RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 TRAV12-1A0A0B4J245 112 aa18.44■□□□□ 0.54
HOXB3-212ENST00000498678 TIMM17AQ99595 171 aa18.43■□□□□ 0.54
HOXB3-212ENST00000498678 TMEM141Q96I45 108 aa18.42■□□□□ 0.54
HOXB3-212ENST00000498678 SPANXB1Q9NS25 103 aaPredicted RBP18.42■□□□□ 0.54
HOXB3-212ENST00000498678 GAGE12JA6NER3 117 aa18.41■□□□□ 0.54
HOXB3-212ENST00000498678 GAGE4Q13068 117 aa18.41■□□□□ 0.54
HOXB3-212ENST00000498678 GAGE5Q13069 117 aa18.41■□□□□ 0.54
HOXB3-212ENST00000498678 GAGE13Q4V321 117 aa18.41■□□□□ 0.54
HOXB3-212ENST00000498678 CHCHD7Q9BUK0 85 aa18.41■□□□□ 0.54
HOXB3-212ENST00000498678 MRPL35Q9NZE8 188 aaKnown RBP18.41■□□□□ 0.54
HOXB3-212ENST00000498678 UBE2D3P61077 147 aa18.41■□□□□ 0.54
HOXB3-212ENST00000498678 UBE2D2P62837 147 aa18.41■□□□□ 0.54
HOXB3-212ENST00000498678 ERG28Q9UKR5 140 aa18.4■□□□□ 0.54
HOXB3-212ENST00000498678 ANK2Q01484 3957 aa18.39■□□□□ 0.54
HOXB3-212ENST00000498678 LOC100131303A0A0U1RQF7 123 aa18.39■□□□□ 0.53
HOXB3-212ENST00000498678 GAGE6Q13070 117 aa18.39■□□□□ 0.53
HOXB3-212ENST00000498678 DPM2O94777 84 aa18.38■□□□□ 0.53
HOXB3-212ENST00000498678 IGKCP01834 107 aa18.38■□□□□ 0.53
HOXB3-212ENST00000498678 PRSS29PA6NIE9 313 aa18.38■□□□□ 0.53
HOXB3-212ENST00000498678 DAZ4Q86SG3 579 aaKnown RBP18.38■□□□□ 0.53
HOXB3-212ENST00000498678 DAZ3Q9NR90 486 aaKnown RBP18.38■□□□□ 0.53
HOXB3-212ENST00000498678 F8VRH5 84 aa18.37■□□□□ 0.53
HOXB3-212ENST00000498678 HHLA3Q9XRX5 114 aa18.37■□□□□ 0.53
HOXB3-212ENST00000498678 PRADC1Q9BSG0 188 aa18.36■□□□□ 0.53
HOXB3-212ENST00000498678 FGF6P10767 208 aa18.35■□□□□ 0.53
HOXB3-212ENST00000498678 OPRPNQ99935 248 aaPredicted RBP18.35■□□□□ 0.53
HOXB3-212ENST00000498678 CELA1Q9UNI1 258 aa18.35■□□□□ 0.53
HOXB3-212ENST00000498678 ZC2HC1BQ5TFG8 222 aa18.35■□□□□ 0.53
HOXB3-212ENST00000498678 SMIM13P0DJ93 91 aa18.34■□□□□ 0.53
HOXB3-212ENST00000498678 PMVKQ15126 192 aa18.34■□□□□ 0.53
HOXB3-212ENST00000498678 PYGO1Q9Y3Y4 419 aa18.34■□□□□ 0.53
HOXB3-212ENST00000498678 HERV-K104P63124 156 aa18.34■□□□□ 0.53
HOXB3-212ENST00000498678 BOD1L2Q8IYS8 172 aa18.34■□□□□ 0.53
HOXB3-212ENST00000498678 RETNQ9HD89 108 aa18.34■□□□□ 0.53
HOXB3-212ENST00000498678 DNAH3Q8TD57 4116 aa18.33■□□□□ 0.53
HOXB3-212ENST00000498678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.33■□□□□ 0.52
HOXB3-212ENST00000498678 IGKV2-29A2NJV5 120 aaPredicted RBP18.33■□□□□ 0.52
HOXB3-212ENST00000498678 PLNP26678 52 aa18.33■□□□□ 0.52
HOXB3-212ENST00000498678 NTM-AS1Q6ZSK4 140 aa18.33■□□□□ 0.52
HOXB3-212ENST00000498678 SS18L2Q9UHA2 77 aa18.33■□□□□ 0.52
HOXB3-212ENST00000498678 DAD1P61803 113 aa18.32■□□□□ 0.52
HOXB3-212ENST00000498678 SPART-AS1P0CW21 52 aa18.32■□□□□ 0.52
HOXB3-212ENST00000498678 IGLV4-3A0A075B6K6 122 aa18.31■□□□□ 0.52
HOXB3-212ENST00000498678 FAM104AQ969W3 186 aa18.31■□□□□ 0.52
HOXB3-212ENST00000498678 LINC00694P0DN24 101 aa18.31■□□□□ 0.52
HOXB3-212ENST00000498678 CEMP1Q6PRD7 247 aaPredicted RBP18.31■□□□□ 0.52
HOXB3-212ENST00000498678 UBE2D4Q9Y2X8 147 aa18.31■□□□□ 0.52
HOXB3-212ENST00000498678 PRO0255Q9UI72 69 aa18.3■□□□□ 0.52
HOXB3-212ENST00000498678 PRB2P02812 416 aaPredicted RBP18.29■□□□□ 0.52
