RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.49
PDLIM7-216ENST00000506537 USP17L23D6RBM5 183 aa11.96□□□□□ -0.49
PDLIM7-216ENST00000506537 CDK2AP2O75956 126 aa11.96□□□□□ -0.49
PDLIM7-216ENST00000506537 APOC3P02656 99 aa11.96□□□□□ -0.49
PDLIM7-216ENST00000506537 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.49
PDLIM7-216ENST00000506537 TCAPO15273 167 aa11.95□□□□□ -0.5
PDLIM7-216ENST00000506537 GCSHP23434 173 aa11.95□□□□□ -0.5
PDLIM7-216ENST00000506537 S100PP25815 95 aa11.95□□□□□ -0.5
PDLIM7-216ENST00000506537 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
PDLIM7-216ENST00000506537 LAMTOR2Q9Y2Q5 125 aa11.95□□□□□ -0.5
PDLIM7-216ENST00000506537 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
PDLIM7-216ENST00000506537 CDC42SE2Q9NRR3 84 aa11.94□□□□□ -0.5
PDLIM7-216ENST00000506537 PRSS47A8MTI9 375 aa11.93□□□□□ -0.5
PDLIM7-216ENST00000506537 RPL39P62891 51 aaKnown RBP11.93□□□□□ -0.5
PDLIM7-216ENST00000506537 LOC389332A0A1B0GUA5 103 aa11.92□□□□□ -0.5
PDLIM7-216ENST00000506537 KIAA1644Q3SXP7 199 aa11.92□□□□□ -0.5
PDLIM7-216ENST00000506537 SVBPQ8N300 66 aa11.92□□□□□ -0.5
PDLIM7-216ENST00000506537 ZNF664Q8N3J9 261 aa11.92□□□□□ -0.5
PDLIM7-216ENST00000506537 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
PDLIM7-216ENST00000506537 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
PDLIM7-216ENST00000506537 PRSS1P07477 247 aa11.91□□□□□ -0.5
PDLIM7-216ENST00000506537 NDUFA5Q16718 116 aa11.91□□□□□ -0.5
PDLIM7-216ENST00000506537 Q6ZUT4 128 aa11.91□□□□□ -0.5
PDLIM7-216ENST00000506537 CHCHD10Q8WYQ3 142 aaPredicted RBP11.91□□□□□ -0.5
PDLIM7-216ENST00000506537 CSDC2Q9Y534 153 aaKnown RBP11.91□□□□□ -0.5
PDLIM7-216ENST00000506537 LINC00959A0A1B0GUT2 108 aa11.9□□□□□ -0.5
PDLIM7-216ENST00000506537 SNAPINO95295 136 aa11.9□□□□□ -0.5
PDLIM7-216ENST00000506537 C14orf177Q52M58 125 aa11.9□□□□□ -0.5
PDLIM7-216ENST00000506537 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-216ENST00000506537 FAM104AQ969W3 186 aa11.9□□□□□ -0.5
PDLIM7-216ENST00000506537 TIMM21Q9BVV7 248 aa11.9□□□□□ -0.5
PDLIM7-216ENST00000506537 GNB1LQ9BYB4 327 aa11.9□□□□□ -0.5
PDLIM7-216ENST00000506537 LINC01620Q4KN68 170 aa11.89□□□□□ -0.51
PDLIM7-216ENST00000506537 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
PDLIM7-216ENST00000506537 Q8N8P6 123 aa11.89□□□□□ -0.51
PDLIM7-216ENST00000506537 TMEM18Q96B42 140 aa11.89□□□□□ -0.51
PDLIM7-216ENST00000506537 TGIF2-C20orf24A0A0A6YYL0 155 aa11.88□□□□□ -0.51
PDLIM7-216ENST00000506537 XGP55808 180 aa11.88□□□□□ -0.51
PDLIM7-216ENST00000506537 FOXI1Q12951 378 aa11.88□□□□□ -0.51
PDLIM7-216ENST00000506537 SLC7A5P1Q8MH63 180 aa11.88□□□□□ -0.51
PDLIM7-216ENST00000506537 CCL25O15444 150 aa11.87□□□□□ -0.51
PDLIM7-216ENST00000506537 RAB5AP20339 215 aa11.87□□□□□ -0.51
PDLIM7-216ENST00000506537 XCL1P47992 114 aa11.87□□□□□ -0.51
PDLIM7-216ENST00000506537 SMAGPQ0VAQ4 97 aa11.87□□□□□ -0.51
PDLIM7-216ENST00000506537 C15orf56Q8N910 161 aa11.87□□□□□ -0.51
PDLIM7-216ENST00000506537 COX19Q49B96 90 aa11.86□□□□□ -0.51
PDLIM7-216ENST00000506537 OPRPNQ99935 248 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-216ENST00000506537 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
PDLIM7-216ENST00000506537 FAM30AQ9NZY2 134 aa11.86□□□□□ -0.51
PDLIM7-216ENST00000506537 IFI27P40305 119 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-216ENST00000506537 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
PDLIM7-216ENST00000506537 ABCA13Q86UQ4 5058 aa11.84□□□□□ -0.51
PDLIM7-216ENST00000506537 MT-ND6P03923 174 aa11.84□□□□□ -0.51
PDLIM7-216ENST00000506537 HAMPP81172 84 aa11.84□□□□□ -0.51
PDLIM7-216ENST00000506537 SS18Q15532 418 aa11.84□□□□□ -0.51
PDLIM7-216ENST00000506537 ALKBH7Q9BT30 221 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-216ENST00000506537 FAT1Q14517 4588 aa11.83□□□□□ -0.52
PDLIM7-216ENST00000506537 hDV102S1A0JD36 115 aa11.83□□□□□ -0.52
PDLIM7-216ENST00000506537 MRPS36P82909 103 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-216ENST00000506537 Q6ZSA8 131 aa11.83□□□□□ -0.52
PDLIM7-216ENST00000506537 YPEL4Q96NS1 127 aa11.83□□□□□ -0.52
PDLIM7-216ENST00000506537 NXT2Q9NPJ8 142 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-216ENST00000506537 TRAV13-1A0A0B4J241 112 aa11.82□□□□□ -0.52
PDLIM7-216ENST00000506537 FABP9Q0Z7S8 132 aa11.82□□□□□ -0.52
PDLIM7-216ENST00000506537 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
PDLIM7-216ENST00000506537 SLPIP03973 132 aa11.81□□□□□ -0.52
PDLIM7-216ENST00000506537 ORMDL2Q53FV1 153 aa11.81□□□□□ -0.52
PDLIM7-216ENST00000506537 KRTAP4-5Q9BYR2 181 aa11.81□□□□□ -0.52
PDLIM7-216ENST00000506537 PYGO1Q9Y3Y4 419 aa11.81□□□□□ -0.52
PDLIM7-216ENST00000506537 IGLV4-3A0A075B6K6 122 aa11.8□□□□□ -0.52
PDLIM7-216ENST00000506537 C1orf196B1AJZ1 125 aa11.8□□□□□ -0.52
PDLIM7-216ENST00000506537 K7EMI3 77 aa11.8□□□□□ -0.52
PDLIM7-216ENST00000506537 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
PDLIM7-216ENST00000506537 HIGD2BQ4VC39 106 aa11.8□□□□□ -0.52
PDLIM7-216ENST00000506537 C2orf66Q6UXQ4 117 aa11.8□□□□□ -0.52
PDLIM7-216ENST00000506537 CYSLTR1Q9Y271 337 aa11.8□□□□□ -0.52
PDLIM7-216ENST00000506537 GVQW2A0A096LPI5 108 aaPredicted RBP11.79□□□□□ -0.52
PDLIM7-216ENST00000506537 CFAP161Q6P656 301 aa11.79□□□□□ -0.52
PDLIM7-216ENST00000506537 C9orf163Q8N9P6 203 aa11.79□□□□□ -0.52
PDLIM7-216ENST00000506537 VPS13BQ7Z7G8 4022 aa11.79□□□□□ -0.52
PDLIM7-216ENST00000506537 LINC01546A6NGU7 62 aa11.78□□□□□ -0.52
PDLIM7-216ENST00000506537 CBLN2Q8IUK8 224 aa11.78□□□□□ -0.52
PDLIM7-216ENST00000506537 Q8N1X5 172 aa11.78□□□□□ -0.52
PDLIM7-216ENST00000506537 TRAPPC1Q9Y5R8 145 aa11.78□□□□□ -0.52
PDLIM7-216ENST00000506537 IFITM10A6NMD0 228 aa11.77□□□□□ -0.53
PDLIM7-216ENST00000506537 IGHV1-58A0A0C4DH39 117 aa11.76□□□□□ -0.53
PDLIM7-216ENST00000506537 IGIPA6NJ69 53 aa11.76□□□□□ -0.53
PDLIM7-216ENST00000506537 LINC00173Q6ZV60 143 aa11.76□□□□□ -0.53
PDLIM7-216ENST00000506537 PRSS3P2Q8NHM4 247 aa11.76□□□□□ -0.53
PDLIM7-216ENST00000506537 TMEM141Q96I45 108 aa11.76□□□□□ -0.53
PDLIM7-216ENST00000506537 AP5S1Q9NUS5 200 aa11.76□□□□□ -0.53
PDLIM7-216ENST00000506537 COX7A2LO14548 114 aa11.75□□□□□ -0.53
PDLIM7-216ENST00000506537 ZC2HC1BQ5TFG8 222 aa11.75□□□□□ -0.53
PDLIM7-216ENST00000506537 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
PDLIM7-216ENST00000506537 TOMM6Q96B49 74 aa11.74□□□□□ -0.53
PDLIM7-216ENST00000506537 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
PDLIM7-216ENST00000506537 SDIM1Q6ZPB5 146 aa11.73□□□□□ -0.53
PDLIM7-216ENST00000506537 SCXQ7RTU7 201 aa11.73□□□□□ -0.53
PDLIM7-216ENST00000506537 C18orf32Q8TCD1 76 aa11.73□□□□□ -0.53
PDLIM7-216ENST00000506537 AMELXQ99217 191 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms