RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	PHOX2A	O14813	284 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	NPY	P01303	97 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	FABP9	Q0Z7S8	132 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	UBE2DNL	Q8IWF7	75 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	PRELID3A	Q96N28	172 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	TMEM70	Q9BUB7	260 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	GTSF1L	Q9H1H1	148 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	ST20	Q9HBF5	79 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	LINC00588	Q9Y4M8	146 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	TRAPPC1	Q9Y5R8	145 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	RYR3	Q15413	4870 aa		5.04	□□□□□ -1.6
GARNL3-222	ENST00000498801	LY6G6C	O95867	125 aa		5.03	□□□□□ -1.6
GARNL3-222	ENST00000498801	RAB5A	P20339	215 aa		5.03	□□□□□ -1.6
GARNL3-222	ENST00000498801	C20orf78	Q9BR46	151 aa		5.03	□□□□□ -1.6
GARNL3-222	ENST00000498801	LAMTOR2	Q9Y2Q5	125 aa		5.03	□□□□□ -1.6
GARNL3-222	ENST00000498801	MRPS16	Q9Y3D3	137 aa	Known RBP	5.03	□□□□□ -1.6
GARNL3-222	ENST00000498801	PLEC	Q15149	4684 aa	Known RBP	5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	TRBV6-8	A0A0A6YYG3	113 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	TRBV27	A0A0K0K1C4	114 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801		I3L3M4	83 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	PMCH	P20382	165 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	POLR2K	P53803	58 aa	Known RBP	5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	RPL32	P62910	135 aa	Known RBP	5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	COTL1	Q14019	142 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	TMEM97	Q5BJF2	176 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	LELP1	Q5T871	98 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801		Q6ZR54	194 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	NTM-AS1	Q6ZSK4	140 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	DEFB104A	Q8WTQ1	72 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	RYR2	Q92736	4967 aa		5.02	□□□□□ -1.61
GARNL3-222	ENST00000498801	ALMS1	Q8TCU4	4167 aa		5.01	□□□□□ -1.61
GARNL3-222	ENST00000498801	TRAV8-6	A0A0B4J262	113 aa		5.01	□□□□□ -1.61
GARNL3-222	ENST00000498801		K7EP13	123 aa		5.01	□□□□□ -1.61
GARNL3-222	ENST00000498801	SMIM2	Q9BVW6	85 aa		5.01	□□□□□ -1.61
GARNL3-222	ENST00000498801	MAP1LC3A	Q9H492	121 aa		5.01	□□□□□ -1.61
GARNL3-222	ENST00000498801	TRBV25-1	A0A075B6N4	114 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	IGHV1-24	A0A0C4DH33	117 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	LOC389332	A0A1B0GUA5	103 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	TRGC2	P03986	189 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	FCER1G	P30273	86 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	IQCJ	Q1A5X6	159 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	WFDC10B	Q8IUB3	73 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	PRAC1	Q96KF2	57 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	KIR2DL4	Q99706	377 aa		5	□□□□□ -1.61
GARNL3-222	ENST00000498801	IGLV2-18	A0A075B6J9	118 aa		4.99	□□□□□ -1.61
GARNL3-222	ENST00000498801	TCAP	O15273	167 aa		4.99	□□□□□ -1.61
GARNL3-222	ENST00000498801	SIVA1	O15304	175 aa		4.99	□□□□□ -1.61
GARNL3-222	ENST00000498801		Q8N8P6	123 aa		4.99	□□□□□ -1.61
GARNL3-222	ENST00000498801	CHCHD5	Q9BSY4	110 aa		4.99	□□□□□ -1.61
GARNL3-222	ENST00000498801	TMEM243	Q9BU79	118 aa		4.99	□□□□□ -1.61
GARNL3-222	ENST00000498801	CHCHD7	Q9BUK0	85 aa		4.99	□□□□□ -1.61
GARNL3-222	ENST00000498801	NXT2	Q9NPJ8	142 aa	Known RBP	4.99	□□□□□ -1.61
GARNL3-222	ENST00000498801	SACS	Q9NZJ4	4579 aa		4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801		K7EMI3	77 aa		4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801	DNAH10OS	P0CZ25	163 aa		4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801	IFI27	P40305	119 aa	Predicted RBP	4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801	TTC32	Q5I0X7	151 aa		4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801	LINC01556	Q5JQF7	62 aa		4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801	NIT1	Q86X76	327 aa		4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801	C18orf32	Q8TCD1	76 aa		4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801	DNAH1	Q9P2D7	4330 aa		4.98	□□□□□ -1.61
GARNL3-222	ENST00000498801	KMT2A	Q03164	3969 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801		A0A087WX48	190 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801		A0A087WYN8	130 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	NBDY	A0A0U1RRE5	68 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	TMEM262	E9PQX1	116 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801		H7C423	109 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	UBE2L6	O14933	153 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	IGHV3-30	P01768	117 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	IGHV3-33	P01772	117 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	IGHV3-30-3	P0DP02	117 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	IGHV3-30-5	P0DP03	117 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	ESD	P10768	282 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	PKIA	P61925	76 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	LAGE3	Q14657	143 aa		4.97	□□□□□ -1.61
GARNL3-222	ENST00000498801	TRAV9-2	A0A087WT02	112 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	LINC01546	A6NGU7	62 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	RBX1	P62877	108 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	ORMDL2	Q53FV1	153 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	MPV17L2	Q567V2	206 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	AMMECR1L	Q6DCA0	310 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	LINC00336	Q6ZUF6	198 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	FA2H	Q7L5A8	372 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801		Q8N976	141 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	C20orf203	Q8NBC4	194 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801	KRTAP1-5	Q9BYS1	174 aa		4.96	□□□□□ -1.62
GARNL3-222	ENST00000498801		M0R2N4	97 aa		4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801	LINC00614	P0C842	121 aa		4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801	FGF6	P10767	208 aa		4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801	ZNF25	P17030	456 aa	Predicted RBP	4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801	RAB5B	P61020	215 aa		4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801	RPL39	P62891	51 aa	Known RBP	4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801		Q0VG73	95 aa		4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801	RNASEK	Q6P5S7	137 aa	Known RBP	4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801	MRPL52	Q86TS9	123 aa	Known RBP	4.95	□□□□□ -1.62
GARNL3-222	ENST00000498801	BAGE3	Q86Y29	109 aa		4.95	□□□□□ -1.62

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