HOXB3-212ENST00000498678 TCTAP57738 103 aa18.29■□□□□ 0.52
HOXB3-212ENST00000498678 SPANXA1Q9NS26 97 aa18.28■□□□□ 0.52
HOXB3-212ENST00000498678 RAB37Q96AX2 223 aa18.28■□□□□ 0.52
HOXB3-212ENST00000498678 NAA38Q9BRA0 125 aaKnown RBP18.28■□□□□ 0.52
HOXB3-212ENST00000498678 IGLV4-69A0A075B6H9 119 aa18.27■□□□□ 0.52
HOXB3-212ENST00000498678 GYPEP15421 78 aa18.26■□□□□ 0.51
HOXB3-212ENST00000498678 VCX2Q9H322 139 aa18.26■□□□□ 0.51
HOXB3-212ENST00000498678 SPINK8P0C7L1 97 aa18.25■□□□□ 0.51
HOXB3-212ENST00000498678 PAPPA-AS1Q5QFB9 102 aa18.25■□□□□ 0.51
HOXB3-212ENST00000498678 ATP5G1P05496 136 aa18.25■□□□□ 0.51
HOXB3-212ENST00000498678 SBSPONQ8IVN8 264 aa18.25■□□□□ 0.51
HOXB3-212ENST00000498678 NOTCH1P46531 2555 aa18.25■□□□□ 0.51
HOXB3-212ENST00000498678 AMELXQ99217 191 aa18.24■□□□□ 0.51
HOXB3-212ENST00000498678 WFDC2Q14508 124 aa18.24■□□□□ 0.51
HOXB3-212ENST00000498678 KPRPQ5T749 579 aaPredicted RBP18.24■□□□□ 0.51
HOXB3-212ENST00000498678 TIMM21Q9BVV7 248 aa18.24■□□□□ 0.51
HOXB3-212ENST00000498678 PAX4O43316 350 aa18.23■□□□□ 0.51
HOXB3-212ENST00000498678 C11orf86A6NJI1 115 aa18.23■□□□□ 0.51
HOXB3-212ENST00000498678 ATP6V0E2Q8NHE4 81 aa18.23■□□□□ 0.51
HOXB3-212ENST00000498678 IGKV2D-26A0A0A0MRZ7 120 aa18.22■□□□□ 0.51
HOXB3-212ENST00000498678 K7EIL1 84 aa18.22■□□□□ 0.51
HOXB3-212ENST00000498678 VSIG2Q96IQ7 327 aa18.22■□□□□ 0.51
HOXB3-212ENST00000498678 NMUP48645 174 aa18.21■□□□□ 0.51
HOXB3-212ENST00000498678 TMEM243Q9BU79 118 aa18.21■□□□□ 0.51
HOXB3-212ENST00000498678 RNASE13Q5GAN3 156 aaKnown RBP18.2■□□□□ 0.5
HOXB3-212ENST00000498678 Q6ZUT4 128 aa18.2■□□□□ 0.5
HOXB3-212ENST00000498678 ANAPC13Q9BS18 74 aa18.2■□□□□ 0.5
HOXB3-212ENST00000498678 E9PLD3 99 aa18.2■□□□□ 0.5
HOXB3-212ENST00000498678 TRBV25-1A0A075B6N4 114 aa18.19■□□□□ 0.5
HOXB3-212ENST00000498678 MRPS36P82909 103 aaKnown RBP18.19■□□□□ 0.5
HOXB3-212ENST00000498678 C11orf68Q9H3H3 251 aaKnown RBP18.19■□□□□ 0.5
HOXB3-212ENST00000498678 HIGD1BQ9P298 99 aa18.19■□□□□ 0.5
HOXB3-212ENST00000498678 TRBV6-8A0A0A6YYG3 113 aa18.18■□□□□ 0.5
HOXB3-212ENST00000498678 A0A0J9YY99 117 aa18.18■□□□□ 0.5
HOXB3-212ENST00000498678 F5H768 121 aa18.18■□□□□ 0.5
HOXB3-212ENST00000498678 C12orf74Q32Q52 190 aa18.18■□□□□ 0.5
HOXB3-212ENST00000498678 NFE4Q86UQ8 179 aa18.18■□□□□ 0.5
HOXB3-212ENST00000498678 PCP2Q8IVA1 136 aa18.18■□□□□ 0.5
HOXB3-212ENST00000498678 CSDC2Q9Y534 153 aaKnown RBP18.18■□□□□ 0.5
HOXB3-212ENST00000498678 ETDBQ3ZM63 59 aa18.17■□□□□ 0.5
HOXB3-212ENST00000498678 DGAT2L7PQ6IED9 249 aa18.17■□□□□ 0.5
HOXB3-212ENST00000498678 CDIP1Q9H305 208 aa18.17■□□□□ 0.5
HOXB3-212ENST00000498678 NBEAL1Q6ZS30 2694 aa18.17■□□□□ 0.5
HOXB3-212ENST00000498678 HTN3P15516 51 aa18.16■□□□□ 0.5
HOXB3-212ENST00000498678 A0A0J9YXV3 536 aa18.15■□□□□ 0.5
HOXB3-212ENST00000498678 H7C423 109 aa18.15■□□□□ 0.5
HOXB3-212ENST00000498678 UBE2L6O14933 153 aa18.15■□□□□ 0.5
HOXB3-212ENST00000498678 CHAC1Q9BUX1 264 aa18.15■□□□□ 0.5
HOXB3-212ENST00000498678 DEFB121Q5J5C9 76 aa18.14■□□□□ 0.49
HOXB3-212ENST00000498678 MGAM2Q2M2H8 2515 aa18.14■□□□□ 0.49
HOXB3-212ENST00000498678 SH2D6Q7Z4S9 175 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms