RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 SPANXB1Q9NS25 103 aaPredicted RBP15.99■□□□□ 0.15
PCDH1-204ENST00000503492 LINC00694P0DN24 101 aa15.98■□□□□ 0.15
PCDH1-204ENST00000503492 IGHV3-30-3P0DP02 117 aa15.98■□□□□ 0.15
PCDH1-204ENST00000503492 CRLF1O75462 422 aa15.97■□□□□ 0.15
PCDH1-204ENST00000503492 INSL3P51460 131 aa15.97■□□□□ 0.15
PCDH1-204ENST00000503492 UBE2D1P51668 147 aa15.97■□□□□ 0.15
PCDH1-204ENST00000503492 TRAV8-3A0A0A6YYJ7 113 aa15.97■□□□□ 0.15
PCDH1-204ENST00000503492 C9orf66Q5T8R8 295 aa15.97■□□□□ 0.15
PCDH1-204ENST00000503492 DGAT2L7PQ6IED9 249 aa15.97■□□□□ 0.15
PCDH1-204ENST00000503492 LOC100131303A0A0U1RQF7 123 aa15.96■□□□□ 0.15
PCDH1-204ENST00000503492 FOSL1P15407 271 aa15.96■□□□□ 0.15
PCDH1-204ENST00000503492 IGHV3-30P01768 117 aa15.95■□□□□ 0.14
PCDH1-204ENST00000503492 IGHV3-30-5P0DP03 117 aa15.95■□□□□ 0.14
PCDH1-204ENST00000503492 TMEM238LA0A1B0GVL6 79 aa15.95■□□□□ 0.14
PCDH1-204ENST00000503492 TRBV6-4A0A1B0GX49 114 aa15.95■□□□□ 0.14
PCDH1-204ENST00000503492 A6NJY4 79 aa15.95■□□□□ 0.14
PCDH1-204ENST00000503492 CIDEAO60543 219 aa15.95■□□□□ 0.14
PCDH1-204ENST00000503492 SBSPONQ8IVN8 264 aa15.95■□□□□ 0.14
PCDH1-204ENST00000503492 HIVEP1P15822 2718 aa15.95■□□□□ 0.14
PCDH1-204ENST00000503492 C10orf126Q8N4M7 172 aa15.94■□□□□ 0.14
PCDH1-204ENST00000503492 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.94■□□□□ 0.14
PCDH1-204ENST00000503492 IGHV1-58A0A0C4DH39 117 aa15.94■□□□□ 0.14
PCDH1-204ENST00000503492 TRGV4A0A0C4DH28 118 aa15.93■□□□□ 0.14
PCDH1-204ENST00000503492 FHL2Q14192 279 aa15.93■□□□□ 0.14
PCDH1-204ENST00000503492 CITED1Q99966 193 aa15.92■□□□□ 0.14
PCDH1-204ENST00000503492 GEMIN7Q9H840 131 aaKnown RBP15.92■□□□□ 0.14
PCDH1-204ENST00000503492 SPINK8P0C7L1 97 aa15.92■□□□□ 0.14
PCDH1-204ENST00000503492 VSIG2Q96IQ7 327 aa15.91■□□□□ 0.14
PCDH1-204ENST00000503492 CSDC2Q9Y534 153 aaKnown RBP15.91■□□□□ 0.14
PCDH1-204ENST00000503492 TIRAPP58753 221 aa15.91■□□□□ 0.14
PCDH1-204ENST00000503492 GTSF1LQ9H1H1 148 aa15.91■□□□□ 0.14
PCDH1-204ENST00000503492 CDKN2A-AS1Q9UH64 79 aa15.9■□□□□ 0.14
PCDH1-204ENST00000503492 A0A0J9YXY3 114 aa15.9■□□□□ 0.14
PCDH1-204ENST00000503492 A8MZ25 164 aa15.9■□□□□ 0.14
PCDH1-204ENST00000503492 X6R8D5 127 aa15.9■□□□□ 0.14
PCDH1-204ENST00000503492 IGLV5-45A0A087WSX0 123 aa15.89■□□□□ 0.13
PCDH1-204ENST00000503492 COX6A2Q02221 97 aa15.89■□□□□ 0.13
PCDH1-204ENST00000503492 APOMO95445 188 aa15.89■□□□□ 0.13
PCDH1-204ENST00000503492 PGPEP1Q9NXJ5 209 aa15.89■□□□□ 0.13
PCDH1-204ENST00000503492 KIR2DL5BQ8NHK3 375 aa15.88■□□□□ 0.13
PCDH1-204ENST00000503492 VWFP04275 2813 aa15.87■□□□□ 0.13
PCDH1-204ENST00000503492 DEFB130BP0DP73 79 aa15.87■□□□□ 0.13
PCDH1-204ENST00000503492 DEFB130AP0DP74 79 aa15.87■□□□□ 0.13
PCDH1-204ENST00000503492 LINC00242Q5T6M2 205 aa15.87■□□□□ 0.13
PCDH1-204ENST00000503492 TMEM243Q9BU79 118 aa15.87■□□□□ 0.13
PCDH1-204ENST00000503492 LINC00612Q8N6U2 182 aa15.87■□□□□ 0.13
PCDH1-204ENST00000503492 CDC42SE2Q9NRR3 84 aa15.87■□□□□ 0.13
PCDH1-204ENST00000503492 NDUFA12Q9UI09 145 aa15.86■□□□□ 0.13
PCDH1-204ENST00000503492 CFC1BP0CG36 223 aa15.86■□□□□ 0.13
PCDH1-204ENST00000503492 CFC1P0CG37 223 aa15.86■□□□□ 0.13
PCDH1-204ENST00000503492 TMEM238C9JI98 176 aa15.85■□□□□ 0.13
PCDH1-204ENST00000503492 FAM19A3Q7Z5A8 133 aa15.85■□□□□ 0.13
PCDH1-204ENST00000503492 LITAFQ99732 161 aa15.84■□□□□ 0.13
PCDH1-204ENST00000503492 TENM1Q9UKZ4 2725 aa15.84■□□□□ 0.13
PCDH1-204ENST00000503492 UBE2L6O14933 153 aa15.84■□□□□ 0.13
PCDH1-204ENST00000503492 TSPAN13O95857 204 aa15.84■□□□□ 0.13
PCDH1-204ENST00000503492 HERVK_113P63121 156 aa15.84■□□□□ 0.13
PCDH1-204ENST00000503492 OCIAD2Q56VL3 154 aa15.84■□□□□ 0.13
PCDH1-204ENST00000503492 MUSTN1Q8IVN3 82 aa15.84■□□□□ 0.13
PCDH1-204ENST00000503492 TRAV13-1A0A0B4J241 112 aa15.83■□□□□ 0.12
PCDH1-204ENST00000503492 SMIM9A6NGZ8 99 aa15.83■□□□□ 0.12
PCDH1-204ENST00000503492 SMAGPQ0VAQ4 97 aa15.83■□□□□ 0.12
PCDH1-204ENST00000503492 TMEM101Q96IK0 257 aa15.83■□□□□ 0.12
PCDH1-204ENST00000503492 A4D1N5 150 aa15.83■□□□□ 0.12
PCDH1-204ENST00000503492 ZFAND6Q6FIF0 208 aa15.83■□□□□ 0.12
PCDH1-204ENST00000503492 H7C423 109 aa15.8■□□□□ 0.12
PCDH1-204ENST00000503492 EIF4EBP3O60516 100 aaPredicted RBP15.8■□□□□ 0.12
PCDH1-204ENST00000503492 TRBV6-8A0A0A6YYG3 113 aa15.79■□□□□ 0.12
PCDH1-204ENST00000503492 RBX1P62877 108 aa15.79■□□□□ 0.12
PCDH1-204ENST00000503492 ADAMTSL4-AS1Q5T5F5 129 aa15.79■□□□□ 0.12
PCDH1-204ENST00000503492 H3BMG7 143 aa15.79■□□□□ 0.12
PCDH1-204ENST00000503492 DEFB135Q30KP9 77 aa15.79■□□□□ 0.12
PCDH1-204ENST00000503492 IGLV5-39A0A0G2JS06 123 aa15.78■□□□□ 0.12
PCDH1-204ENST00000503492 RPL24P83731 157 aaKnown RBP15.78■□□□□ 0.12
PCDH1-204ENST00000503492 GAGE6Q13070 117 aa15.78■□□□□ 0.12
PCDH1-204ENST00000503492 WFDC9Q8NEX5 89 aa15.78■□□□□ 0.12
PCDH1-204ENST00000503492 SFTA2Q6UW10 78 aa15.78■□□□□ 0.12
PCDH1-204ENST00000503492 PRO1854Q9UHT4 67 aa15.77■□□□□ 0.12
PCDH1-204ENST00000503492 FAM222AQ5U5X8 452 aa15.77■□□□□ 0.11
PCDH1-204ENST00000503492 ATRQ13535 2644 aa15.77■□□□□ 0.11
PCDH1-204ENST00000503492 SMIM1B2RUZ4 78 aa15.76■□□□□ 0.11
PCDH1-204ENST00000503492 SPANXDQ9BXN6 97 aa15.76■□□□□ 0.11
PCDH1-204ENST00000503492 SPANXCQ9NY87 97 aa15.76■□□□□ 0.11
PCDH1-204ENST00000503492 APOC4P55056 127 aa15.76■□□□□ 0.11
PCDH1-204ENST00000503492 NDUFA1O15239 70 aa15.75■□□□□ 0.11
PCDH1-204ENST00000503492 TEP1Q99973 2627 aaKnown RBP15.75■□□□□ 0.11
PCDH1-204ENST00000503492 F5H768 121 aa15.75■□□□□ 0.11
PCDH1-204ENST00000503492 GYPEP15421 78 aa15.75■□□□□ 0.11
PCDH1-204ENST00000503492 IGLV4-60A0A075B6I1 120 aa15.74■□□□□ 0.11
PCDH1-204ENST00000503492 LOC107984156A0A0G2JMH3 177 aa15.74■□□□□ 0.11
PCDH1-204ENST00000503492 DEFB4AO15263 64 aa15.74■□□□□ 0.11
PCDH1-204ENST00000503492 ARL17AQ8IVW1 177 aa15.74■□□□□ 0.11
PCDH1-204ENST00000503492 CHCHD5Q9BSY4 110 aa15.74■□□□□ 0.11
PCDH1-204ENST00000503492 A0A0B4J2C4 111 aa15.73■□□□□ 0.11
PCDH1-204ENST00000503492 PRSS2P07478 247 aa15.73■□□□□ 0.11
PCDH1-204ENST00000503492 LYRM9A8MSI8 78 aa15.73■□□□□ 0.11
PCDH1-204ENST00000503492 MIAQ16674 131 aa15.73■□□□□ 0.11
PCDH1-204ENST00000503492 F8W1H4 67 aa15.72■□□□□ 0.11
PCDH1-204ENST00000503492 ATP6V0E2Q8NHE4 81 aa15.72■□□□□ 0.11
PCDH1-204ENST00000503492 PRO0255Q9UI72 69 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms