RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PMCHP20382 165 aa8.27□□□□□ -1.09
DDX41-204ENST00000504807 XCL1P47992 114 aa8.27□□□□□ -1.09
DDX41-204ENST00000504807 NRACQ8N912 160 aa8.27□□□□□ -1.09
DDX41-204ENST00000504807 NUP35Q8NFH5 326 aa8.27□□□□□ -1.09
DDX41-204ENST00000504807 OR5A1Q8NGJ0 315 aa8.27□□□□□ -1.09
DDX41-204ENST00000504807 ISOC2Q96AB3 205 aa8.27□□□□□ -1.09
DDX41-204ENST00000504807 H7C423 109 aa8.26□□□□□ -1.09
DDX41-204ENST00000504807 CCL25O15444 150 aa8.26□□□□□ -1.09
DDX41-204ENST00000504807 RPL23P62829 140 aaKnown RBP8.26□□□□□ -1.09
DDX41-204ENST00000504807 SMIM15Q7Z3B0 74 aa8.26□□□□□ -1.09
DDX41-204ENST00000504807 ST20Q9HBF5 79 aa8.26□□□□□ -1.09
DDX41-204ENST00000504807 PLAC8Q9NZF1 115 aa8.26□□□□□ -1.09
DDX41-204ENST00000504807 A0A096LNI7 61 aa8.25□□□□□ -1.09
DDX41-204ENST00000504807 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
DDX41-204ENST00000504807 PHOX2AO14813 284 aa8.25□□□□□ -1.09
DDX41-204ENST00000504807 NDUFS6O75380 124 aaKnown RBP8.25□□□□□ -1.09
DDX41-204ENST00000504807 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
DDX41-204ENST00000504807 TEX261Q6UWH6 196 aa8.25□□□□□ -1.09
DDX41-204ENST00000504807 CDC42SE2Q9NRR3 84 aa8.25□□□□□ -1.09
DDX41-204ENST00000504807 AP5S1Q9NUS5 200 aa8.25□□□□□ -1.09
DDX41-204ENST00000504807 MUC2Q02817 5179 aa8.24□□□□□ -1.09
DDX41-204ENST00000504807 IGKV2-24A0A0C4DH68 120 aa8.24□□□□□ -1.09
DDX41-204ENST00000504807 ZNF25P17030 456 aaPredicted RBP8.24□□□□□ -1.09
DDX41-204ENST00000504807 ODF1Q14990 250 aa8.24□□□□□ -1.09
DDX41-204ENST00000504807 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
DDX41-204ENST00000504807 FAM104AQ969W3 186 aa8.24□□□□□ -1.09
DDX41-204ENST00000504807 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.23□□□□□ -1.09
DDX41-204ENST00000504807 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
DDX41-204ENST00000504807 MAJINQ3KP22 176 aa8.22□□□□□ -1.09
DDX41-204ENST00000504807 MRPL51Q4U2R6 128 aaKnown RBP8.22□□□□□ -1.09
DDX41-204ENST00000504807 CFAP161Q6P656 301 aa8.22□□□□□ -1.09
DDX41-204ENST00000504807 BORCS7Q96B45 105 aa8.22□□□□□ -1.09
DDX41-204ENST00000504807 UBE2D4Q9Y2X8 147 aa8.22□□□□□ -1.09
DDX41-204ENST00000504807 SMIM27A0A1W2PRY6 76 aa8.21□□□□□ -1.1
DDX41-204ENST00000504807 ADIRFQ15847 76 aa8.21□□□□□ -1.1
DDX41-204ENST00000504807 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
DDX41-204ENST00000504807 Q6ZUT4 128 aa8.21□□□□□ -1.1
DDX41-204ENST00000504807 ZNF664Q8N3J9 261 aa8.21□□□□□ -1.1
DDX41-204ENST00000504807 DPH3Q96FX2 82 aa8.21□□□□□ -1.1
DDX41-204ENST00000504807 C7orf77A4D0Y5 90 aa8.2□□□□□ -1.1
DDX41-204ENST00000504807 FAM74A3Q4VXF1 159 aa8.2□□□□□ -1.1
DDX41-204ENST00000504807 FAM104BQ5XKR9 115 aa8.2□□□□□ -1.1
DDX41-204ENST00000504807 STPG4Q8N801 248 aa8.2□□□□□ -1.1
DDX41-204ENST00000504807 TMEM101Q96IK0 257 aa8.2□□□□□ -1.1
DDX41-204ENST00000504807 NAT8BQ9UHF3 227 aa8.2□□□□□ -1.1
DDX41-204ENST00000504807 LPAP08519 4548 aa8.2□□□□□ -1.1
DDX41-204ENST00000504807 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
DDX41-204ENST00000504807 CAMPP49913 170 aa8.19□□□□□ -1.1
DDX41-204ENST00000504807 SUMO2P61956 95 aaKnown RBP8.19□□□□□ -1.1
DDX41-204ENST00000504807 PRR3P79522 188 aaKnown RBP8.19□□□□□ -1.1
DDX41-204ENST00000504807 RIGQ13278 110 aa8.19□□□□□ -1.1
DDX41-204ENST00000504807 CD164L2Q6UWJ8 174 aa8.19□□□□□ -1.1
DDX41-204ENST00000504807 BTF3L4Q96K17 158 aa8.19□□□□□ -1.1
DDX41-204ENST00000504807 A0A1B0GXF2 115 aa8.18□□□□□ -1.1
DDX41-204ENST00000504807 VCYO14598 125 aa8.18□□□□□ -1.1
DDX41-204ENST00000504807 RPL39P62891 51 aaKnown RBP8.18□□□□□ -1.1
DDX41-204ENST00000504807 Q6ZRU5 148 aa8.18□□□□□ -1.1
DDX41-204ENST00000504807 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
DDX41-204ENST00000504807 NAT8Q9UHE5 227 aa8.18□□□□□ -1.1
DDX41-204ENST00000504807 IGLV4-69A0A075B6H9 119 aa8.17□□□□□ -1.1
DDX41-204ENST00000504807 FCER1GP30273 86 aa8.17□□□□□ -1.1
DDX41-204ENST00000504807 SS18Q15532 418 aa8.17□□□□□ -1.1
DDX41-204ENST00000504807 CARD19Q96LW7 228 aa8.17□□□□□ -1.1
DDX41-204ENST00000504807 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
DDX41-204ENST00000504807 NPYP01303 97 aa8.16□□□□□ -1.1
DDX41-204ENST00000504807 MRPL54Q6P161 138 aaKnown RBP8.16□□□□□ -1.1
DDX41-204ENST00000504807 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
DDX41-204ENST00000504807 TRBV24-1A0A075B6N3 115 aa8.15□□□□□ -1.1
DDX41-204ENST00000504807 A0A1W2PNN7 141 aa8.15□□□□□ -1.1
DDX41-204ENST00000504807 D6R8Y8 96 aa8.15□□□□□ -1.1
DDX41-204ENST00000504807 TNFRSF6BO95407 300 aa8.15□□□□□ -1.1
DDX41-204ENST00000504807 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
DDX41-204ENST00000504807 C5orf38Q86SI9 138 aa8.15□□□□□ -1.1
DDX41-204ENST00000504807 A0A0J9YXV3 536 aa8.14□□□□□ -1.11
DDX41-204ENST00000504807 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.13□□□□□ -1.11
DDX41-204ENST00000504807 TCAPO15273 167 aa8.13□□□□□ -1.11
DDX41-204ENST00000504807 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
DDX41-204ENST00000504807 PEA15Q15121 130 aa8.13□□□□□ -1.11
DDX41-204ENST00000504807 C7orf33Q8WU49 177 aa8.13□□□□□ -1.11
DDX41-204ENST00000504807 C20orf78Q9BR46 151 aa8.13□□□□□ -1.11
DDX41-204ENST00000504807 TIMM21Q9BVV7 248 aa8.13□□□□□ -1.11
DDX41-204ENST00000504807 SMIM2Q9BVW6 85 aa8.13□□□□□ -1.11
DDX41-204ENST00000504807 FSIP2Q5CZC0 6907 aa8.12□□□□□ -1.11
DDX41-204ENST00000504807 C1orf196B1AJZ1 125 aa8.12□□□□□ -1.11
DDX41-204ENST00000504807 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
DDX41-204ENST00000504807 COX7A2LO14548 114 aa8.12□□□□□ -1.11
DDX41-204ENST00000504807 CKS2P33552 79 aa8.12□□□□□ -1.11
DDX41-204ENST00000504807 RPL32P62910 135 aaKnown RBP8.12□□□□□ -1.11
DDX41-204ENST00000504807 KIR2DL4Q99706 377 aa8.12□□□□□ -1.11
DDX41-204ENST00000504807 LINC00862A6NCI5 91 aa8.11□□□□□ -1.11
DDX41-204ENST00000504807 PPP1R2P9O14990 202 aa8.11□□□□□ -1.11
DDX41-204ENST00000504807 HBBP68871 147 aa8.11□□□□□ -1.11
DDX41-204ENST00000504807 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
DDX41-204ENST00000504807 SRSF9Q13242 221 aaKnown RBP eCLIP8.11□□□□□ -1.11
DDX41-204ENST00000504807 C10orf25Q5T742 122 aa8.11□□□□□ -1.11
DDX41-204ENST00000504807 PPP1R17O96001 155 aa8.1□□□□□ -1.11
DDX41-204ENST00000504807 KRTAP11-1Q8IUC1 163 aa8.1□□□□□ -1.11
DDX41-204ENST00000504807 LINC01600Q96MT4 127 aa8.1□□□□□ -1.11
DDX41-204ENST00000504807 IGHV3OR16-9A0A0B4J2B5 98 aa8.09□□□□□ -1.11
DDX41-204ENST00000504807 A0A1B0GW15 77 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms