNF4-209ENST00000507784 IGLV4-69A0A075B6H9 119 aa11.81□□□□□ -0.52
RNF4-209ENST00000507784 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
RNF4-209ENST00000507784 CHAC1Q9BUX1 264 aa11.81□□□□□ -0.52
RNF4-209ENST00000507784 GEMIN7Q9H840 131 aaKnown RBP11.81□□□□□ -0.52
RNF4-209ENST00000507784 IGLV10-54A0A075B6I4 117 aa11.8□□□□□ -0.52
RNF4-209ENST00000507784 C11orf86A6NJI1 115 aa11.8□□□□□ -0.52
RNF4-209ENST00000507784 IGLC3P0DOY3 106 aa11.8□□□□□ -0.52
RNF4-209ENST00000507784 TINCRA0A1B0GVN0 87 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 CCL25O15444 150 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 LY6G6CO95867 125 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 PLNP26678 52 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 SEC11AP67812 179 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 COX6A2Q02221 97 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 LINC00242Q5T6M2 205 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
RNF4-209ENST00000507784 XCL1P47992 114 aa11.78□□□□□ -0.52
RNF4-209ENST00000507784 NFE4Q86UQ8 179 aa11.78□□□□□ -0.52
RNF4-209ENST00000507784 Q9HAA7 133 aa11.78□□□□□ -0.52
RNF4-209ENST00000507784 STARD9Q9P2P6 4700 aa11.78□□□□□ -0.52
RNF4-209ENST00000507784 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.53
RNF4-209ENST00000507784 HERVK_113P63121 156 aa11.77□□□□□ -0.53
RNF4-209ENST00000507784 MIAQ16674 131 aa11.77□□□□□ -0.53
RNF4-209ENST00000507784 FAM19A3Q7Z5A8 133 aa11.77□□□□□ -0.53
RNF4-209ENST00000507784 LINC00469Q8N7U9 141 aa11.77□□□□□ -0.53
RNF4-209ENST00000507784 CHCHD10Q8WYQ3 142 aaPredicted RBP11.77□□□□□ -0.53
RNF4-209ENST00000507784 CSMD3Q7Z407 3707 aa11.76□□□□□ -0.53
RNF4-209ENST00000507784 IGKV2D-24A0A075B6R9 120 aa11.75□□□□□ -0.53
RNF4-209ENST00000507784 TRAV8-4A0A0B4J246 113 aa11.75□□□□□ -0.53
RNF4-209ENST00000507784 hDV102S1A0JD36 115 aa11.75□□□□□ -0.53
RNF4-209ENST00000507784 GAGE12HA6NDE8 117 aa11.75□□□□□ -0.53
RNF4-209ENST00000507784 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
RNF4-209ENST00000507784 CDPF1Q6NVV7 123 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms