RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 IGHV4-4A0A075B6R2 117 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 F8VRH5 84 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 H7C1H1 209 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 ATP5G1P05496 136 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 CFHR3Q02985 330 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 DEFB121Q5J5C9 76 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 SCGB3A1Q96QR1 104 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 DPH3P1Q9H4G8 78 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 PRO1854Q9UHT4 67 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 LENEPQ9Y5L5 61 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 IGHV3-64A0A075B6Q5 118 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 TRAV12-2A0A075B6T6 113 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 TRAV12-3A0A0B4J271 114 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 A0A0U1RQV1 116 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 H3BUA1 57 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 IGHV3-33P01772 117 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 COX6B1P14854 86 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 PSMB8P28062 276 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 SUMO2P61956 95 aaKnown RBP3.81□□□□□ -1.8
CLDND1-208ENST00000503004 C5orf38Q86SI9 138 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 NEXN-AS1Q8NBZ9 246 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 DCANP1Q8TF63 244 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 PRRC2AP48634 2157 aaKnown RBP3.81□□□□□ -1.8
CLDND1-208ENST00000503004 IGHV3-30P01768 117 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 P0DMU3 169 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 FAM231AP0DMU4 169 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 FAM231CP0DMU5 169 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 IGHV3-30-5P0DP03 117 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 HIST1H4AP62805 103 aaKnown RBP3.81□□□□□ -1.8
CLDND1-208ENST00000503004 ATXN8Q156A1 80 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 TMEM170BQ5T4T1 132 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 C2orf82Q6UX34 121 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 WFDC11Q8NEX6 87 aa3.81□□□□□ -1.8
CLDND1-208ENST00000503004 BBC3Q96PG8 261 aaPredicted RBP3.81□□□□□ -1.8
CLDND1-208ENST00000503004 A0A0J9YY99 117 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 H7C423 109 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 SYNJ2BPP57105 145 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 KRTAP10-9P60411 292 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 C16orf95Q9H693 158 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 HELZ2Q9BYK8 2649 aaKnown RBP3.8□□□□□ -1.8
CLDND1-208ENST00000503004 FAM74A4Q5TZK3 123 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 LINC00482Q8N8I6 264 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 NOTCH2Q04721 2471 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 A0A096LNT2 108 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 KLLNB2CW77 178 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 H3BS24 57 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 DEFB136Q30KP8 78 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 LINC01356Q8N9X3 169 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 TMEM263Q8WUH6 116 aaKnown RBP3.8□□□□□ -1.8
CLDND1-208ENST00000503004 SPANXDQ9BXN6 97 aa3.8□□□□□ -1.8
CLDND1-208ENST00000503004 SETXQ7Z333 2677 aaKnown RBP3.79□□□□□ -1.8
CLDND1-208ENST00000503004 EPM2AB3EWF7 344 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 ATOX1O00244 68 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 TSPEAR-AS2P59090 65 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 NPC2P61916 151 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 SPINK13Q1W4C9 94 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 C2orf66Q6UXQ4 117 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 Q6ZSV7 163 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 LINC00643Q86TS7 51 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 APRG1Q8IVJ8 170 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 IGHV4OR15-8A0A075B7B6 117 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 A0A087WW49 117 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 C11orf86A6NJI1 115 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 F5H697 171 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 HTN1P15515 57 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 LINC00315P59091 139 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 FAM19A1Q7Z5A9 133 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 CLEC2BQ92478 149 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 KIF25-AS1Q9Y6Z4 181 aa3.79□□□□□ -1.8
CLDND1-208ENST00000503004 NACAE9PAV3 2078 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 K7EMT4 169 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 PRM2P04554 102 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 PRSS2P07478 247 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 ORMDL2Q53FV1 153 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 PRIMA1Q86XR5 153 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 TOMM6Q96B49 74 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 H3BT86 120 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 TRIAP1O43715 76 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 HOXD3P31249 432 aaPredicted RBP3.78□□□□□ -1.8
CLDND1-208ENST00000503004 CXCL5P42830 114 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 SNRPD3P62318 126 aaKnown RBP3.78□□□□□ -1.8
CLDND1-208ENST00000503004 RPL39P62891 51 aaKnown RBP3.78□□□□□ -1.8
CLDND1-208ENST00000503004 SUMO4Q6EEV6 95 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 SDIM1Q6ZPB5 146 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 TP53TG1Q9Y2A0 90 aa3.78□□□□□ -1.8
CLDND1-208ENST00000503004 TRAV12-1A0A0B4J245 112 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 A0A0J9YX75 114 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 VCYO14598 125 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 DSCR9P59020 149 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 FHL2Q14192 279 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 MUSTN1Q8IVN3 82 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 CR1P17927 2039 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 TRAV8-3A0A0A6YYJ7 113 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 SDHAF1A6NFY7 115 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 K7EQG2 157 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 TSHBP01222 138 aa3.77□□□□□ -1.81
CLDND1-208ENST00000503004 MED14OSP0DP75 135 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms