RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DAZ2Q13117 558 aaKnown RBP11.63□□□□□ -0.55
SCLT1-208ENST00000506368 DAZ4Q86SG3 579 aaKnown RBP11.63□□□□□ -0.55
SCLT1-208ENST00000506368 SMCR5Q8TEV8 140 aa11.63□□□□□ -0.55
SCLT1-208ENST00000506368 UBTD1Q9HAC8 227 aa11.63□□□□□ -0.55
SCLT1-208ENST00000506368 DAZ3Q9NR90 486 aaKnown RBP11.63□□□□□ -0.55
SCLT1-208ENST00000506368 MAP1AP78559 2803 aaPredicted RBP11.63□□□□□ -0.55
SCLT1-208ENST00000506368 PRRC2AP48634 2157 aaKnown RBP11.62□□□□□ -0.55
SCLT1-208ENST00000506368 PF4P02776 101 aa11.62□□□□□ -0.55
SCLT1-208ENST00000506368 OR13C6PQ8NH95 151 aa11.62□□□□□ -0.55
SCLT1-208ENST00000506368 WNK2Q9Y3S1 2297 aa11.62□□□□□ -0.55
SCLT1-208ENST00000506368 IGHG2P01859 326 aa11.61□□□□□ -0.55
SCLT1-208ENST00000506368 BEAN1Q3B7T3 259 aa11.61□□□□□ -0.55
SCLT1-208ENST00000506368 GAGE2AQ6NT46 116 aa11.61□□□□□ -0.55
SCLT1-208ENST00000506368 CEMP1Q6PRD7 247 aaPredicted RBP11.61□□□□□ -0.55
SCLT1-208ENST00000506368 SETXQ7Z333 2677 aaKnown RBP11.61□□□□□ -0.55
SCLT1-208ENST00000506368 Q6ZSV7 163 aa11.61□□□□□ -0.55
SCLT1-208ENST00000506368 IGKV3-7A0A075B6H7 116 aa11.6□□□□□ -0.55
SCLT1-208ENST00000506368 BAALC-AS2P0C853 105 aa11.6□□□□□ -0.55
SCLT1-208ENST00000506368 DUX5Q96PT3 197 aa11.6□□□□□ -0.55
SCLT1-208ENST00000506368 NPC2P61916 151 aa11.59□□□□□ -0.55
SCLT1-208ENST00000506368 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
SCLT1-208ENST00000506368 FAM19A3Q7Z5A8 133 aa11.59□□□□□ -0.55
SCLT1-208ENST00000506368 C2orf48Q96LS8 159 aa11.59□□□□□ -0.55
SCLT1-208ENST00000506368 CHCHD7Q9BUK0 85 aa11.59□□□□□ -0.55
SCLT1-208ENST00000506368 PDZD2O15018 2839 aa11.59□□□□□ -0.55
SCLT1-208ENST00000506368 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.56
SCLT1-208ENST00000506368 TMEM258P61165 79 aa11.58□□□□□ -0.56
SCLT1-208ENST00000506368 WIPF1O43516 503 aa11.58□□□□□ -0.56
SCLT1-208ENST00000506368 IGLV1-40P01703 118 aa11.58□□□□□ -0.56
SCLT1-208ENST00000506368 C3orf56Q8N813 242 aa11.57□□□□□ -0.56
SCLT1-208ENST00000506368 ANKRD17O75179 2603 aaKnown RBP11.57□□□□□ -0.56
SCLT1-208ENST00000506368 IGHV3-11P01762 117 aa11.56□□□□□ -0.56
SCLT1-208ENST00000506368 K7EQG2 157 aa11.55□□□□□ -0.56
SCLT1-208ENST00000506368 RPL18AQ02543 176 aaKnown RBP11.55□□□□□ -0.56
SCLT1-208ENST00000506368 FAM19A5Q7Z5A7 132 aaPredicted RBP11.55□□□□□ -0.56
SCLT1-208ENST00000506368 CDKN2A-AS1Q9UH64 79 aa11.55□□□□□ -0.56
SCLT1-208ENST00000506368 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
SCLT1-208ENST00000506368 LMO4P61968 165 aa11.55□□□□□ -0.56
SCLT1-208ENST00000506368 HIST2H2BDQ6DRA6 164 aa11.55□□□□□ -0.56
SCLT1-208ENST00000506368 PIMREGQ9BSJ6 248 aa11.55□□□□□ -0.56
SCLT1-208ENST00000506368 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
SCLT1-208ENST00000506368 MALP21145 153 aa11.54□□□□□ -0.56
SCLT1-208ENST00000506368 RPL28P46779 137 aaKnown RBP11.54□□□□□ -0.56
SCLT1-208ENST00000506368 Q6JHZ5 121 aa11.54□□□□□ -0.56
SCLT1-208ENST00000506368 Q9H8V8 135 aa11.54□□□□□ -0.56
SCLT1-208ENST00000506368 A8MZ25 164 aa11.53□□□□□ -0.56
SCLT1-208ENST00000506368 SPINK13Q1W4C9 94 aa11.53□□□□□ -0.56
SCLT1-208ENST00000506368 NOTCH2Q04721 2471 aa11.53□□□□□ -0.56
SCLT1-208ENST00000506368 CELSR1Q9NYQ6 3014 aa11.52□□□□□ -0.56
SCLT1-208ENST00000506368 CYSRT1A8MQ03 144 aa11.52□□□□□ -0.57
SCLT1-208ENST00000506368 AKAP9Q99996 3911 aa11.52□□□□□ -0.57
SCLT1-208ENST00000506368 IGHV3OR16-10A0A075B7F0 116 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 DNAL4O96015 105 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 SERP2Q8N6R1 65 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 CCL19Q99731 98 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 NAV2Q8IVL1 2488 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 CFHR3Q02985 330 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 DGAT2L7PQ6IED9 249 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
SCLT1-208ENST00000506368 ZNF469Q96JG9 3925 aaPredicted RBP11.5□□□□□ -0.57
SCLT1-208ENST00000506368 LOC107984640A0A0U1RRK4 108 aa11.5□□□□□ -0.57
SCLT1-208ENST00000506368 TMEM89A2RUT3 159 aa11.5□□□□□ -0.57
SCLT1-208ENST00000506368 A6NDX4 124 aa11.5□□□□□ -0.57
SCLT1-208ENST00000506368 RNASE13Q5GAN3 156 aaKnown RBP11.5□□□□□ -0.57
SCLT1-208ENST00000506368 LINC00467Q9BRT7 94 aa11.5□□□□□ -0.57
SCLT1-208ENST00000506368 IGHV3-53P01767 116 aa11.5□□□□□ -0.57
SCLT1-208ENST00000506368 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
SCLT1-208ENST00000506368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-208ENST00000506368 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-208ENST00000506368 H0YGX0 51 aa11.48□□□□□ -0.57
SCLT1-208ENST00000506368 Q8N2B8 174 aa11.48□□□□□ -0.57
SCLT1-208ENST00000506368 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
SCLT1-208ENST00000506368 SOSTDC1Q6X4U4 206 aa11.48□□□□□ -0.57
SCLT1-208ENST00000506368 OBSCN-AS1Q96MR7 158 aa11.48□□□□□ -0.57
SCLT1-208ENST00000506368 A8MTW9 85 aa11.47□□□□□ -0.57
SCLT1-208ENST00000506368 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
SCLT1-208ENST00000506368 TEX15Q9BXT5 2789 aa11.47□□□□□ -0.57
SCLT1-208ENST00000506368 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
SCLT1-208ENST00000506368 CRPP02741 224 aa11.47□□□□□ -0.57
SCLT1-208ENST00000506368 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
SCLT1-208ENST00000506368 BPESC1Q9GZL8 116 aa11.47□□□□□ -0.57
SCLT1-208ENST00000506368 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
SCLT1-208ENST00000506368 hADV29S1A0JD25 119 aa11.46□□□□□ -0.57
SCLT1-208ENST00000506368 S100A7L2Q5SY68 101 aa11.46□□□□□ -0.57
SCLT1-208ENST00000506368 DPH3Q96FX2 82 aa11.45□□□□□ -0.58
SCLT1-208ENST00000506368 FAM218AQ96MZ4 157 aa11.45□□□□□ -0.58
SCLT1-208ENST00000506368 IGHV3OR16-12A0A075B7B8 117 aa11.45□□□□□ -0.58
SCLT1-208ENST00000506368 NDUFC2-KCTD14E9PQ53 114 aa11.45□□□□□ -0.58
SCLT1-208ENST00000506368 IGHV3-73A0A0B4J1V6 119 aa11.44□□□□□ -0.58
SCLT1-208ENST00000506368 PROK1P58294 105 aa11.44□□□□□ -0.58
SCLT1-208ENST00000506368 OTOGQ6ZRI0 2925 aa11.44□□□□□ -0.58
SCLT1-208ENST00000506368 ATP5J2P56134 94 aa11.44□□□□□ -0.58
SCLT1-208ENST00000506368 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.44□□□□□ -0.58
SCLT1-208ENST00000506368 UPK3BQ9BT76 320 aa11.44□□□□□ -0.58
SCLT1-208ENST00000506368 SVEP1Q4LDE5 3571 aa11.43□□□□□ -0.58
SCLT1-208ENST00000506368 MYO9AB2RTY4 2548 aa11.43□□□□□ -0.58
SCLT1-208ENST00000506368 PSMB8P28062 276 aa11.43□□□□□ -0.58
SCLT1-208ENST00000506368 COX6A2Q02221 97 aa11.43□□□□□ -0.58
SCLT1-208ENST00000506368 DEFB113Q30KQ7 82 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms