RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 COX6CP09669 75 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 KIF25-AS1Q9Y6Z4 181 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 NXPH4O95158 308 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 MT-ATP8P03928 68 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 C2orf82Q6UX34 121 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 C10orf126Q8N4M7 172 aa9.85□□□□□ -0.83
GPC1-209ENST00000495100 DEFB113Q30KQ7 82 aa9.84□□□□□ -0.83
GPC1-209ENST00000495100 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
GPC1-209ENST00000495100 LINC00158P58513 81 aa9.84□□□□□ -0.83
GPC1-209ENST00000495100 CKS1BP61024 79 aa9.83□□□□□ -0.84
GPC1-209ENST00000495100 RPL36AP83881 106 aaKnown RBP9.83□□□□□ -0.84
GPC1-209ENST00000495100 RPL36ALQ969Q0 106 aaKnown RBP9.83□□□□□ -0.84
GPC1-209ENST00000495100 IGLV10-54A0A075B6I4 117 aa9.83□□□□□ -0.84
GPC1-209ENST00000495100 CRLF1O75462 422 aa9.83□□□□□ -0.84
GPC1-209ENST00000495100 NFE4Q86UQ8 179 aa9.83□□□□□ -0.84
GPC1-209ENST00000495100 TEX49A0A1B0GTD5 131 aa9.83□□□□□ -0.84
GPC1-209ENST00000495100 GATA3P23771 443 aa9.83□□□□□ -0.84
GPC1-209ENST00000495100 CIRBPQ14011 172 aaKnown RBP9.83□□□□□ -0.84
GPC1-209ENST00000495100 A0A0J9YXY3 114 aa9.82□□□□□ -0.84
GPC1-209ENST00000495100 TRBV27A0A0K0K1C4 114 aa9.82□□□□□ -0.84
GPC1-209ENST00000495100 FOXI1Q12951 378 aa9.82□□□□□ -0.84
GPC1-209ENST00000495100 DSCR9P59020 149 aa9.82□□□□□ -0.84
GPC1-209ENST00000495100 TAL2Q16559 108 aa9.82□□□□□ -0.84
GPC1-209ENST00000495100 ADAMTSL4-AS1Q5T5F5 129 aa9.82□□□□□ -0.84
GPC1-209ENST00000495100 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
GPC1-209ENST00000495100 TIMM17AQ99595 171 aa9.82□□□□□ -0.84
GPC1-209ENST00000495100 Q6YL49 198 aa9.81□□□□□ -0.84
GPC1-209ENST00000495100 IGHV3-30P01768 117 aa9.81□□□□□ -0.84
GPC1-209ENST00000495100 IGHV3-30-5P0DP03 117 aa9.81□□□□□ -0.84
GPC1-209ENST00000495100 PIK3CD-AS1Q5SR53 167 aa9.81□□□□□ -0.84
GPC1-209ENST00000495100 CFAP126Q5VTH2 177 aa9.81□□□□□ -0.84
GPC1-209ENST00000495100 LGALS9O00182 355 aa9.81□□□□□ -0.84
GPC1-209ENST00000495100 TTC32Q5I0X7 151 aa9.81□□□□□ -0.84
GPC1-209ENST00000495100 SLC25A29Q8N8R3 303 aa9.81□□□□□ -0.84
GPC1-209ENST00000495100 PDZD2O15018 2839 aa9.8□□□□□ -0.84
GPC1-209ENST00000495100 DNAJC9-AS1A6NH13 148 aa9.8□□□□□ -0.84
GPC1-209ENST00000495100 C9orf85Q96MD7 179 aa9.8□□□□□ -0.84
GPC1-209ENST00000495100 DEFB114Q30KQ6 69 aa9.8□□□□□ -0.84
GPC1-209ENST00000495100 POM121L12Q8N7R1 296 aa9.8□□□□□ -0.84
GPC1-209ENST00000495100 VWFP04275 2813 aa9.8□□□□□ -0.84
GPC1-209ENST00000495100 LEPROTO15243 131 aa9.79□□□□□ -0.84
GPC1-209ENST00000495100 COL6A5A8TX70 2615 aa9.79□□□□□ -0.84
GPC1-209ENST00000495100 TRBV7-9A0A0J9YWB2 115 aa9.79□□□□□ -0.84
GPC1-209ENST00000495100 XCL1P47992 114 aa9.79□□□□□ -0.84
GPC1-209ENST00000495100 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
GPC1-209ENST00000495100 EIF4EBP3O60516 100 aaPredicted RBP9.79□□□□□ -0.84
GPC1-209ENST00000495100 SNCGO76070 127 aa9.79□□□□□ -0.84
GPC1-209ENST00000495100 ZNF843Q8N446 348 aa9.79□□□□□ -0.84
GPC1-209ENST00000495100 TMEM101Q96IK0 257 aa9.79□□□□□ -0.84
GPC1-209ENST00000495100 COX6A2Q02221 97 aa9.78□□□□□ -0.84
GPC1-209ENST00000495100 C1QTNF4Q9BXJ3 329 aa9.78□□□□□ -0.84
GPC1-209ENST00000495100 PAX4O43316 350 aa9.78□□□□□ -0.84
GPC1-209ENST00000495100 LINC00482Q8N8I6 264 aa9.78□□□□□ -0.84
GPC1-209ENST00000495100 RHOHQ15669 191 aa9.77□□□□□ -0.84
GPC1-209ENST00000495100 ODF3L2Q3SX64 289 aa9.77□□□□□ -0.84
GPC1-209ENST00000495100 TRIAP1O43715 76 aa9.77□□□□□ -0.85
GPC1-209ENST00000495100 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
GPC1-209ENST00000495100 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
GPC1-209ENST00000495100 Q9HAA7 133 aa9.77□□□□□ -0.85
GPC1-209ENST00000495100 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
GPC1-209ENST00000495100 ANAPC13Q9BS18 74 aa9.76□□□□□ -0.85
GPC1-209ENST00000495100 MED14OSP0DP75 135 aa9.75□□□□□ -0.85
GPC1-209ENST00000495100 ATXN8Q156A1 80 aa9.75□□□□□ -0.85
GPC1-209ENST00000495100 LINC00526Q96FQ7 95 aa9.75□□□□□ -0.85
GPC1-209ENST00000495100 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
GPC1-209ENST00000495100 XGP55808 180 aa9.75□□□□□ -0.85
GPC1-209ENST00000495100 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
GPC1-209ENST00000495100 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
GPC1-209ENST00000495100 TRAV8-4A0A0B4J246 113 aa9.74□□□□□ -0.85
GPC1-209ENST00000495100 TEN1Q86WV5 123 aa9.74□□□□□ -0.85
GPC1-209ENST00000495100 FAM19A4Q96LR4 140 aa9.74□□□□□ -0.85
GPC1-209ENST00000495100 CLUHP3Q96NS8 147 aa9.74□□□□□ -0.85
GPC1-209ENST00000495100 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
GPC1-209ENST00000495100 LINC01620Q4KN68 170 aa9.74□□□□□ -0.85
GPC1-209ENST00000495100 J3QLI3 93 aa9.73□□□□□ -0.85
GPC1-209ENST00000495100 ATP5G1P05496 136 aa9.73□□□□□ -0.85
GPC1-209ENST00000495100 C6orf226Q5I0X4 101 aa9.73□□□□□ -0.85
GPC1-209ENST00000495100 UBE2D1P51668 147 aa9.73□□□□□ -0.85
GPC1-209ENST00000495100 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
GPC1-209ENST00000495100 ICOSQ9Y6W8 199 aa9.73□□□□□ -0.85
GPC1-209ENST00000495100 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
GPC1-209ENST00000495100 GAGE2EQ4V326 116 aa9.72□□□□□ -0.85
GPC1-209ENST00000495100 GAGE2DQ9UEU5 116 aa9.72□□□□□ -0.85
GPC1-209ENST00000495100 TRAV26-1A0A087WT03 109 aa9.72□□□□□ -0.85
GPC1-209ENST00000495100 UBE2D4Q9Y2X8 147 aa9.72□□□□□ -0.85
GPC1-209ENST00000495100 TMEM89A2RUT3 159 aa9.71□□□□□ -0.85
GPC1-209ENST00000495100 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.71□□□□□ -0.85
GPC1-209ENST00000495100 TMEM243Q9BU79 118 aa9.71□□□□□ -0.85
GPC1-209ENST00000495100 BAHCC1Q9P281 2608 aa9.71□□□□□ -0.86
GPC1-209ENST00000495100 TENM4Q6N022 2769 aa9.71□□□□□ -0.86
GPC1-209ENST00000495100 DEFB135Q30KP9 77 aa9.71□□□□□ -0.86
GPC1-209ENST00000495100 C1orf158Q8N1D5 194 aa9.71□□□□□ -0.86
GPC1-209ENST00000495100 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
GPC1-209ENST00000495100 DNAL4O96015 105 aa9.7□□□□□ -0.86
GPC1-209ENST00000495100 TENM1Q9UKZ4 2725 aa9.7□□□□□ -0.86
GPC1-209ENST00000495100 C15orf53Q8NAA6 179 aa9.7□□□□□ -0.86
GPC1-209ENST00000495100 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
GPC1-209ENST00000495100 CHCHD7Q9BUK0 85 aa9.7□□□□□ -0.86
GPC1-209ENST00000495100 TRBV6-5A0A0K0K1A5 114 aa9.69□□□□□ -0.86
GPC1-209ENST00000495100 K7EQD1 137 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms