RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 REG3AQ06141 175 aa9.65□□□□□ -0.86
USP11-212ENST00000497179 CLPSL2Q6UWE3 100 aa9.65□□□□□ -0.86
USP11-212ENST00000497179 TM2D2Q9BX73 214 aa9.65□□□□□ -0.86
USP11-212ENST00000497179 TRGC2P03986 189 aa9.64□□□□□ -0.87
USP11-212ENST00000497179 DGAT2L7PQ6IED9 249 aa9.64□□□□□ -0.87
USP11-212ENST00000497179 FA2HQ7L5A8 372 aa9.64□□□□□ -0.87
USP11-212ENST00000497179 CDC42SE2Q9NRR3 84 aa9.64□□□□□ -0.87
USP11-212ENST00000497179 SPANXA1Q9NS26 97 aa9.64□□□□□ -0.87
USP11-212ENST00000497179 COX11Q9Y6N1 276 aa9.64□□□□□ -0.87
USP11-212ENST00000497179 IGKV2D-24A0A075B6R9 120 aa9.63□□□□□ -0.87
USP11-212ENST00000497179 TNP2Q05952 138 aa9.63□□□□□ -0.87
USP11-212ENST00000497179 ZNF664Q8N3J9 261 aa9.63□□□□□ -0.87
USP11-212ENST00000497179 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
USP11-212ENST00000497179 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
USP11-212ENST00000497179 TRAV8-4A0A0B4J246 113 aa9.62□□□□□ -0.87
USP11-212ENST00000497179 PSCAO43653 123 aa9.62□□□□□ -0.87
USP11-212ENST00000497179 G0S2P27469 103 aa9.62□□□□□ -0.87
USP11-212ENST00000497179 C2orf66Q6UXQ4 117 aa9.62□□□□□ -0.87
USP11-212ENST00000497179 Q6ZUT4 128 aa9.62□□□□□ -0.87
USP11-212ENST00000497179 URB1-AS1Q96HZ7 61 aa9.62□□□□□ -0.87
USP11-212ENST00000497179 PYGO1Q9Y3Y4 419 aa9.62□□□□□ -0.87
USP11-212ENST00000497179 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
USP11-212ENST00000497179 FAM104AQ969W3 186 aa9.61□□□□□ -0.87
USP11-212ENST00000497179 RAB5BP61020 215 aa9.6□□□□□ -0.87
USP11-212ENST00000497179 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
USP11-212ENST00000497179 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
USP11-212ENST00000497179 IGLV10-54A0A075B6I4 117 aa9.59□□□□□ -0.87
USP11-212ENST00000497179 A0A087WTM6 91 aa9.59□□□□□ -0.87
USP11-212ENST00000497179 IGKV3OR2-268A0A0C4DH90 116 aa9.59□□□□□ -0.87
USP11-212ENST00000497179 A0A1B0GVY2 172 aa9.59□□□□□ -0.87
USP11-212ENST00000497179 LINC00614P0C842 121 aa9.59□□□□□ -0.87
USP11-212ENST00000497179 MAPKAPK5-AS1Q8N8E1 139 aa9.59□□□□□ -0.87
USP11-212ENST00000497179 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
USP11-212ENST00000497179 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
USP11-212ENST00000497179 LINC00959A0A1B0GUT2 108 aa9.58□□□□□ -0.88
USP11-212ENST00000497179 LRCOL1A6NCL2 159 aa9.58□□□□□ -0.88
USP11-212ENST00000497179 LINC01549A6NIU2 74 aa9.58□□□□□ -0.88
USP11-212ENST00000497179 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
USP11-212ENST00000497179 NPSP0C0P6 89 aa9.58□□□□□ -0.88
USP11-212ENST00000497179 RNASE13Q5GAN3 156 aaKnown RBP9.58□□□□□ -0.88
USP11-212ENST00000497179 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
USP11-212ENST00000497179 EPPK1P58107 5090 aaKnown RBP9.57□□□□□ -0.88
USP11-212ENST00000497179 CHCHD10Q8WYQ3 142 aaPredicted RBP9.57□□□□□ -0.88
USP11-212ENST00000497179 CHCHD1Q96BP2 118 aaKnown RBP9.57□□□□□ -0.88
USP11-212ENST00000497179 TIMM17AQ99595 171 aa9.57□□□□□ -0.88
USP11-212ENST00000497179 A0A096LNJ9 63 aa9.56□□□□□ -0.88
USP11-212ENST00000497179 CCL25O15444 150 aa9.56□□□□□ -0.88
USP11-212ENST00000497179 TMEM141Q96I45 108 aa9.56□□□□□ -0.88
USP11-212ENST00000497179 GAGE12HA6NDE8 117 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 EREGO14944 169 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 HBDP02042 147 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 WFDC2Q14508 124 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 SS18Q15532 418 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 ERASQ7Z444 233 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 BAGE3Q86Y29 109 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 BAALCQ8WXS3 180 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 PKHD1P08F94 4074 aa9.55□□□□□ -0.88
USP11-212ENST00000497179 IFITM10A6NMD0 228 aa9.54□□□□□ -0.88
USP11-212ENST00000497179 C1orf196B1AJZ1 125 aa9.54□□□□□ -0.88
USP11-212ENST00000497179 Q6ZN92 141 aa9.54□□□□□ -0.88
USP11-212ENST00000497179 LINC00173Q6ZV60 143 aa9.54□□□□□ -0.88
USP11-212ENST00000497179 SCGB3A1Q96QR1 104 aa9.54□□□□□ -0.88
USP11-212ENST00000497179 DYNC1H1Q14204 4646 aaKnown RBP9.54□□□□□ -0.88
USP11-212ENST00000497179 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
USP11-212ENST00000497179 TRAV13-1A0A0B4J241 112 aa9.53□□□□□ -0.88
USP11-212ENST00000497179 LECT2O14960 151 aa9.53□□□□□ -0.88
USP11-212ENST00000497179 XCL1P47992 114 aa9.53□□□□□ -0.88
USP11-212ENST00000497179 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
USP11-212ENST00000497179 TEX43Q6ZNM6 134 aa9.53□□□□□ -0.88
USP11-212ENST00000497179 AMELXQ99217 191 aa9.53□□□□□ -0.88
USP11-212ENST00000497179 HIST1H2BKO60814 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST1H2BJP06899 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST1H2BOP23527 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST1H2BBP33778 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST1H2BDP58876 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 LINC00310P59036 64 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST1H2BCP62807 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 FOXI1Q12951 378 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 PMCHL1Q16048 86 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST2H2BEQ16778 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.52□□□□□ -0.89
USP11-212ENST00000497179 CD164L2Q6UWJ8 174 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 Q8N814 137 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST1H2BHQ93079 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST1H2BNQ99877 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 HIST1H2BMQ99879 126 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 C2orf88Q9BSF0 95 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 VCX2Q9H322 139 aa9.52□□□□□ -0.89
USP11-212ENST00000497179 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
USP11-212ENST00000497179 HSBP1O75506 76 aa9.51□□□□□ -0.89
USP11-212ENST00000497179 SERF1AO75920 110 aa9.51□□□□□ -0.89
USP11-212ENST00000497179 UBE2D1P51668 147 aa9.5□□□□□ -0.89
USP11-212ENST00000497179 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
USP11-212ENST00000497179 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
USP11-212ENST00000497179 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
USP11-212ENST00000497179 SPATA12Q7Z6I5 190 aa9.5□□□□□ -0.89
USP11-212ENST00000497179 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.49□□□□□ -0.89
USP11-212ENST00000497179 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
USP11-212ENST00000497179 ATP5LO75964 103 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms